EWM27885.1, cds2790 (CDS) Nannochloropsis gaditana

Overview
NameEWM27885.1
Unique Namecds2790
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1248029..1248102 -
Alignment locationCM002459.1:1245168..1247289 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27885.1
Productsrp72
Orig transcript idgnl|cribi|Naga_100323g4.1696.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1248029..1248102 -
CM002459.1supercontigCM002459.1:1245168..1247289 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom
IPR026270SRP72
Homology
BLAST of EWM27885.1 vs. NCBI_GenBank
Match: gi|585110216|gb|EWM27885.1| (srp72 [Nannochloropsis gaditana])

HSP 1 Score: 1443.33 bits (3735), Expect = 0.000e+0
Identity = 731/731 (100.00%), Postives = 731/731 (100.00%), Query Frame = 0
Query:    1 MMGWLIVFRIRPGAKELSESGSYLFRIMAQAPVAPSAELQDLYATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAALHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSPEQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSRFPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAMLDVASRVEAEKKKGDEDGRGGVKMGGGRRRRK 731
            MMGWLIVFRIRPGAKELSESGSYLFRIMAQAPVAPSAELQDLYATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAALHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSPEQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSRFPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAMLDVASRVEAEKKKGDEDGRGGVKMGGGRRRRK
Sbjct:    1 MMGWLIVFRIRPGAKELSESGSYLFRIMAQAPVAPSAELQDLYATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAALHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSPEQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSRFPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAMLDVASRVEAEKKKGDEDGRGGVKMGGGRRRRK 731          
BLAST of EWM27885.1 vs. NCBI_GenBank
Match: gi|553186056|ref|XP_005854352.1| (signal recognition particle subunit SRP72 [Nannochloropsis gaditana CCMP526] >gi|553195405|ref|XP_005856139.1| signal recognition particle subunit SRP72 [Nannochloropsis gaditana CCMP526] >gi|422292906|gb|EKU20207.1| signal recognition particle subunit SRP72 [Nannochloropsis gaditana CCMP526] >gi|422294705|gb|EKU22005.1| signal recognition particle subunit SRP72 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1386.7 bits (3588), Expect = 0.000e+0
Identity = 704/704 (100.00%), Postives = 704/704 (100.00%), Query Frame = 0
Query:   28 MAQAPVAPSAELQDLYATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAALHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSPEQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSRFPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAMLDVASRVEAEKKKGDEDGRGGVKMGGGRRRRK 731
            MAQAPVAPSAELQDLYATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAALHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSPEQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSRFPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAMLDVASRVEAEKKKGDEDGRGGVKMGGGRRRRK
Sbjct:    1 MAQAPVAPSAELQDLYATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAALHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSPEQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSRFPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAMLDVASRVEAEKKKGDEDGRGGVKMGGGRRRRK 704          
