EWM27867.1, cds2798 (CDS) Nannochloropsis gaditana

Overview
NameEWM27867.1
Unique Namecds2798
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1270797..1271279 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27867.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100094g11.6802.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1270797..1271279 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27867.1 vs. NCBI_GenBank
Match: gi|585110197|gb|EWM27867.1| (hypothetical protein Naga_100094g11 [Nannochloropsis gaditana])

HSP 1 Score: 328.946 bits (842), Expect = 3.631e-114
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 
Query:    1 MKNCCLEVRAFLPMTGSPQNDPCELPSEERLTKRRFPCVCLLAFLHLGWLVESSVAWSGYPAAWKESNYGSMKSFHVPFDVGRSQQPVDARLPGPAWRRCSRCRMENTLHLVQADASAPGNAREMLTLDSLGRMFCRPGDRPLLAATLPRPPPKSHGLVC 160
            MKNCCLEVRAFLPMTGSPQNDPCELPSEERLTKRRFPCVCLLAFLHLGWLVESSVAWSGYPAAWKESNYGSMKSFHVPFDVGRSQQPVDARLPGPAWRRCSRCRMENTLHLVQADASAPGNAREMLTLDSLGRMFCRPGDRPLLAATLPRPPPKSHGLVC
Sbjct:    1 MKNCCLEVRAFLPMTGSPQNDPCELPSEERLTKRRFPCVCLLAFLHLGWLVESSVAWSGYPAAWKESNYGSMKSFHVPFDVGRSQQPVDARLPGPAWRRCSRCRMENTLHLVQADASAPGNAREMLTLDSLGRMFCRPGDRPLLAATLPRPPPKSHGLVC 160
The following BLAST results are available for this feature:
BLAST of EWM27867.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110197|gb|EWM27867.1|3.631e-114100.00hypothetical protein Naga_100094g11 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2806rna2806Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications