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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100094g11.6802.mrna |
| Orig protein id | gnl|cribi|Naga_100094g11.6802 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1269805..1272541 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2806 ID=rna2806|Name=rna2806|organism=Nannochloropsis gaditana|type=mRNA|length=1259bp
ACTTAGTAGGGAAAAAGAATAGCAGGAATTCTGCAAAACCTTTGTCGCCC
TCTGGGACCAACGCCAAAAGTTTACGGAACAAATCTTGGAGGCTTTTTTC
CCCATTTTTTTTGATAATTTTGCCATCTTCTCAACACCAACAGGCTTTGC
GTGACACAGCACAATATAAATTACTTCTTTAATCAGCCATATGGTGGTAC
TTCATGTCAAACGGTCAGATGGAGACGAGTTTTTGTACGAGACTACATGT
GAAACAAAAAATGAAGACCTAATCCAGGACTTGGTATGGGTGTGGAACGC
CCGCCTACTCTTGCAGCGTCTCGTCAATATGGTGCAAAGTATCCCTCAAG
AGCCTGATGAGCTTGGCGTGCGAAGCAACAGTAGCGAGGACATCACACCT
AGAAAGGACGTACTAGTTCGGGTGGCGTTTGATGCGGAAGCGTACTTAGG
CAGTAACAGCACAAGTCAAGAGGAGAAAAAGACTGGAGATGATGGAACTT
TACAGGTAAATAAACCCAAAAAACCACAACACGCTATGTCTCGCACTCTG
CTTCAAGAACAACTGGACAACTTCCATGGCGCTATCGAGTCTGCCTCTCC
TTCGGTCTCGTCTCCCCTGGCGACGTCTTTTAACCAAAACGTGAAACAAA
GCGATGGCACCAAAGACGTGGTATTGGCCGAGATGTCACGTGTAATTAGA
AGTGGAAGGTCTCCAACCCTACTCCAGGCTCTTTCTTCATGTGAGGCGAA
CAAGGCAAATAGTGCTAACAATCCTGAGCAGGATGGGAGCCTTTCGGGTC
TTGACCCCACAACCGCACGACTGTGGGCCATGGGGAAAAAATTCGTGCGT
GAGAAAACAGTTGGAGAACAATTGGGTGGCTGTCGCAATGAGAAGACCAA
GATTGTTGTCAAGCTAGCAGGGCCTGGCCAAGGTCCTCCAGTGCGTGAGC
CCGTAGTCAGGGAGGAAGAGAGGTTGGCAATGTTGGCACACTACTTTAAA
AGGCAAGAGGAGCTGAAAAGACTAGCTGAGGCTGAGGATGACGAATACCT
GCATGCTGAATGGGCGGATGGAAAACAATTGCAGCGGGGTCTGCGGGGTG
TAGGAGACGTCGGAGCGCCTGGCATTGGAGGCGTTCGGTAAGATGATTAG
CGCTTGATGACGACGTATAGAGATACTAAAAAGCTCTCATATAAGTAGAT
CTAGAAGCTGGAAAATGTTAAGATTCTTCAACGGAGAAGCAATCAATCTT
TTTGAGACC back to topprotein sequence of rna2806 >rna2806-protein ID=rna2806-protein|Name=rna2806|organism=Nannochloropsis gaditana|type=polypeptide|length=160bp
MKNCCLEVRAFLPMTGSPQNDPCELPSEERLTKRRFPCVCLLAFLHLGWL
VESSVAWSGYPAAWKESNYGSMKSFHVPFDVGRSQQPVDARLPGPAWRRC
SRCRMENTLHLVQADASAPGNAREMLTLDSLGRMFCRPGDRPLLAATLPR
PPPKSHGLVC back to topmRNA from alignment at CM002459.1:1269805..1272541+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2806 ID=rna2806|Name=rna2806|organism=Nannochloropsis gaditana|type=mRNA|length=2737bp|location=Sequence derived from alignment at CM002459.1:1269805..1272541+ (Nannochloropsis gaditana)
GAAAGAGGTGGACATCTGTCGTGTGCTTCGAGTCCTTGTATTGCCGCCAA
GCCTACTCTGTGATTTACTCACGGGAATAGACTGAGTCGAGGTCCTGTCA
GGCATTGTTCTCGGTCCTTCACAAAGAAGTTCACCTTCGTTGCTCATATG
AGCACCGTTGGCTAGTACAGCCGAAGATGTAGCGGACATGGCCGCGGCGG
GCTCTGCCGGGGTGTGAAATGAGTGCGATTGAGTATTTTTAGTACATTCC
CGCGTCTCTGAGAACGGTAAGAGATGGGTCGCAGGGTTTCGGGGTGCTGA
AGCGGACGCAGGCGCAAAAATTCTGTTCTCGGCCGCCTGTGAGGACTGGG
CAGAAGAAGCAGCAGTACATGAATCTAGTAGCGCAGTAATCAGTGACACC
CACAGCAAACGGCTTTGTGCGCTAGGTGCGCGGAAATTATACCGTGCCGT
GTACGTGGCTCGATCCTCATCCCCAGGAAAGACGCTCAAGCCAGGATATT
TGGCATCTAGCGCGGCACCAGAGGAGGCCCTTACGATAAGGTCAAAGCGT
CGACCAGCCCACTGGGCATCGCTAGGGCATTCAATTTTCTCTAGCAAGCG
CAACTCCAATGCGCCTTTCTCATGTAAAGGTATGCAGCCCCATGCTGCAG
GGACGGAGCTTTGATAAAAGCGTATCTCCTGAGAGCCTGCGTAGAGCACT
AGATGAAATGGGACCCAAGACATGAGTAGCCCCCCTAAGGAGCGAGACGG
TGACCACAGTTCCATGTTTCCCTCGAGTAAGACCCGATTTTGCGCCCTGT
TGTTGTTGGCCAATGCGCTCATCGCCTGGTCTTGAGCCatctggaggagg
ctttgcaaATGAGGGCGCGCCGTGCCGGAAAGCTGGTCGAGTCCCTCCAT
GACGCTTCGTAACGCGGGGTCTACGGGACGTGTGTCTTTATTTCTATCCC
CTATTGCTCCTTTGCGCCAGTAGGTGTTACccgtggggagggatgaagaa
tTGCTGTCTCGAGGTACGAGCATTCCTCCCCATGACAGGCTCTCCTCAAA
ATGACCCGTGCGAGCTTCCTTCCGAAGAACGTTTGACCAAGCGCAGGTTT
CCCTGTGTTTGTCTTCTGGCGTTCCTTCATCTTGGTTGGCTTGTAGAGAG
CAGTGTTGCTTGGAGCGGCTACCCTGCCGCTTGGAAAGAGAGTAATTACG
GTTCCATGAAAAGCTTCCACGTCCCTTTCGACGTGGGGAGGAGTCAGCAG
CCCGTCGACGCTCGACTTCCAGGTCCTGCCTGGAGACGTTGCTCTCGGTG
TAGGATGGAGAATACACTGCATCTCGTGCAGGCCGATGCTTCCGCGCCGG
GGAACGCAAGGGAGATGCTGACCCTTGATTCCCTCGGTAGAATGTTCTGT
CGTCCGGGAGACCGTCCACTTCTAGCCGCGACTttgccaaggcctccgcc
caAGTCTCATGGCCTCGTTTGCTGATGATTGTCGTatgttccccctcctc
ctcttcatcgtcatcctcttcttcctccattttctgcTGTTCTCGGCCCC
ATCGGATGCTTTTCCGGCTAGACCGTCCTCTCCTATTGTCAAGGGCTGAA
TGTGCAGGTTCATGGCTCCGTCGATAATATTTACTCGCTGCTCTCGAGGT
ATTTTTACCTCCCAAGCGAAAGAAATCCCGAATGCTTTGTGTAAGCTGTG
GGCTTACGAAAGGGTGGTCAGAgtaagaagagggagggctgcgGCCCTGA
TAGTGATCTCGACGCTTGGAGTGCGACCCGTGAGGGTAATGATGGTAATT
GCGATTTCGGTGTCGTCTGTCGGCATAagccctgtccctctcgTCATCGC
TACTGCTACTGCAGGACTCCCACTGACcactgctgcagctgctacAGTCA
TACGCCACCCTTTTGTCTGCCCGGGGCACGTCCGCGTGCGCGAAGCGATT
TGCTTTTTCGGCGCCTTTTGTCTTGTGACGAGAAGCGCCAGTCTTAAAGC
AGTCGACGTGGGTTTTTATGTGATGGGTATGTGATgaatggggggaaagg
ttTCGCCCCTCACGCGGGCTATTGCTACGTCGTGGGCTCGAATTGATGGT
TCGATGGCGCGAACGTGTTgcactctccttcctctcctctgcttctACGT
CGCCGCTATTTAATGGATAATGGTGATGTTGGTGGTCACGAGTGACTGCC
GCCAcatcctcattctcctcATCCTTATTGCCGGTAATATTACTGTCATG
ATGTGGCACAGCGGGTTCCTCCTCTGTCAAGTTCTCCCGTGGAGGAGACT
GGCATAGTGGTGACTTGCGAGCCCTATACGCCTTTCCCTTGGGTATTTCA
GACGACATCTGTCTCATCTGCTTCTTACTTTGCCATTTATAGATCGCAGC
AGCCCTGTGATCGCTCTCAGCTTTCATGATTTCACACGTTACGAGGCGCT
CGAATTCGTCTTGGGTGTAGCTTGTTTTGCCTAGACCTTCAAGTATCTGC
ACAAATTGCGATGCTCCAACCTCTAGACGTAACCAATGAACTAGAGTAGC
AGTGTCCACTGTGCCGTCTGCTCTGCGACGGCACTTTTTAAAAGTCTCTA
AAAGAGCTATGGGATCGCTGGCCTCCATTAGACAATGTCGACCCCTGCCG
ACCGTTttatgttttttttttcctgaaaACAACGTAAGGGAAGAATGatt
tttcaatttttaaTCTTTTTAAGAATATTGATAGTGG back to topCoding sequence (CDS) from alignment at CM002459.1:1269805..1272541+ >rna2806 ID=rna2806|Name=rna2806|organism=Nannochloropsis gaditana|type=CDS|length=483bp|location=Sequence derived from alignment at CM002459.1:1269805..1272541+ (Nannochloropsis gaditana)
atgaagaatTGCTGTCTCGAGGTACGAGCATTCCTCCCCATGACAGGCTC
TCCTCAAAATGACCCGTGCGAGCTTCCTTCCGAAGAACGTTTGACCAAGC
GCAGGTTTCCCTGTGTTTGTCTTCTGGCGTTCCTTCATCTTGGTTGGCTT
GTAGAGAGCAGTGTTGCTTGGAGCGGCTACCCTGCCGCTTGGAAAGAGAG
TAATTACGGTTCCATGAAAAGCTTCCACGTCCCTTTCGACGTGGGGAGGA
GTCAGCAGCCCGTCGACGCTCGACTTCCAGGTCCTGCCTGGAGACGTTGC
TCTCGGTGTAGGATGGAGAATACACTGCATCTCGTGCAGGCCGATGCTTC
CGCGCCGGGGAACGCAAGGGAGATGCTGACCCTTGATTCCCTCGGTAGAA
TGTTCTGTCGTCCGGGAGACCGTCCACTTCTAGCCGCGACTttgccaagg
cctccgcccaAGTCTCATGGCCTCGTTTGCTGA back to top
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