BLAST of EWM27885.1 vs. NCBI_GenBank
Match: gi|298705854|emb|CBJ28999.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 200.29 bits (508), Expect = 2.708e-51
Identity = 218/735 (29.66%), Postives = 345/735 (46.94%), Query Frame = 0
Query:   38 ELQDLYATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAALHTGDYALALTTALPAQDF----ERAYALYRLGRGSEAL--------AVLDGSPEQNEISFRHLRGQVLFKEGRYDEAIEVFSALVE-EGRKAGDEEDVELLTNLYAAFVAARRGQEALSRFPLEAELRE--TSYELAFNSGAALVDT-----GDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPK-MIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIP-SLQGYPAVVATVASIYAKLGLEEEVLATFDRAV---SSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDG----EEAGKIA-EAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQR---------ARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAMLDVASRVEAEKKKGDEDGR--GGVKMG--GGRRR 729
            E Q ++  +   L+ E F++ +   + V   +PD+++A   K    +H   Y  AL +A          ERAY L+RLGR  EAL         V  G   +   + RHL  Q L++ GR+ EA EV+ ++ E E R+ G      +  N+ AA+  A  G++AL    +E  + E    +EL +N G ALV        D +AAE+ L++A   C    +    S  +  +E S +R +LAY  +  G+     E ++ + +  ++ SDP V   +    AAL G + Q +A   L +L+AA+ E   K ++  Q    R N+ L+L+  G+ ++    + A++              P +     +E A+  +R      G+  ++ +    +A+  P       E  +    AQ    +  L  AA+ LE +  ++ G PA  + +A +Y  +G  E+  A   RA    S     L     A+ L G A     +G    AA   + LL   +L  ELD D+R++  A LV+A S+ D     EEA K+   A+  ++EG        +D   LE   LPR                   K ++     KA++KAE R+ +R         A+ R  Y+AKL  +GK D ++P P PDPERWI ++ R+Y KRG+K R KFVGAQGSG+GAA+D A LD  +R +A++   ++      GV +G  GG+RR
Sbjct:   13 ESQRVWREVRACLQNEDFDKAVQLCNTVRSKSPDDIDAIRVKCLCLIHQDKYDKALQSASGKHKAVLSPERAYCLFRLGRLEEALEVSRAGESGVSGGGDSKRARALRHLEAQALYRLGRHGEAAEVYCSIAEDEERRTGGGGFPPVSVNVAAAYAGAGCGEKALGALSVEEAMEEEGAPWELLYNLGTALVQRRGGAGDDTAAAESCLQQAEEACRESLVALGHSDAEAADEASMVRSQLAYAASRAGKTAAAAEQLNQVVR--SRPSDPAVSLVSTANLAALGGYKDQQEA---LKRLKAAMSEKSEKGLLSKQLEACRFNKCLLLLQCGKTEECRDELEAVRS-----------AYPNSDLGPRIEAALLSKRG---KGGEASSVLKA--HLAKAKPGSKE---EVSLKLCVAQLYATENDLTLAAETLEGVGGAVSGTPAAASALAGLYLGMGDTEKAAAVVVRAAEAASRGDHDLEGDEQARALLGMADWLHDQGFHRQAADTYQKLL---RLGAELDGDLRIQAQASLVIAYSYFDSGKSEEEASKLPYNADFGSIEG--------LDPLALEMTELPR-----------------SSKARKLVLVDKASQKAERRQNKRDPEAILKKRAKKRAKYIAKLVEDGKIDPTKPVPKPDPERWIPRSHRAYGKRGRK-RNKFVGAQGSGDGAAKDTAKLDALARAQAKQAASEKAAVLPPGVAIGKRGGKRR 694          
BLAST of EWM27885.1 vs. NCBI_GenBank
Match: gi|325188526|emb|CCA23060.1| (signal recognition particle putative [Albugo laibachii Nc14])

HSP 1 Score: 171.4 bits (433), Expect = 9.896e-41
Identity = 187/658 (28.42%), Postives = 301/658 (45.74%), Query Frame = 0
Query:   70 PDELEARAAKAAAALHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLD--GSP-EQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDV-ELLTNLYAAFVAARRGQEALSRFPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIY---AKLGLEEEVLATFDRAVSSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARDAAMLDVASRVEAEKKKGDEDGRGG 720
