EWM27899.1, cds2773 (CDS) Nannochloropsis gaditana

Overview
NameEWM27899.1
Unique Namecds2773
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1187439..1187502 -
Alignment locationCM002459.1:1186994..1187346 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27899.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100197g11.5175.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1187439..1187502 -
CM002459.1supercontigCM002459.1:1186994..1187346 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM27899.1 vs. NCBI_GenBank
Match: gi|585110235|gb|EWM27899.1| (hypothetical protein Naga_100197g11 [Nannochloropsis gaditana])

HSP 1 Score: 271.552 bits (693), Expect = 4.895e-92
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 
Query:    1 MQQGTKNVSESADGNGKESNKDRRPRGRGPTARSSNFRKNYGAQGKDNNVQPLSPPFPVSKAKKKDALTPSHGSGPEEEAALAKKKMEEAEAAAKAQEEIAQKRRQEEEAAKVEKQRQAQTEARKQLEELERVEEVRG 138
            MQQGTKNVSESADGNGKESNKDRRPRGRGPTARSSNFRKNYGAQGKDNNVQPLSPPFPVSKAKKKDALTPSHGSGPEEEAALAKKKMEEAEAAAKAQEEIAQKRRQEEEAAKVEKQRQAQTEARKQLEELERVEEVRG
Sbjct:    1 MQQGTKNVSESADGNGKESNKDRRPRGRGPTARSSNFRKNYGAQGKDNNVQPLSPPFPVSKAKKKDALTPSHGSGPEEEAALAKKKMEEAEAAAKAQEEIAQKRRQEEEAAKVEKQRQAQTEARKQLEELERVEEVRG 138
[Close]
BLAST of EWM27899.1 vs. NCBI_GenBank
Match: gi|553188064|ref|XP_005854730.1| (hypothetical protein NGA_0364200, partial [Nannochloropsis gaditana CCMP526] >gi|422294333|gb|EKU21633.1| hypothetical protein NGA_0364200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 265.388 bits (677), Expect = 1.057e-89
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 
Query:    1 MQQGTKNVSESADGNGKESNKDRRPRGRGPTARSSNFRKNYGAQGKDNNVQPLSPPFPVSKAKKKDALTPSHGSGPEEEAALAKKKMEEAEAAAKAQEEIAQKRRQEEEAAKVEKQRQAQTEARKQLEELERVEE 135
            MQQGTKNVSESADGNGKESNKDRRPRGRGPTARSSNFRKNYGAQGKDNNVQPLSPPFPVSKAKKKDALTPSHGSGPEEEAALAKKKMEEAEAAAKAQEEIAQKRRQEEEAAKVEKQRQAQTEARKQLEELERVEE
Sbjct:    1 MQQGTKNVSESADGNGKESNKDRRPRGRGPTARSSNFRKNYGAQGKDNNVQPLSPPFPVSKAKKKDALTPSHGSGPEEEAALAKKKMEEAEAAAKAQEEIAQKRRQEEEAAKVEKQRQAQTEARKQLEELERVEE 135
The following BLAST results are available for this feature:
BLAST of EWM27899.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585110235|gb|EWM27899.1|4.895e-92100.00hypothetical protein Naga_100197g11 [Nannochlorops... [more]
gi|553188064|ref|XP_005854730.1|1.057e-89100.00hypothetical protein NGA_0364200, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2781rna2781Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications