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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100197g4.5169.mrna |
| Orig protein id | gnl|cribi|Naga_100197g4.5169 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1205859..1207948 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2786 ID=rna2786|Name=rna2786|organism=Nannochloropsis gaditana|type=mRNA|length=1688bp
AGGTGAAAAGTATTCAGTAAGATGGCATGGGACCTTGTAATAGCGAGTCT
CGGGCGATAGAAGCTACCCGGTGAACGAGGCAACCGCGTATTTATGCATG
ATGATAAGAAGCTCGGGAGTCATTTGGTGCACTTTAATAATCACACGAAT
TATTAAACGGCTGAAGAGACTAACGAGGACTCAAGGGTCGCTTTCATTGA
ACCATCATTCTTTTCCCGAGGACAAAGTTAGGGAGACCTGTCCTCATATG
AGGGGAGGTTAGAAGGACCAATAGGACCGTGGCCTAGAAAATGTCACAAG
TGACTCGCACACACCACGAAACAGATCGAGCAGATACAGACGTCTGAAAC
GTCGTTGACTGACCGATGGGCGTTGGTCAGGAGAAGGAGAAGACTTTCTC
GGATGAGGAAGTACCTCGGAGCAAGAGTGGTGCCGGTGAAGGAGAGGAGC
GTCGTCATTCATGCAGTGATGCCAATGACAGTGACGCTGGCTCATCCTCT
TCGTCGTCCTCGTCATCTTCGACCGGTGGCAGCGGTAGCAGCACCGGGAA
TGTTCAAAACGATAAAAAGAAGAAACAGGAAAGGGTAAGGGTGCCCGTTT
CACGGTGCTTTCGGTCTTGACATCTGTAAACGCAAACCTTCCTCATCAAT
TTCTGCCTGTCCCTTTTTTACTCCAGAATCGGGCTGAAGCTCTGCTACAG
GCCGAGAACCGAGTCCAGACACAGCAAAGGTCTAGAATGTGGCAAACAGT
GGCTAGCAGCGGTGAAAGCGATGGGAATAGCGGCAGCAGCAGCGAAGGAA
GCGGAAATGAAGACAGCGAAGGTGATGGCAGGAGGGTAGATATGAAAGAA
GTGGGAGCTATGAGTAAAAGGAAGAAAGTTGAGAAGGAGAAGGAAGGAAG
ATCAAAAACGGACGAAAGAGAAGGGGAACGGGCAACGAAGCGGCGAAAGC
GGGAGAAAAAAGAAAAGAAGAGAAAACATGAAGAGAGGGAGAGGAAGAGG
AGACGGAAGGAGGAAAAGGACGACAGGAAGAAGGAAAAGAGAAGAAAAAA
AGACGGAAAAAAGGAGGAAAAGAAGAAGAAGAAGAAGAAGAAGGAGAGGA
GAGACGACAAGGCAAAGGGAGCAATCATACCGGGGGCCGTGGACATGAAC
CAGTTCGGGAAACACGGCATTATTCGGGAATCGGACTTTCACAGGAAGAA
GAACGACTTCGAAGTGTGGTGTCAGGAGATTAAAGGTCTTCCCGAAATTC
CCCGAAACCACCACGAGGCCCTCCGCTTGTTTCGCTACTACATGGAGGAC
TACAATACTGCCACGTTCCCTCATCCTAAGTACTACAACGTGGAAGCCTA
CGAGATGGATGAGTACAAACGTGGGCAGTTGAAAGCTGCATTTAAAGAAG
GCAGGGAGGGAGGCGTGTTCAAGGACGAAGAGGAACGCCGCTTGGAGAGT
AAAAAAGGCGCGAAGGAGGGTGAACGAGCCGATTTGGAGTGGGCGTTGAA
GATGATGAGCAAAGAAAAGAGGGATGCGTTGAAGGAGGAGGAGTTGCTGC
GGGCCAAGATGCAGCAAGCGTACAAGGTACAAGAGGAAGTAAAGGGGTCA
AATCAATGCGGGACTGCTTGAGTAGAAGGAGGAGCGCGGTGAGGGCGGAG
GTGAATATGTGGCGGTTCCTTACTTTTACGTGCAATCC back to topprotein sequence of rna2786 >rna2786-protein ID=rna2786-protein|Name=rna2786|organism=Nannochloropsis gaditana|type=polypeptide|length=141bp
MNMAASLDQSLTIFDYLPKAEPPSLNNSMSELASAVSSVRGNEDDDDERE
ENGTYVNSYGSSFPASASGTSNLTATSAASKSSTTVASSGATRKRSTANA
HGSSDDKRQKKLELNRLASRVSLILLWKEDSARIPSPKRCE back to topmRNA from alignment at CM002459.1:1205859..1207948- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2786 ID=rna2786|Name=rna2786|organism=Nannochloropsis gaditana|type=mRNA|length=2090bp|location=Sequence derived from alignment at CM002459.1:1205859..1207948- (Nannochloropsis gaditana)
AAACTACCTGTCCTGTGTACTTAAAAGTTGCGTGCAAAAAGTTTCCCACG
ATTATTGGTTTGCAAGCTACTCTGGAAGACTGTGTAAAACCCTACAGGCC