            PD ++ +   +   L   D AL L         E+ Y  YRL + +  LA L     P ++   +  H+  Q+L++ G Y + IE++  L E    A   ED+ E+ TNL AA  +        S+   E +L + ++E+A+N     +   D + AEA L +A  +  R  L+E+ +  +I +E + +R +LAYV   +G   E +     + K  N    PV  A A      ++  R    +   +  L+ ++     KM   Q   +  N+A++L    + +D  K V  L +           + P T  V+ + V +    A TD +       Q +Q       +  SVD   ++G A+ +  ++QGKL EAAQ + SI S+Q  P  VAT+  I     K  L E++L +   A+     +       K+  G    +  K     AA A + LLD++     +D+  RLR LA  V+ +S+ D E+A K   A LP +  E  N+D      I  E   P+ +         P A     K+ + +   K+ ++     RQRA+ R  YLA L +   Y+ S     PDPERWI + QR+ +KR ++GR +FVGAQG+G    +DA  LD A+R  A+++  + D R G
Sbjct:  328 PDAIKIKCI-SLIRLENFDKALELAQKYAFLSTEKLYCSYRLKKDNVTLAELKKYNCPLDEKPKAILHIEAQLLYRMGEYAKCIEIYEYLREH---AMTHEDILEIETNLMAAHASGNYSVSYNSQSKFE-DLDKGNHEVAYNKAFMPMHAQDWNRAEAILADAKRL-YRESLDEDATTSEIDHEMAHLRTQLAYVRQMKGDFDEAVNNYRDVIKARN----PVASAVATNNLVVIRKDRDLLDSLKKIKSLEGSV--VLSKMSLQQQRAVHYNKAVILCLLNKPEDCLKCVQDLME-----------RFPDTSGVSGILVTL----ANTDSSPHASKALQMLQ-------NDKSVDG--RLGLAYLK--IFQGKLEEAAQCIMSIDSIQHTPGTVATLVCILEAAHKADLVEQLLTS---ALQHQDQTRCLDSALKIREGMCIYKLKKKKYEDAALAFKKLLDNEG-GHPIDASSRLRFLASFVICLSYTDPEKA-KNQCAMLPGI-SEVSNKD-----PIELERLAPKSKKI-------PKAVTSMDKKNDIKRHKKSTEQIA---RQRAKKREAYLADLRSREDYNPSIGLLNPDPERWIPRKQRASSKRSRRGRNRFVGAQGAGMTTEKDAMRLDAAARAAAKQQNENADKRNG 926          
BLAST of EWM27885.1 vs. NCBI_GenBank
Match: gi|1214691166|gb|OWZ06160.1| (Signal recognition particle [Phytophthora megakarya])

HSP 1 Score: 167.162 bits (422), Expect = 4.706e-40
Identity = 197/661 (29.80%), Postives = 298/661 (45.08%), Query Frame = 0
Query:   43 YATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAA--LHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVL-DGSPEQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSR-FPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVA--LVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPP-SLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARD 696
            ++ L  AL+ E +  V+   + +    PD+++A   K  A   L   D AL L         E+AY LYRL +  EAL VL  G  E    +  HL  Q+ F++G YD++I ++  L    ++  D   +EL TNL AA+ +A R QE   R  P+E       +E+AFN     + +GD   AE  L+ A  +C    + E  S  +I  E + I+ +LA+V   +G     L     + K   KL +  V   A      ++  R    +   L  + AA+     K+ P Q   +  N  L+L    ++++  + +  L+K           Q P +  +A  +V +AIK Q     PA  +  L        RG  S          G   A   + +G + +AA+ + SI  L   P  VAT+ ++Y + G         + A++             K+  G    +  K     AA A   LL+ +   G LD D+RLR++A LV+A+S+ D E A +   A LP V+  G      VD S LE      +Q     R     A  G +K     E+ +AAK      R+RA+ R  +LA L +   Y+AS     PDPERWI + QRS+ KRG++GR +FVGAQGSG G  +D
Sbjct:   11 FSELNAALKRENYARVVDICNKIRSKFPDDVDAVKVKCVALIRLEKFDKALELAVKYEFLSTEKAYCLYRLKKDDEALNVLVGGDLEMQSTAQLHLAAQMHFRKGDYDQSIRIYELLFSRAQEGDDL--LELQTNLLAAYASAGRSQELKEREIPIE-----DGFEVAFNKSFVAIQSGDWKMAEELLQTAERLCRDTFVSEGASEAEIDEEVAVIKTQLAFVKQMRGDLDGALSDYRNVLKL--KLRNRAVGVVASNNIVTIRKDRDVLDSLKRLKSIDAAV--LSDKLNPEQQEAILTNRTLLLCLVNKVEECRENLQVLRK-----------QFPESKSIADIVVLLAIKDQ----SPAAAIDQL--------RGDMSVGG-------GLGLAHVYLTEGLVVKAAECIRSIEQLAHSPGTVATLVALYEQAGDSGTAEIVLETALAHHKAGDYTSEQAMKIREGDCWYKIQKKQYREAANAYLELLEGET-AGALDRDLRLRSMASLVVALSFFDAE-AAEARCAMLPTVKESG------VDPSELE------KQAPRSARLATKFADTGDKKS----ERKRAAKSPASIARKRAKRREAHLANLRSRSDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGSGMGTEKD 612          
