EWM27876.1, cds2799 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27876.1 vs. NCBI_GenBank
Match: gi|553183864|ref|XP_005853981.1| (ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [Nannochloropsis gaditana CCMP526] >gi|422295080|gb|EKU22379.1| ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [Nannochloropsis gaditana CCMP526] >gi|585110206|gb|EWM27876.1| Ankyrin repeat-containing domain protein [Nannochloropsis gaditana]) HSP 1 Score: 808.52 bits (2087), Expect = 0.000e+0 Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0
Query: 1 MSGKNKKQGLFLSLLSRKPSREELVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVLVKAEKMWAERKKEDRETDREETKEEEVMGLSEHPALSGTVGGDEKTTAELSSSTGTKLAAPGTRMGKEVAARSLPSSTTRPVSESGGSTEKPDSSTAGPSSPPSSPSSFTFSSSSSSPLSSGVARLAGPTGVASSKTSSNHVEATQTLSPAPPTTPSKKTDLPACLRWQVEEGVGEGGHEGRWGAWEEAEEDWLEVHPAVFSKRGPRVGRRRREGGGAGSWVLGCLRRNKTLMNLATGRTGERIKARAGSRRNPRWVVQKE 403
MSGKNKKQGLFLSLLSRKPSREELVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVLVKAEKMWAERKKEDRETDREETKEEEVMGLSEHPALSGTVGGDEKTTAELSSSTGTKLAAPGTRMGKEVAARSLPSSTTRPVSESGGSTEKPDSSTAGPSSPPSSPSSFTFSSSSSSPLSSGVARLAGPTGVASSKTSSNHVEATQTLSPAPPTTPSKKTDLPACLRWQVEEGVGEGGHEGRWGAWEEAEEDWLEVHPAVFSKRGPRVGRRRREGGGAGSWVLGCLRRNKTLMNLATGRTGERIKARAGSRRNPRWVVQKE
Sbjct: 1 MSGKNKKQGLFLSLLSRKPSREELVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVLVKAEKMWAERKKEDRETDREETKEEEVMGLSEHPALSGTVGGDEKTTAELSSSTGTKLAAPGTRMGKEVAARSLPSSTTRPVSESGGSTEKPDSSTAGPSSPPSSPSSFTFSSSSSSPLSSGVARLAGPTGVASSKTSSNHVEATQTLSPAPPTTPSKKTDLPACLRWQVEEGVGEGGHEGRWGAWEEAEEDWLEVHPAVFSKRGPRVGRRRREGGGAGSWVLGCLRRNKTLMNLATGRTGERIKARAGSRRNPRWVVQKE 403
BLAST of EWM27876.1 vs. NCBI_GenBank
Match: gi|553195439|ref|XP_005856146.1| (ATP-binding cassette, subfamily C (CFTR/MRP), member 1, partial [Nannochloropsis gaditana CCMP526] >gi|422292913|gb|EKU20214.1| ATP-binding cassette, subfamily C (CFTR/MRP), member 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 803.897 bits (2075), Expect = 0.000e+0 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0
Query: 9 GLFLSLLSRKPSREELVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVLVKAEKMWAERKKEDRETDREETKEEEVMGLSEHPALSGTVGGDEKTTAELSSSTGTKLAAPGTRMGKEVAARSLPSSTTRPVSESGGSTEKPDSSTAGPSSPPSSPSSFTFSSSSSSPLSSGVARLAGPTGVASSKTSSNHVEATQTLSPAPPTTPSKKTDLPACLRWQVEEGVGEGGHEGRWGAWEEAEEDWLEVHPAVFSKRGPRVGRRRREGGGAGSWVLGCLRRNKTLMNLATGRTGERIKARAGSRRNPRWVVQKE 403
GLFLSLLSRKPSREELVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVLVKAEKMWAERKKEDRETDREETKEEEVMGLSEHPALSGTVGGDEKTTAELSSSTGTKLAAPGTRMGKEVAARSLPSSTTRPVSESGGSTEKPDSSTAGPSSPPSSPSSFTFSSSSSSPLSSGVARLAGPTGVASSKTSSNHVEATQTLSPAPPTTPSKKTDLPACLRWQVEEGVGEGGHEGRWGAWEEAEEDWLEVHPAVFSKRGPRVGRRRREGGGAGSWVLGCLRRNKTLMNLATGRTGERIKARAGSRRNPRWVVQKE
Sbjct: 1598 GLFLSLLSRKPSREELVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVLVKAEKMWAERKKEDRETDREETKEEEVMGLSEHPALSGTVGGDEKTTAELSSSTGTKLAAPGTRMGKEVAARSLPSSTTRPVSESGGSTEKPDSSTAGPSSPPSSPSSFTFSSSSSSPLSSGVARLAGPTGVASSKTSSNHVEATQTLSPAPPTTPSKKTDLPACLRWQVEEGVGEGGHEGRWGAWEEAEEDWLEVHPAVFSKRGPRVGRRRREGGGAGSWVLGCLRRNKTLMNLATGRTGERIKARAGSRRNPRWVVQKE 1992
BLAST of EWM27876.1 vs. NCBI_GenBank
Match: gi|803081425|ref|XP_012034852.1| (PREDICTED: ankyrin-2 isoform X18 [Ovis aries]) HSP 1 Score: 82.8037 bits (203), Expect = 2.929e-13 Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 24 LVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVL 142
L + D + +L K GVD + L G TPLI+A G+ K+V +LL Q G N+NA+ + G+T L++AA GH HI++ L+Q GA P AT+ +T +A+++G+ + VD L
Sbjct: 718 LAAQEDKVNVADVLTKHGVDQDAHTKL---GYTPLIVACHYGNVKMVNFLLKQ-GANVNAKTKNGYTPLHQAAQQGHTHIINVLLQHGAKPN--ATTANGNTALAIAKRLGYISVVDTL 830
BLAST of EWM27876.1 vs. NCBI_GenBank
Match: gi|803081445|ref|XP_012034862.1| (PREDICTED: ankyrin-2 isoform X27 [Ovis aries]) HSP 1 Score: 82.8037 bits (203), Expect = 2.955e-13 Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 24 LVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVL 142
L + D + +L K GVD + L G TPLI+A G+ K+V +LL Q G N+NA+ + G+T L++AA GH HI++ L+Q GA P AT+ +T +A+++G+ + VD L
Sbjct: 710 LAAQEDKVNVADVLTKHGVDQDAHTKL---GYTPLIVACHYGNVKMVNFLLKQ-GANVNAKTKNGYTPLHQAAQQGHTHIINVLLQHGAKPN--ATTANGNTALAIAKRLGYISVVDTL 822
BLAST of EWM27876.1 vs. NCBI_GenBank
Match: gi|803081419|ref|XP_012034849.1| (PREDICTED: ankyrin-2 isoform X16 [Ovis aries]) HSP 1 Score: 82.8037 bits (203), Expect = 3.063e-13 Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 24 LVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVL 142
L + D + +L K GVD + L G TPLI+A G+ K+V +LL Q G N+NA+ + G+T L++AA GH HI++ L+Q GA P AT+ +T +A+++G+ + VD L
Sbjct: 680 LAAQEDKVNVADVLTKHGVDQDAHTKL---GYTPLIVACHYGNVKMVNFLLKQ-GANVNAKTKNGYTPLHQAAQQGHTHIINVLLQHGAKPN--ATTANGNTALAIAKRLGYISVVDTL 792
BLAST of EWM27876.1 vs. NCBI_GenBank
Match: gi|803081413|ref|XP_012034846.1| (PREDICTED: ankyrin-2 isoform X13 [Ovis aries]) HSP 1 Score: 82.8037 bits (203), Expect = 3.064e-13 Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 24 LVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVL 142
L + D + +L K GVD + L G TPLI+A G+ K+V +LL Q G N+NA+ + G+T L++AA GH HI++ L+Q GA P AT+ +T +A+++G+ + VD L
