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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100197g11.5175.mrna |
| Orig protein id | gnl|cribi|Naga_100197g11.5175 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1186994..1187592 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2781 ID=rna2781|Name=rna2781|organism=Nannochloropsis gaditana|type=mRNA|length=2723bp
GGATGAATGAGATATCCATGTTCAGCGCCCTTTCCCTCCTTCCCTCCCTC
CAGCGGCTCCTGGCTCTCCTCTTTGCCGTCCCCTGGCAAAGTCAGGAGCT
CTTACCCCAGTACAGCCGTGTGGTGGCCACACTCTCTCCCCTCCTCCCCG
AGATGGGCCCTTCCCTCGTCCGGGAACTTCAACGCGAGTTTCGATACTTC
CTGCGAAAACGACCCAACTCCCATTTGGACATGAAGGTAGGGCGCGGGTG
AGGGCGGGGGCGAGGGCGGGGGCGAGGGCAGGGAGAGAAATGGCAGGACA
GCGTGGTGTGTCAGAGTCTGGCATTCTGGAAGGAGAAGGACGAAGACCCG
TCCACCACGTTCCGGTTTCTTCTCCTGCTCCTGCATCTTGACCCGTGTCC
TCCCTCCCTTCCTTCCTTCCTCCCTCATTTCCTTATCTTCTTCAGCGCAA
GACCGTCAAGTACGTCGGAGAGCTCGTCAAGTTCAAGATTTGTCCCCCCA
TTGTGCCTTTCACATTCCTCAACGCCTGCTTGGAAGCGTTTTCCCGCCAC
AACGTGGAGCTCGCCTGTGCCCTGCTGGAAACCTGCGGACGCTTCCTCTT
CCTCACTCCTCACACGCACACGCGCCTGAAGGGCTACTTGAGCACCATGG
AGAGGCTCAAGCGGGTGAAATCGCTCGACCCCACCCTGGAGGTTTTGATC
GACAACGCCTGCCTGATTTGCAACCCTCCTTCCCAGCGGACAACGACCCG
GCAAACCGTCCTCCTTCCCCCGCTCCATGCCTACCTTCGTTTCCTCCTCT
TTGAGCGCCTCAGCCCGAAAAACACCGACGACGTCCTCTATTCCCTGCGC
AAATTTCCCTGGAAAACTCCGAGGGGGGGGGCGCCAGCCGAAGCCACAGG
GTTGAGTGAGCTGGAAGTGTTTTTCCTCCGCTCGGTCCTGCAAGCCGCGC
GGGGTAAGTTCCACGCCTTGCATGCCCTGGCGGACGTGGTGGCTGGCCTG
GGGAAATACCACGAGAACATGGCAGTGAGCATGGTCGACGAGGTCTTGGA
GGAGCTCAAACGGGGGTTGGAAACGGCGGGGGGACGCCGGGATCGGGACA
CCCAAGGCTTCTTGGCCCTCAGCCGTTTATTGGGCGAGTTTTATAACTAC
AATTTGATTCCTCATGCCTTGGTTTTCGACACGTTGTACCTTTTCCTGCA
CTACGGCCACGAGGTGCCTCCGCACCCCTCCCTGCCTTCCTCCATCCCGC
CCTCGTTCCCTCCCTACGTCACGCACGACCCTCGCATCCTCACACCCTTG
GATCCCCCCGCAGATACCTTCCGCTGCCACCTCGTCATCAACCTTCTGCA
GGCCTGCGGTCCGCTCTTGGCGGGCAAAGGGCACGAGAAAGTGCGAGGGA
AGCTTTCCCTTTTTCTCACCTACTTCCAACGCTACCTCTTTTGTCGCGGC
TACGTACCCCCTGACACGGAAAACGACGTCTTGGACCTCTTGGAGTTGTT
GGAAGACAAAGGGCGGGCGGGAGGGCGGGACCTGGTGCAGCGTTTTGCGA
CGTGGGAAGAGGCACAGGCGGCAGTGGAAGCGGTCGAGAGGGAGGAATGG
GAGAGGAAAGCGGGCAGCGCCGGTGAAAATGCGAGCGGAGGGCCGAGCAT
AGCGGTGGGGGCGGTCAAGATGGTGGTGGAGGAAGACGAGAGCAGTACGA
GCACGGGGGAGAGTACCCACAGCAGTGAGAGCGGGAGTGAAAGCGAAGAG
GAGGAGGAAGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAGGAGGAAGA
AGAGGAGGTAAGAGGGGAGGAAGAAGAAGAGGAGGAAGTTGTGGCGGTCC
ATCCGCGCGTTCCCCTCAAGACGGAGGAGGATTTGGAAACGGAGGCGGTG
TTCGAGAAGGCTTTTGCCAGCATGGTCATGCACAGTGTGGAGGAGCGGAA
AACCAACGTCCGGGCGGGGGCGACCAGCGTCAGCGTGGACAACATGGTTC
TACCCACCACCCTTCCCAAGCTTTCGCACCAAGAACAAGGGAAAGGAGGG
AAGGAGGGGGGGAGCGGCCTACGCTTCTGCATGCTGAAACGGGGGAACCG
GGGGAAATTAGAGGCAAAAGAGCTGCTGGTGCCTGCGTACACCTCGCTGG
CCACGCAGATACGCAGCCATCAGGACGCAGCCAAGGAGGAGCGTGACAAA
CTCAAGCAACGTGTGTTGCAGTACGAAAGCATGGTGGAAGGAGGGGAGGG
AGGGGAGGACGGGTGGGGATGGGAGGAGGAAGGGGAGCTGGAGCGGTTGC
AAAATCGTACCTTGACAGAAGGGGAGAAAGCCAGGCTGACGGCTTTGGCC