BLAST of EWM27885.1 vs. NCBI_GenBank
Match: gi|695448778|ref|XP_009535069.1| (hypothetical protein PHYSODRAFT_318537 [Phytophthora sojae] >gi|348670386|gb|EGZ10208.1| hypothetical protein PHYSODRAFT_318537 [Phytophthora sojae])

HSP 1 Score: 167.162 bits (422), Expect = 4.817e-40
Identity = 198/661 (29.95%), Postives = 305/661 (46.14%), Query Frame = 0
Query:   43 YATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAA--LHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSP-EQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSR-FPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVA--LVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRA-VSSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARD 696
            ++ L  AL+ E +   +   + +    PD+++A   K  A   L   D AL L         E+AY LYRL +  +AL +L G   E    +  HL  Q+ F++G YD++I ++  L+  G +  D   +EL TNL AA+ +A R QE   R  P++       +E+AFN     + + D  AAE  L  A  +C    + E  S  +I  E + I+ +LAYV   +G   + L     + K   KL +  V A A      ++  R    +   L  +  A+     K+ P Q   +  N  L+L    + ++  +++ ALKK           Q P +  +A  +V +AIK Q     P   ++ L             QD +    ++G   A   + +G + +AA+ + SI  L   P  VAT+ ++Y + G      A  +RA +     +       K+  G    +  K     AA A   LL+ +   G +D D+RLR++A LV+A+S+ D E A +   A LPAVE  G      VD S LE      +Q     R     A  G +K     E+ +AAK  E   R+RA+ R  +L KL +   Y+AS     PDPERWI + QRS+ KRG++GR +FVGAQG+G G  +D
Sbjct:   15 FSELNAALKRENYSRAVDICNKIRSKLPDDVDAVKVKCVALIRLEKFDKALELAVKYDFLSTEKAYCLYRLKQDDDALKLLGGGDLETQSTAQLHLAAQLHFRKGDYDQSIRIYELLLSRGPEGDDL--LELQTNLLAAYASAGRSQELKDREIPID-----DGFEVAFNKSFVAIQSSDWEAAEELLLTAERLCCDTFVAEGASEAEIEEEVAVIKTQLAYVKQMRGNLDDALSDYRNVLKL--KLRNRAVGAVASNNIVTIRQDRDVLDSFKRLKNIDTAV--LSDKLNPTQQEAILTNRTLLLCLMNKTEECRESLEALKK-----------QFPASKSIADIVVLLAIKDQ----SPGAAIEQL-------------QDDMSVGGRLG--LAHVYLTEGHVLKAAECIRSIEELAHSPGTVATLVALYEQAGDSASAQAVLERALIHHRAGNYTSEQAMKIREGDCWYKIQKKQYREAADAYLELLEGET-AGAMDRDLRLRSMASLVVALSFCDAE-AAEARCAMLPAVEESG------VDPSELE------KQAPRSNRLAAKFADTGDKKN----ERKRAAKSPESIARKRAKRREAHLTKLRSRPDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKD 616          
BLAST of EWM27885.1 vs. NCBI_GenBank
Match: gi|673047329|ref|XP_008877625.1| (hypothetical protein H310_12379 [Aphanomyces invadans] >gi|574466788|gb|ETV93815.1| hypothetical protein H310_12379 [Aphanomyces invadans])

HSP 1 Score: 165.622 bits (418), Expect = 1.249e-39
Identity = 202/665 (30.38%), Postives = 301/665 (45.26%), Query Frame = 0
Query:   36 SAELQDLYATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAALHTG--DYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSPEQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSRFPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEA-GPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVALVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQC-LVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPPSLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARD 696