ATGCTTACTTTTCGTAATTGACAAAGACAGGCCGGCTTGAACCGTCGAGC
TTATTCTTTTCGTCTGTTTGCCAAGTCATTTCACTCCATTGCTTATTTTT
GTTCCCAATCGCTAACACTTATCTGCTTCATTACTCATTTACGATCACTT
ACAAAACATATTTTATAGGGTGACATGAATATGGCGGCCTCTCTCGATCA
AAGCTTGACTATATTTGATTATTTGCCTAAGGCGGAGCCTCCATCTCTCA
ATAATAGCATGAGCGAGTTGGCTTCTGCGGTCTCTTCCGTGCGGGGAAAT
GAAGATGACGATGACGAAAGAGAGGAGAACGGCACTTACGTGAATTCGTA
TGGCTCCTCATTCCCGGCATCCGCGTCCGGAACAAGTAACCTCACTGCTA
CGTCCGCCGCGAGCAAGTCTTCGACGACGGTAGCGTCGTCAGGAGCCACC
CGAAAAAGATCCACAGCAAATGCGCATGGATCGTCAGACGACAAACGTCA
AAAAAAATTGGAGCTGAACCGACTTGCTTCGCGGGTGAGTTTAATTTTAC
TTTGGAAAGAGGATTCTGCGAGAATCCCTTCCCCGAAAAGGTGTGAATAA
AGTTGATGCAATGCTAGATTCACCTTACCAATTCCTCCACTCTGACCTTA
CTTCCATCCCATTGGTCTCCAGGAATCCCGCAAACGGAAGAAAAGACGCT
TGGAAGAGCTGCAGCGCTCCGTGCTGTATCTGACGCACGAGAATCACCAA
CTTAGGGAGCAAAATGAACTGCTCCGACAAATGCTCATTGGCCGGCTTCC
CACAGGGACAGTAGCGGCAGCCCTAGGAAATGGGGGGGAAGGAAACGAGA
AAGGGCTCCTCGCAATGAGGGGACCGGGGGAAATGGAGAAGGAAGAGGTG
TTGGCAACGGATCACGGGGAAGGAGAAAGTCTCAATGTGCTGGGCTCCAT
GTCCTCGGCCGCGGTGGATATGTTCTTTCCGAACACGAATTTATTGATGA
TGAAGGAAAATGTTGAAGGCGGGAAAGAGGAAGAGCCCTCTATAGTTGGA
GCAGCATGAAACGACCATCTCGTGCGGTGGGGAAAACCCGGGGGAACAGC
GACAGAGTTGGCGTGACAAGAGAAAAGGCCGGTCGAGGATGGCCATATGA
GGGTCCTCTGGAGGATCAATGTTGGAAGCAAATGACGGAGAAGCAAGGGG
AATAAAAAGAGGGAGAGAATTTGAAGAGGCGATAGTTCGTGCTTCGGATG
AGGACCTACCTACCCCTCAGAGACCAACCATCTAGAATATTGTATCAGAC
ATGGACCTTGATGTCTGCAGGAGGCTCTGCGCCAGAGGAAGATAGCCATG
ACCGATTTAAAAGGAGAAAGACGTCGGGAATGGTTTAAAGATATACGGGA
TGAAAGGAGGATTTGAAGGGATGTGCATGTTTTGTCAGATTTATGTCTAG
TGCATATTTATGGTCATTGACTTGGTTCTAGTGGAGGGGAGGTGCGAATA
CAGAAATCTTCTGGTCCGCGAGGACGCACAGGAGGATAAAGGTGGGAAGG
GAGAACTTTTTGTGAGCAAAGAAGGGGTCCACGAGGAATGGAGGACGGAC
TAGACGTGAGGAGAGTTTATGCCGAAGGAGACCCTTCAGAAGTGCAGGTG
GAAAACGGATCAGGAAGGAAACAATTAAAACCCATGTGGAAGGAAGAGGA
TGAGGGGTTTGGGCGGCAGCGGAGCCGAGGCAACTGCACGAATCATGGTC
ATATACCATCTGATGTGGATCCTCTTTCCACACCATGTTCGGCTGACTGG
GATGATCGTCATCTATCTATCTCTGTGTCTATCCTATGCTTCGAGAAGAA
TCGAAAACAGGTAAAAAAGTATCCAAGTCTGCCAAAAGTGCAGCCTGTAA
GTCAGGAACCAAGGCCTGCGCCTCTCAGCCCAACACATTAAAAGAAGAGA
AACGACAAGACATCTTCCTTCCTGTGTATGTCTGTCTTGC back to topCoding sequence (CDS) from alignment at CM002459.1:1205859..1207948- >rna2786 ID=rna2786|Name=rna2786|organism=Nannochloropsis gaditana|type=CDS|length=426bp|location=Sequence derived from alignment at CM002459.1:1205859..1207948- (Nannochloropsis gaditana)
ATGAATATGGCGGCCTCTCTCGATCAAAGCTTGACTATATTTGATTATTT
GCCTAAGGCGGAGCCTCCATCTCTCAATAATAGCATGAGCGAGTTGGCTT
CTGCGGTCTCTTCCGTGCGGGGAAATGAAGATGACGATGACGAAAGAGAG
GAGAACGGCACTTACGTGAATTCGTATGGCTCCTCATTCCCGGCATCCGC
GTCCGGAACAAGTAACCTCACTGCTACGTCCGCCGCGAGCAAGTCTTCGA
CGACGGTAGCGTCGTCAGGAGCCACCCGAAAAAGATCCACAGCAAATGCG
CATGGATCGTCAGACGACAAACGTCAAAAAAAATTGGAGCTGAACCGACT
TGCTTCGCGGGTGAGTTTAATTTTACTTTGGAAAGAGGATTCTGCGAGAA
TCCCTTCCCCGAAAAGGTGTGAATAA back to top
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