GCGCGGAAACGGGCGCAACGGTTGACAAGAGGAAGGGGGGGGGAAGGCAG
AGGGGGTGGGCGGGGAGTGGGCCGGGGTAGTGGTGGTAGTGGACCAAGCC
ATGGCAGGGAGGAAGACCACCGAGGCGATCGGGGATTGCCGCCGGGTGGG
CTTGGATTTTTCAATCGAAAGTAGAGAGAGAAAGACGTGGGAAGAAAGAG
AGGAAAAGGAAAAGAGCCCTTGTATAGGGACATGAACGTCAAGGCATGCG
AAGGGAAGGTCCTCAGTCCTTCTCCCTTCTACTCATGTCGTGCTGAGGAT
AACGGCCCCCTGGTTGCTTCAGGGGATTGGGAACACATGCCTGTGATCCG
CTAATCGACATCTGGCGATTCGA back to topprotein sequence of rna2781 >rna2781-protein ID=rna2781-protein|Name=rna2781|organism=Nannochloropsis gaditana|type=polypeptide|length=138bp
MQQGTKNVSESADGNGKESNKDRRPRGRGPTARSSNFRKNYGAQGKDNNV
QPLSPPFPVSKAKKKDALTPSHGSGPEEEAALAKKKMEEAEAAAKAQEEI
AQKRRQEEEAAKVEKQRQAQTEARKQLEELERVEEVRG back to topmRNA from alignment at CM002459.1:1186994..1187592- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2781 ID=rna2781|Name=rna2781|organism=Nannochloropsis gaditana|type=mRNA|length=599bp|location=Sequence derived from alignment at CM002459.1:1186994..1187592- (Nannochloropsis gaditana)
AATGTGCCCTGCGCCTGAACGAGACCATTTCATCCCTTCCCTGTTTTGTA
CATCATACAGCACCTCACCTCACATGAGGTCGTTGGAGTCATGCAACAGG
GAACCAAAAATGTAAGCGAGAGCGCCGATGGCAATGGAAAGGAATCCAAC
AAAGGTCAGTGTGGTTGTATCTTGATTTTCATGTGAATTTTTACATGGAA
TGGTCGCATGGCAGCTAATTTATTTTCTCATCGTGTCCACGCCTAGACCG
GCGCCCTCGAGGACGTGGTCCCACCGCTAGAAGCAGTAATTTTCGCAAAA
ATTACGGTGCGCAGGGCAAAGACAACAATGTGCAACCGCTTTCTCCTCCG
TTTCCTGTCTCAAAAGCCAAGAAGAAGGATGCTTTAACTCCTTCCCATGG
CAGTGGTCCGGAAGAGGAGGCGGCCCTTGCCAAGAAAAAGATGGAAGAAG
CAGAAGCAGCAGCCAAGGCTCAGGAAGAAATCGCACAGAAGCGACGACAA
GAGGAAGAAGCTGCCAAGGTGGAGAAGCAGCGCCAGGCGCAAACGGAGGC
GAGGAAGCAACTTGAAGAGCTGGAGAGGGTGGAGGAGGTAAGGGGATAG back to topCoding sequence (CDS) from alignment at CM002459.1:1186994..1187592- >rna2781 ID=rna2781|Name=rna2781|organism=Nannochloropsis gaditana|type=CDS|length=834bp|location=Sequence derived from alignment at CM002459.1:1186994..1187592- (Nannochloropsis gaditana)
ACCGGCGCCCTCGAGGACGTGGTCCCACCGCTAGAAGCAGTAATTTTCGC
AAAAATTACGGTGCGCAGGGCAAAGACAACAATGTGCAACCGCTTTCTCC
TCCGTTTCCTGTCTCAAAAGCCAAGAAGAAGGATGCTTTAACTCCTTCCC
ATGGCAGTGGTCCGGAAGAGGAGGCGGCCCTTGCCAAGAAAAAGATGGAA
GAAGCAGAAGCAGCAGCCAAGGCTCAGGAAGAAATCGCACAGAAGCGACG
ACAAGAGGAAGAAGCTGCCAAGGTGGAGAAGCAGCGCCAGGCGCAAACGG
AGGCGAGGAAGCAACTTGAAGAGCTGGAGAGGGTGGAGGAGGTAAGGGGA
TAGATGCAACAGGGAACCAAAAATGTAAGCGAGAGCGCCGATGGCAATGG
AAAGGAATCCAACAAAGACCGGCGCCCTCGAGGACGTGGTCCCACCGCTA
GAAGCAGTAATTTTCGCAAAAATTACGGTGCGCAGGGCAAAGACAACAAT
GTGCAACCGCTTTCTCCTCCGTTTCCTGTCTCAAAAGCCAAGAAGAAGGA
TGCTTTAACTCCTTCCCATGGCAGTGGTCCGGAAGAGGAGGCGGCCCTTG
CCAAGAAAAAGATGGAAGAAGCAGAAGCAGCAGCCAAGGCTCAGGAAGAA
ATCGCACAGAAGCGACGACAAGAGGAAGAAGCTGCCAAGGTGGAGAAGCA
GCGCCAGGCGCAAACGGAGGCGAGGAAGCAACTTGAAGAGCTGGAGAGGG
TGGAGGAGGTAAGGGGATAGATGCAACAGGGAACCAAAAATGTAAGCGAG
AGCGCCGATGGCAATGGAAAGGAATCCAACAAAG back to top
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