            + ++Q L+  L   L+ E +++ +   + +   AP++ +A   KA   L TG  D AL +   +   + ERAY  Y+L +  +AL VL    E    S  HL  Q  ++   ++ AI ++ AL+     + D   VEL TNL AA+VAA RG E  +R  LE E    SYE+AFN     +  GD+ AA  +LR A  +C      E  S  +I  E + IR + AYV    G     LE   T  + A   +D  + A A    A ++  +    +   L +L++   +    K    Q  ++  N AL+L    + D+A  AV AL    A          P    +AL E          DP+  L +L +T+    +GS +   +     +  A   C L + GK   AA  L  IP +Q  P  VAT+ ++Y      +   A  D AV+    ++       LL G    +  +G  A AA A   LLD      +++ + R+R LA  V+A+S+VD   A   A A LPA           + +S L    L RR        +    AP  + +K+E          E   R+RA+ +  ++A L A+  Y+       PDPERWI + QRS  +RG+K RGKFVGAQGSG GA +D
Sbjct:    2 ATDVQALFVELQTQLQRENYQKAIDTCNKIRAKAPNDTDAIRVKAQCLLRTGKFDKALEIAQNVKGLELERAYCHYKLKQVEKALEVLSDMAEPKSKSALHLEAQAHYRLNNFNAAIRIYEALLSNAHASDDT--VELKTNLIAAYVAAGRGAELQAR-GLETE---DSYEIAFNKSLVALQAGDVVAAGDQLRHADQLCRDSLKAEGYSSAEIEQEAAVIRVQEAYVAQITGGEDRALE---TFRQVAKSSADTGLVAVAQNNIATIQRSKDLFDS---LKRLRSVTNDTLREKCSSAQHQVILANTALVLALMHKYDEARDAVDAL----AQLFPDSAYLPPLQLHLALAE---------EDPSA-LPSLVETL----KGSKTSSGL-----LALAHLHCRLGHPGK---AADALRLIPEIQHTPGTVATLVALYDAALDAKSSAAIVDAAVNHSSSAV-------LLEGDGIAKLRQGQYAEAAAAFARLLDL----SDVEPERRVRCLAYCVVALSYVDPSGASTRA-ATLPA-----------IQSSNLSVEDLVRRAPRPRAPAVVTALAPKEKAKKKENR--------ERVLRKRAKRKAQFIASLKAKPDYNPLIGLVNPDPERWIPRKQRS--RRGRKNRGKFVGAQGSGMGAQKD 595          
BLAST of EWM27885.1 vs. NCBI_GenBank
Match: gi|301113890|ref|XP_002998715.1| (signal recognition particle, putative [Phytophthora infestans T30-4] >gi|262112016|gb|EEY70068.1| signal recognition particle, putative [Phytophthora infestans T30-4])

HSP 1 Score: 160.229 bits (404), Expect = 9.901e-38
Identity = 196/663 (29.56%), Postives = 305/663 (46.00%), Query Frame = 0
Query:   43 YATLYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAA--LHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSP-EQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSR-FPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVA--LVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVG--TAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPP-SLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARD 696
            ++ L  A++ E +   +   + +    PD+++A   K  A   L   D AL L         E+AY LYRL +  +AL +L+G   E       HL  Q+ F++G YD++I ++  L+  G++  D   +EL TNL AA+ +A + QE   R  P++       +E+AFN     + +GD  AAE  L  A  +C      E  +  +I  E + I+ +LA+V   +G     L     + K   KL +  V A A      ++  R    +   L  + A++       +  ++IL   N AL+L    + +D   ++  LKK           Q P +  +A  +V +AIK Q A                    G+  Q  +  +  VG     A   + +G++ ++A+ + SI  L   P  VAT+ ++Y + G      A  + A++             K+  G    +  K     AA A   LL+ +   G LD D+RLR++A LV+A+S+ D  EA +   A LPAVE  G      VD S LE+  +PR         L    A  G K+ E +   +AAK  E   R+RA+ R  +LA L A   Y+AS     PDPERWI + QRS+ KRG++GR +FVGAQG+G G  +D