Sbjct: 718 LAAQEDKVNVADVLTKHGVDQDAHTKL---GYTPLIVACHYGNVKMVNFLLKQ-GANVNAKTKNGYTPLHQAAQQGHTHIINVLLQHGAKPN--ATTANGNTALAIAKRLGYISVVDTL 830
BLAST of EWM27876.1 vs. NCBI_GenBank
Match: gi|803081427|ref|XP_012034853.1| (PREDICTED: ankyrin-2 isoform X19 [Ovis aries]) HSP 1 Score: 82.8037 bits (203), Expect = 3.090e-13 Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 24 LVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVL 142
L + D + +L K GVD + L G TPLI+A G+ K+V +LL Q G N+NA+ + G+T L++AA GH HI++ L+Q GA P AT+ +T +A+++G+ + VD L
Sbjct: 652 LAAQEDKVNVADVLTKHGVDQDAHTKL---GYTPLIVACHYGNVKMVNFLLKQ-GANVNAKTKNGYTPLHQAAQQGHTHIINVLLQHGAKPN--ATTANGNTALAIAKRLGYISVVDTL 764
BLAST of EWM27876.1 vs. NCBI_GenBank
Match: gi|803081415|ref|XP_012034847.1| (PREDICTED: ankyrin-2 isoform X14 [Ovis aries]) HSP 1 Score: 82.8037 bits (203), Expect = 3.091e-13 Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 24 LVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVL 142
L + D + +L K GVD + L G TPLI+A G+ K+V +LL Q G N+NA+ + G+T L++AA GH HI++ L+Q GA P AT+ +T +A+++G+ + VD L
Sbjct: 685 LAAQEDKVNVADVLTKHGVDQDAHTKL---GYTPLIVACHYGNVKMVNFLLKQ-GANVNAKTKNGYTPLHQAAQQGHTHIINVLLQHGAKPN--ATTANGNTALAIAKRLGYISVVDTL 797
BLAST of EWM27876.1 vs. NCBI_GenBank
Match: gi|803081421|ref|XP_012034850.1| (PREDICTED: ankyrin-2 isoform X17 [Ovis aries] >gi|803081423|ref|XP_012034851.1| PREDICTED: ankyrin-2 isoform X17 [Ovis aries]) HSP 1 Score: 82.8037 bits (203), Expect = 3.119e-13 Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 24 LVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVL 142
L + D + +L K GVD + L G TPLI+A G+ K+V +LL Q G N+NA+ + G+T L++AA GH HI++ L+Q GA P AT+ +T +A+++G+ + VD L
Sbjct: 674 LAAQEDKVNVADVLTKHGVDQDAHTKL---GYTPLIVACHYGNVKMVNFLLKQ-GANVNAKTKNGYTPLHQAAQQGHTHIINVLLQHGAKPN--ATTANGNTALAIAKRLGYISVVDTL 786
BLAST of EWM27876.1 vs. NCBI_GenBank
Match: gi|803081391|ref|XP_012034835.1| (PREDICTED: ankyrin-2 isoform X2 [Ovis aries]) HSP 1 Score: 82.8037 bits (203), Expect = 3.121e-13 Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 24 LVRKGDLPALTKLLRKQGVDNTLNAPLDHEGNTPLILAARKGSFKVVQWLLAQEGLNMNARNRFGWTALYEAAGTGHRHILDRLVQAGADPTIPATSWPRHTPSQMARQMGWNACVDVL 142
L + D + +L K GVD + L G TPLI+A G+ K+V +LL Q G N+NA+ + G+T L++AA GH HI++ L+Q GA P AT+ +T +A+++G+ + VD L
Sbjct: 718 LAAQEDKVNVADVLTKHGVDQDAHTKL---GYTPLIVACHYGNVKMVNFLLKQ-GANVNAKTKNGYTPLHQAAQQGHTHIINVLLQHGAKPN--ATTANGNTALAIAKRLGYISVVDTL 830 The following BLAST results are available for this feature:
BLAST of EWM27876.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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