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Properties
| Property Name | Value |
|---|
| Product | srp72 |
| Orig transcript id | gnl|cribi|Naga_100323g4.1696.mrna |
| Orig protein id | gnl|cribi|Naga_100323g4.1696 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1244847..1248102 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2798 ID=rna2798|Name=rna2798|organism=Nannochloropsis gaditana|type=mRNA|length=789bp
CATGTGAATTTGGCTGTGTACGAGATTGGAGAGGGTTGTTTTTTAGTATT
AGACTGGTAAAGGATAGAGACTTCCGTCCAAAAAATGCATCATGTATTCC
ACTCCTGTGCTCATCCTGTCAAAACTTTGCTCCCACCAACAGTACATTCA
AGAAAAGTCATGGCCGCATGGCGTGCTTCCATCTCCAAGCACGTTCGTGA
GCTCCGTTTTCTCATAAGCGCTTCTGAGGAAAGCAGCGCCGCCGCGCGCT
CTTACATCAGGCACAACTATGACGAGCTGAAAATGCTGAACCCCACTACC
CCTTTCCTCGTACGCGATGGCTGGCCAGGAAAAGATCCTTACGTGGTTGC
CACATATGACTGGGGAAAAGAAGTGATAAAAACCATGGGCGGCTTGGACG
AGAAGGGCATCGATGCCTTGTTAAAAGGCTTAGTCGAGGATGGGAAAAGC
CTTCCGAAATACACACATCCGCCGCTGAGGGGTACGCCGGACGCCATCGT
GGACGCTTTGCCACGGGACGTATTCTACTGAGCAAAGAATGTTATTTTTG
TGCGAGTCCCTGTGACAAGGAACCGGAAAGAGAAGGCCAGAAGTAGGAAT
GGAAAGGGGGCGAGACGCAGGTGTCGGAGTCGGGAGGCCGATGAAAGATA
ATGGCAAAACCAGAAAAACAACTCTCGGGGGGAAAATCGTTCCTTGCCAT
CGTAGCCCCCACGCATTGAAAAGATTTCAGTATTTCAGGCCCGGTGGGAG
GGCCCCCGTAACTTCTCATCTCTCCCTCCCCACCCCCCG back to topprotein sequence of rna2798 >rna2798-protein ID=rna2798-protein|Name=rna2798|organism=Nannochloropsis gaditana|type=polypeptide|length=731bp
MMGWLIVFRIRPGAKELSESGSYLFRIMAQAPVAPSAELQDLYATLYHAL
EEEAFEEVLSAADAVLKSAPDELEARAAKAAAALHTGDYALALTTALPAQ
DFERAYALYRLGRGSEALAVLDGSPEQNEISFRHLRGQVLFKEGRYDEAI
EVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSRFPLEAELRE
TSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNE
GSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAA
LKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRL
DDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQRAATDPAGD
LQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLES
IPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPPSLPPPFLAKL
LRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAM
SWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERR
TLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKY
DASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAML
DVASRVEAEKKKGDEDGRGGVKMGGGRRRRK back to topmRNA from alignment at CM002459.1:1244847..1248102- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2798 ID=rna2798|Name=rna2798|organism=Nannochloropsis gaditana|type=mRNA|length=3256bp|location=Sequence derived from alignment at CM002459.1:1244847..1248102- (Nannochloropsis gaditana)
ATGATGGGATGGCTGATTGTCTTCAGAATCAGGCCAGGGGCTAAGGAATT
GTCTGAGTCGGGATCTTACCTCTTGTGAGCCTCTTCGATGCAAAACAAAT
ATTTGTCAGCTGCTGTAACTGATAATGCAGCATTAGAATTGCCTTTGTTG
ATACATTTATTCTACTTGTTGTGTCAAGTAACTCGGAAAGGAAATCATTT
TCAGGCAATTTTAAGTGTCAGTGGTGTCTTAGGCAAGCCGAAGGGGAAAA
AAGCGACAGCTGACGGCCGGAGGCGCGAGGACCATGGAAGTCTTGCAATG
CCTCGAGCGCTTTGTCTTTATGTACAAGTGCGCAGCCATACAAGCCTTTA
GTTGCTACATTTACGTGTGTATTTGTAGCTTATATCGTGCTTGTACGTAT
GTAAGGTTGGTGCAGTTGTATTGACGATGGTGTGCAGGCCTTAAAAAACA
AGAAATAGGTTTGGAAGCCACTGTCAAAGCAGACTTGTGTCGGTGTCAAT
GGCTTTGACTCTGCTGCGCCAATCTGCAGATGCTGTGGGCATAATATCAT
TGTAAAAGATCCTTGATGGTAGAAGACAGGGCATATTTTCACGGACCACG
TTCGCGCCTCCCTCTACAAGGCAAGACGACCATAGCCTCGTTCGTATGGA
AGTCTTCCTGTGTCTGTACTTGTCGATGCACATCAAAGTTATGTACAAAG
GCGATCTGCAAGCTCGTTGGGATTCTCAGCTCTGGCTCGTCTTTCGCAGA
TCTGCGCCTCGTTGATCGCCTTGACACCTTTCTCTCACCTCCACATCGAC
CATCCCCCTCCAGTCGCATCATGGCACAAGCCCCTGTGGCCCCGTCGGCG
GAGCTTCAAGATCTCTACGCGACGCTCTACCATGCACTGGAAGAGGAAGC
TTTTGAAGAGGTGCTGTCTGCCGCTGACGCAGTTCTGAAAAGCGCGCCCG
ACGAGCTGGAAGCCCGGGCAGCAAAGGCAGCAGCAGCCCTGCACACAGGG
GACTATGCTCTTGCCTTAACCACGGCACTTCCAGCTCAGGATTTCGAACG
AGCCTATGCATTGTACAGACTGGGACGAGGTTCTGAGGCCTTGGCTGTCT
TGGACGGAAGTCCCGAGCAGAATGAAATATCCTTTCGGCATTTGCGGGGC
CAAGTCTTATTCAAAGAAGGCCGATATGATGAGGCCATTGAGGTGTTCTC
GGCTCTGGTCGAGGAGGGACGCAAGGCGGGAGACGAGGAGGATGTCGAGC
TGCTGACCAATCTGTACGCGGCCTTCGTGGCAGCCCGTCGCGGCCAGGAG
GCTTTATCTCGTTTTCCCCTGGAGGCAGAGCTGCGTGAGACCTCCTACGA
GTTGGCTTTCAATTCCGGTGCCGCCCTCGTCGACACGGGCGACCTGAGTG
CCGCTGAAGCGCGTCTGCGGGAAGCTTTGAATGTCTGCGAGCGACTGGGG
TTGGAAGAGGAGATGTCGCCTGTGGACATCCTGAACGAAGGGAGCGGGAT
TCGACAGGAGCTGGCTTACGTCTTGGCCTCCCAGGGACGACGCCGGGAGG
GCCTGGAGATGGTGTCGACGCTGACAAAGAAAGCGAACAAGCTCTCGGAC
CCTGTGGTCCGCGCCTCTGCGATGATTACCGCGGCAGCTTTGAAGGGCGG
TAGGGGCCAGACCAAGGCGCAAGGCGGTTTGAACAAGTTGCAGGCAGCCT
TAGAGGAGGCCGGGCCCAAAATGATACCCGGACAGAGCATTTTGCTCCGA
GTGAACGAGGCGCTGATGCTGGTGCATTCTGGCAGGCTGGACGACGCGGA
AAAGGCGGTGGCCGCGCTCAAGAAGGAGGCAGCTTCGGCGACGGCAAAGG
GGGGAGGACAGGCCCCGGGGACCTGGCGTGTGGCCCTGGTCGAGGTCGCG
ATCAAGATGCAAAGGGCCGCGACCGACCCCGCGGGAGACCTCCAAACCCT
GTTCCAGACCGTGCAAGCCATGGCGCGTGGCTCCCCGTCGCAGGACAGCG
TCGACGCCGAGCAACAAGTGGGCACGGCCTGGGCCCAGTGCCTGGTCTAT
CAGGGAAAACTGCGCGAAGCCGCCCAAGTGCTGGAATCCATACCGTCCCT
GCAAGGATACCCGGCTGTGGTCGCCACCGTGGCTTCCATTTACGCCAAAC
TCGGCTTGGAGGAGGAAGTGCTGGCCACATTCGACCGTGCCGTCTCCTCC
TTCCCGCCCTCTCTTCCTCCTCCCTTCCTTGCCAAGCTGTTGCGGGGAAC
TGCGGCCCTCCGCCGAGCCAAAGGGGATCAAGCAGGGGCCGCGACGGCCT
TGCGCGCGCTTTTGGACTCGGACAAGCTCAAGGGAGAGCTGGACAGCGAC
GTGAGGCTCCGCACGCTGGCAGACTTGGTCATGGCAATGTCGTGGGTGGA
CGGAGAAGAAGCAGGGAAAATCGCAGAGGCGGAGCTGCCGGCGGTGGAAG
GGGAAGGAGGGAACGAGGACGAGGAGGTGGACGCCAGCATTCTAGAGGAG
GCCGGGCTGCCTCGACGGCAGGGGGGAGGAGAACGGCGGACGCTGCCGCC
CGGCGCGGCCCCTGGGGGCCAGAAGGAAAAAGAGGAGGAAGAGCAAGCCA
AAGCAGCGAAAAAAGCCGAAGTCCGGAGGCGGCAACGGGCCCGAGCTCGA
ACCGTTTATTTGGCGAAACTAACGGCTGAGGGGAAATACGACGCCAGTCG
TCCCGGCCCTCCACCAGACCCTGAGCGATGGATTGCCAAGAATCAACGCT
CGTACAACAAGCGTGGCAAGAAAGGGAGAGGCAAATTTGTGGGTGCTCAA
GGTTCAGGGAACGGAGCAGCCAGGGACGCGGCCATGCTGGATGTGGCAAG
CCGGGTGGAAGCGGAGAAGAAGAAAGGGGACGAGGACGGCAGGGGTGGCG
TGAAAATGGGGGGTGGAAGAAGGCGGAGGAAGTGAGAGAAAGATTCCTGC
CTAGGACGACGGGGAAATGCGTTGAAGCGATACGGGGGGTGGGGAGGGAG
AGATGAGAAGTTACGGGGGCCCTCCCACCGGGCCTGAAATACTGAAATCT
TTTCAATGCGTGGGGGCTACGATGGCAAGGAACGATTTTCCCCCCGAGAG
TTGTTTTTCTGGTTTTGCCATTATCTTTCATCGGCCTCCCGACTCCGACA
CCTGCGTCTCGCCCCCTTTCCATTCCTACTTCTGGCCTTCTCTTTCCGGT
TCCTTGTCACAGGGACTCGCACAAAAATAACATTCTTTGCTCAGTAGAAT
ACGTCC back to topCoding sequence (CDS) from alignment at CM002459.1:1244847..1248102- >rna2798 ID=rna2798|Name=rna2798|organism=Nannochloropsis gaditana|type=CDS|length=4392bp|location=Sequence derived from alignment at CM002459.1:1244847..1248102- (Nannochloropsis gaditana)
TCGCATCATGGCACAAGCCCCTGTGGCCCCGTCGGCGGAGCTTCAAGATC
TCTACGCGACGCTCTACCATGCACTGGAAGAGGAAGCTTTTGAAGAGGTG
CTGTCTGCCGCTGACGCAGTTCTGAAAAGCGCGCCCGACGAGCTGGAAGC
CCGGGCAGCAAAGGCAGCAGCAGCCCTGCACACAGGGGACTATGCTCTTG
CCTTAACCACGGCACTTCCAGCTCAGGATTTCGAACGAGCCTATGCATTG
TACAGACTGGGACGAGGTTCTGAGGCCTTGGCTGTCTTGGACGGAAGTCC
CGAGCAGAATGAAATATCCTTTCGGCATTTGCGGGGCCAAGTCTTATTCA
AAGAAGGCCGATATGATGAGGCCATTGAGGTGTTCTCGGCTCTGGTCGAG
GAGGGACGCAAGGCGGGAGACGAGGAGGATGTCGAGCTGCTGACCAATCT
GTACGCGGCCTTCGTGGCAGCCCGTCGCGGCCAGGAGGCTTTATCTCGTT
TTCCCCTGGAGGCAGAGCTGCGTGAGACCTCCTACGAGTTGGCTTTCAAT
TCCGGTGCCGCCCTCGTCGACACGGGCGACCTGAGTGCCGCTGAAGCGCG
TCTGCGGGAAGCTTTGAATGTCTGCGAGCGACTGGGGTTGGAAGAGGAGA
TGTCGCCTGTGGACATCCTGAACGAAGGGAGCGGGATTCGACAGGAGCTG
GCTTACGTCTTGGCCTCCCAGGGACGACGCCGGGAGGGCCTGGAGATGGT
GTCGACGCTGACAAAGAAAGCGAACAAGCTCTCGGACCCTGTGGTCCGCG
CCTCTGCGATGATTACCGCGGCAGCTTTGAAGGGCGGTAGGGGCCAGACC
AAGGCGCAAGGCGGTTTGAACAAGTTGCAGGCAGCCTTAGAGGAGGCCGG
GCCCAAAATGATACCCGGACAGAGCATTTTGCTCCGAGTGAACGAGGCGC
TGATGCTGGTGCATTCTGGCAGGCTGGACGACGCGGAAAAGGCGGTGGCC
GCGCTCAAGAAGGAGGCAGCTTCGGCGACGGCAAAGGGGGGAGGACAGGC
CCCGGGGACCTGGCGTGTGGCCCTGGTCGAGGTCGCGATCAAGATGCAAA
GGGCCGCGACCGACCCCGCGGGAGACCTCCAAACCCTGTTCCAGACCGTG
CAAGCCATGGCGCGTGGCTCCCCGTCGCAGGACAGCGTCGACGCCGAGCA
ACAAGTGGGCACGGCCTGGGCCCAGTGCCTGGTCTATCAGGGAAAACTGC
GCGAAGCCGCCCAAGTGCTGGAATCCATACCGTCCCTGCAAGGATACCCG
GCTGTGGTCGCCACCGTGGCTTCCATTTACGCCAAACTCGGCTTGGAGGA
GGAAGTGCTGGCCACATTCGACCGTGCCGTCTCCTCCTTCCCGCCCTCTC
TTCCTCCTCCCTTCCTTGCCAAGCTGTTGCGGGGAACTGCGGCCCTCCGC
CGAGCCAAAGGGGATCAAGCAGGGGCCGCGACGGCCTTGCGCGCGCTTTT
GGACTCGGACAAGCTCAAGGGAGAGCTGGACAGCGACGTGAGGCTCCGCA
CGCTGGCAGACTTGGTCATGGCAATGTCGTGGGTGGACGGAGAAGAAGCA
GGGAAAATCGCAGAGGCGGAGCTGCCGGCGGTGGAAGGGGAAGGAGGGAA
CGAGGACGAGGAGGTGGACGCCAGCATTCTAGAGGAGGCCGGGCTGCCTC
GACGGCAGGGGGGAGGAGAACGGCGGACGCTGCCGCCCGGCGCGGCCCCT
GGGGGCCAGAAGGAAAAAGAGGAGGAAGAGCAAGCCAAAGCAGCGAAAAA
AGCCGAAGTCCGGAGGCGGCAACGGGCCCGAGCTCGAACCGTTTATTTGG
CGAAACTAACGGCTGAGGGGAAATACGACGCCAGTCGTCCCGGCCCTCCA
CCAGACCCTGAGCGATGGATTGCCAAGAATCAACGCTCGTACAACAAGCG
TGGCAAGAAAGGGAGAGGCAAATTTGTGGGTGCTCAAGGTTCAGGGAACG
GAGCAGCCAGGGACGCGGCCATGCTGGATGTGGCAAGCCGGGTGGAAGCG
GAGAAGAAGAAAGGGGACGAGGACGGCAGGGGTGGCGTGAAAATGGGGGG
TGGAAGAAGGCGGAGGAAGTGAATGATGGGATGGCTGATTGTCTTCAGAA
TCAGGCCAGGGGCTAAGGAATTGTCTGAGTCGGGATCTTACCTCTTTCGC
ATCATGGCACAAGCCCCTGTGGCCCCGTCGGCGGAGCTTCAAGATCTCTA
CGCGACGCTCTACCATGCACTGGAAGAGGAAGCTTTTGAAGAGGTGCTGT
CTGCCGCTGACGCAGTTCTGAAAAGCGCGCCCGACGAGCTGGAAGCCCGG
GCAGCAAAGGCAGCAGCAGCCCTGCACACAGGGGACTATGCTCTTGCCTT
AACCACGGCACTTCCAGCTCAGGATTTCGAACGAGCCTATGCATTGTACA
GACTGGGACGAGGTTCTGAGGCCTTGGCTGTCTTGGACGGAAGTCCCGAG
CAGAATGAAATATCCTTTCGGCATTTGCGGGGCCAAGTCTTATTCAAAGA
AGGCCGATATGATGAGGCCATTGAGGTGTTCTCGGCTCTGGTCGAGGAGG
GACGCAAGGCGGGAGACGAGGAGGATGTCGAGCTGCTGACCAATCTGTAC
GCGGCCTTCGTGGCAGCCCGTCGCGGCCAGGAGGCTTTATCTCGTTTTCC
CCTGGAGGCAGAGCTGCGTGAGACCTCCTACGAGTTGGCTTTCAATTCCG
GTGCCGCCCTCGTCGACACGGGCGACCTGAGTGCCGCTGAAGCGCGTCTG
CGGGAAGCTTTGAATGTCTGCGAGCGACTGGGGTTGGAAGAGGAGATGTC
GCCTGTGGACATCCTGAACGAAGGGAGCGGGATTCGACAGGAGCTGGCTT
ACGTCTTGGCCTCCCAGGGACGACGCCGGGAGGGCCTGGAGATGGTGTCG
ACGCTGACAAAGAAAGCGAACAAGCTCTCGGACCCTGTGGTCCGCGCCTC
TGCGATGATTACCGCGGCAGCTTTGAAGGGCGGTAGGGGCCAGACCAAGG
CGCAAGGCGGTTTGAACAAGTTGCAGGCAGCCTTAGAGGAGGCCGGGCCC
AAAATGATACCCGGACAGAGCATTTTGCTCCGAGTGAACGAGGCGCTGAT
GCTGGTGCATTCTGGCAGGCTGGACGACGCGGAAAAGGCGGTGGCCGCGC
TCAAGAAGGAGGCAGCTTCGGCGACGGCAAAGGGGGGAGGACAGGCCCCG
GGGACCTGGCGTGTGGCCCTGGTCGAGGTCGCGATCAAGATGCAAAGGGC
CGCGACCGACCCCGCGGGAGACCTCCAAACCCTGTTCCAGACCGTGCAAG
CCATGGCGCGTGGCTCCCCGTCGCAGGACAGCGTCGACGCCGAGCAACAA
GTGGGCACGGCCTGGGCCCAGTGCCTGGTCTATCAGGGAAAACTGCGCGA
AGCCGCCCAAGTGCTGGAATCCATACCGTCCCTGCAAGGATACCCGGCTG
TGGTCGCCACCGTGGCTTCCATTTACGCCAAACTCGGCTTGGAGGAGGAA
GTGCTGGCCACATTCGACCGTGCCGTCTCCTCCTTCCCGCCCTCTCTTCC
TCCTCCCTTCCTTGCCAAGCTGTTGCGGGGAACTGCGGCCCTCCGCCGAG
CCAAAGGGGATCAAGCAGGGGCCGCGACGGCCTTGCGCGCGCTTTTGGAC
TCGGACAAGCTCAAGGGAGAGCTGGACAGCGACGTGAGGCTCCGCACGCT
GGCAGACTTGGTCATGGCAATGTCGTGGGTGGACGGAGAAGAAGCAGGGA
AAATCGCAGAGGCGGAGCTGCCGGCGGTGGAAGGGGAAGGAGGGAACGAG
GACGAGGAGGTGGACGCCAGCATTCTAGAGGAGGCCGGGCTGCCTCGACG
GCAGGGGGGAGGAGAACGGCGGACGCTGCCGCCCGGCGCGGCCCCTGGGG
GCCAGAAGGAAAAAGAGGAGGAAGAGCAAGCCAAAGCAGCGAAAAAAGCC
GAAGTCCGGAGGCGGCAACGGGCCCGAGCTCGAACCGTTTATTTGGCGAA
ACTAACGGCTGAGGGGAAATACGACGCCAGTCGTCCCGGCCCTCCACCAG
ACCCTGAGCGATGGATTGCCAAGAATCAACGCTCGTACAACAAGCGTGGC
AAGAAAGGGAGAGGCAAATTTGTGGGTGCTCAAGGTTCAGGGAACGGAGC
AGCCAGGGACGCGGCCATGCTGGATGTGGCAAGCCGGGTGGAAGCGGAGA
AGAAGAAAGGGGACGAGGACGGCAGGGGTGGCGTGAAAATGGGGGGTGGA
AGAAGGCGGAGGAAGTGAATGATGGGATGGCTGATTGTCTTCAGAATCAG
GCCAGGGGCTAAGGAATTGTCTGAGTCGGGATCTTACCTCTT back to top
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