Sbjct:    9 FSELNAAVKRENYSRAVDICNKIRSKFPDDIDAVKVKCVALIRLEKLDKALELAVKYDFLSMEKAYCLYRLKQDDDALKLLEGGDLETQNTPQLHLAAQLHFRKGNYDQSIRIYELLLSRGQEGDDL--LELQTNLLAAYASAGKSQELKDREIPID-----DGFEVAFNKSFVAIQSGDWEAAEELLLTAERLCRDTFGAEGATEAEIEEEVAVIKTQLAFVKQMRGDLDGALSDYRDVLKL--KLRNRAVGAVASNNIVTIRKDRDVLDSFKRLKNIDASVLSDKLSSVQREAIL--TNRALLLCLLNKTEDCRDSLETLKK-----------QFPSSKSIADIVVLLAIKNQSAT-------------------GAIEQ--LQGDMSVGGRLGLAHVYLTEGQVVKSAECIRSIEQLAHSPGTVATLVALYEQAGDSASAQAVLESALAHHKAGDYTSEQAMKIREGDCWYKIQKKQYREAADAYLELLEGET-AGTLDRDLRLRSMASLVVALSFCDA-EAAEARCAMLPAVEESG------VDPSELEKQ-VPRST------RLAAKFADTGDKKNERK---RAAKSPEAIARKRAKRREAHLANLRARPDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKD 610          
BLAST of EWM27885.1 vs. NCBI_GenBank
Match: gi|568045395|gb|ETM42551.1| (hypothetical protein L914_11820 [Phytophthora parasitica])

HSP 1 Score: 156.377 bits (394), Expect = 2.259e-36
Identity = 201/658 (30.55%), Postives = 307/658 (46.66%), Query Frame = 0
Query:   46 LYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAA--LHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSP-EQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSR-FPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVA--LVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVYQGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPP-SLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARD 696
            L  AL+ E +   +   + +    PD+++A   K  A   L   D AL L       + E+AY LYRL +  EAL +L+G   E    +  HL  Q+ F++G Y+++I ++  L+   ++  D   +EL TNL AA+ +A R QE   R  P++       +E+AFN     + +GD  AAE  L  A  +C      E  S  +I  E + I+ + A+V   +G     L     + K   KL +  V A A      ++  R    +   L  + A++     K+ P Q   +  N AL+L    + ++  +++  LKK           Q P +  +A  +V +AIK Q AA    G ++ L             Q  V    ++G   A   + +G++ +AA+ + SI  L   P  VAT+ ++Y + G      A  + A++             K+  G    +  K     AA A   LL+ +   G LD D+RLR++A LV+A+S+ D E A +   A LPAVE  G      VD S LE+  +PR       R     A  G +K     E+ +AAK  E   R+RAR R  +LA L A   Y+AS     PDPERWI + QRS+ KRG++GR +FVGAQG+G G  +D
Sbjct:   18 LNAALKRENYTRAVDICNKIRSKFPDDVDAVKVKCVALIRLEKFDKALELAVKYDFLNTEKAYCLYRLKQDDEALKLLEGGDLEALSTAQLHLAAQLHFRQGNYNQSICIYELLLSRAQEGDDL--LELQTNLLAAYASAGRSQELKDREIPID-----DGFEVAFNKSFVAIQSGDWGAAEELLLTAERLCRDTFEAEGASEAEIGEEVAVIKTQQAFVKQMRGDLDGALSDYRNVLKL--KLRNRAVGAVASNNIVTIRKDRDVLDSFKRLKNIDASV--LSDKLSPAQQEAILTNRALLLCLLNKTEECRESLEVLKK-----------QFPSSKSIADIVVLLAIKDQSAA----GAIEQL-------------QGDVSVGGRLG--LAHVYLTEGQVLKAAECIRSIEQLAHSPGTVATLVALYEQAGDSASAQAVLESALAHHKAGDYTSEQAMKIREGDCWYKIQKKQYREAADAYLELLEGET-AGALDRDLRLRSMASLVVALSFCDAE-AAEARCAMLPAVEESG------VDPSELEKQ-VPR-----STRLAAKFADTGDKKN----ERKRAAKSPEAIARKRARRREAHLANLRARPDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKD 616          
BLAST of EWM27885.1 vs. NCBI_GenBank
Match: gi|567997915|gb|ETL47994.1| (hypothetical protein L916_02336 [Phytophthora parasitica])

HSP 1 Score: 156.377 bits (394), Expect = 2.410e-36
Identity = 203/660 (30.76%), Postives = 307/660 (46.52%), Query Frame = 0
Query:   46 LYHALEEEAFEEVLSAADAVLKSAPDELEARAAKAAAA--LHTGDYALALTTALPAQDFERAYALYRLGRGSEALAVLDGSP-EQNEISFRHLRGQVLFKEGRYDEAIEVFSALVEEGRKAGDEEDVELLTNLYAAFVAARRGQEALSR-FPLEAELRETSYELAFNSGAALVDTGDLSAAEARLREALNVCERLGLEEEMSPVDILNEGSGIRQELAYVLASQGRRREGLEMVSTLTKKANKLSDPVVRASAMITAAALKGGRGQTKAQGGLNKLQAALEEAGPKMIPGQSILLRVNEALMLVHSGRLDDAEKAVAALKKEAASATAKGGGQAPGTWRVA--LVEVAIKMQRAATDPAGDLQTLFQTVQAMARGSPSQDSVDAEQQVGTAWAQCLVY--QGKLREAAQVLESIPSLQGYPAVVATVASIYAKLGLEEEVLATFDRAVSSFPP-SLPPPFLAKLLRGTAALRRAKGDQAGAATALRALLDSDKLKGELDSDVRLRTLADLVMAMSWVDGEEAGKIAEAELPAVEGEGGNEDEEVDASILEEAGLPRRQGGGERRTLPPGAAPGGQKEKEEEEQAKAAKKAEVRRRQRARARTVYLAKLTAEGKYDASRPGPPPDPERWIAKNQRSYNKRGKKGRGKFVGAQGSGNGAARD 696
            L  AL+ E +   +   + +    PD+++A   K  A   L   D AL L       + E+AY LYRL +  EAL +L+G   E    +  HL  Q+ F++G Y+++I ++  L+   ++  D   +EL TNL AA+ +A R QE   R  P++       +E+AFN     + +GD  AAE  L  A  +C      E  S  +I  E + I+ + A+V   +G     L     + K   KL +  V A A      ++  R    +   L  + A++     K+ P Q   +  N AL+L    + ++  +++  LKK           Q P +  +A  +V +AIK Q AA    G ++ L        +G  S         VG       VY  +G++ +AA+ + SI  L   P  VAT+ ++Y + G      A  + A++             K+  G    +  K     AA A   LL+ +   G LD D+RLR++A LV+A+S+ D E A +   A LPAVE  G      VD S LE+  +PR         L    A  G K+ E +   +AAK  E   R+RAR R  +LA L A   Y+AS     PDPERWI + QRS+ KRG++GR +FVGAQG+G G  +D
Sbjct:   18 LNAALKRENYTRAVDICNKIRSKFPDDVDAVKVKCVALIRLEKFDKALELAVKYDFLNTEKAYCLYRLKQDDEALKLLEGGDLEALSTAQLHLAAQLHFRQGNYNQSICIYELLLSRAQEGDDL--LELQTNLLAAYASAGRSQELKDREIPID-----DGFEVAFNKSFVAIQSGDWGAAEELLLIAERLCRDTFEAEGASEAEIGEEVAVIKTQQAFVKQMRGDLDGALSDYRNVLKL--KLRNRAVDAVASNNIVTIRKDRDVLDSFKRLKNIDASV--LSDKLSPAQQEAILTNRALLLCLLNKTEECRESLEVLKK-----------QFPSSKSIADIVVLLAIKDQSAA----GAIEQL--------QGDVS---------VGGCLGLAHVYLTEGQVLKAAECIRSIEQLAHSPGTVATLVALYEQAGDSASAQAVLESALAHHKAGDYTSEQAMKIREGDCWYKIQKKQYREAADAYLELLEGET-AGALDRDLRLRSMASLVVALSFCDAE-AAEARCAMLPAVEESG------VDPSELEKQ-VPRST------RLAAKFADTGDKKNERK---RAAKSPEAIARKRARRREAHLANLRARPDYNASIGLVNPDPERWIPRKQRSHGKRGRRGRNRFVGAQGAGMGTEKD 616          
The following BLAST results are available for this feature:
BLAST of EWM27885.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110216|gb|EWM27885.1|0.000e+0100.00srp72 [Nannochloropsis gaditana][more]
gi|553186056|ref|XP_005854352.1|0.000e+0100.00signal recognition particle subunit SRP72 [Nannoch... [more]
gi|298705854|emb|CBJ28999.1|2.708e-5129.66conserved unknown protein [Ectocarpus siliculosus][more]
gi|325188526|emb|CCA23060.1|9.896e-4128.42signal recognition particle putative [Albugo laiba... [more]
gi|1214691166|gb|OWZ06160.1|4.706e-4029.80Signal recognition particle [Phytophthora megakary... [more]
gi|695448778|ref|XP_009535069.1|4.817e-4029.95hypothetical protein PHYSODRAFT_318537 [Phytophtho... [more]
gi|673047329|ref|XP_008877625.1|1.249e-3930.38hypothetical protein H310_12379 [Aphanomyces invad... [more]
gi|301113890|ref|XP_002998715.1|9.901e-3829.56signal recognition particle, putative [Phytophthor... [more]
gi|568045395|gb|ETM42551.1|2.259e-3630.55hypothetical protein L914_11820 [Phytophthora para... [more]
gi|567997915|gb|ETL47994.1|2.410e-3630.76hypothetical protein L916_02336 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2798rna2798Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications