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Properties
| Property Name | Value |
| Product | regulator of nonsense transcripts 2 |
| Orig transcript id | gnl|cribi|Naga_100338g6.10099.mrna |
| Orig protein id | gnl|cribi|Naga_100338g6.10099 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002459.1 | supercontig | CM002459.1:1181650..1184824 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2780 ID=rna2780|Name=rna2780|organism=Nannochloropsis gaditana|type=mRNA|length=2514bp GGATGAATGAGATATCCATGTTCAGCGCCCTTTCCCTCCTTCCCTCCCTC CAGCGGCTCCTGGCTCTCCTCTTTGCCGTCCCCTGGCAAAGTCAGGAGCT CTTACCCCAGTACAGCCGTGTGGTGGCCACACTCTCTCCCCTCCTCCCCG AGATGGGCCCTTCCCTCGTCCGGGAACTTCAACGCGAGTTTCGATACTTC CTGCGAAAACGACCCAACTCCCATTTGGACATGAAGCGCAAGACCGTCAA GTACGTCGGAGAGCTCGTCAAGTTCAAGATTTGTCCCCCCATTGTGCCTT TCACATTCCTCAACGCCTGCTTGGAAGCGTTTTCCCGCCACAACGTGGAG CTCGCCTGTGCCCTGCTGGAAACCTGCGGACGCTTCCTCTTCCTCACTCC TCACACGCACACGCGCCTGAAGGGCTACTTGAGCACCATGGAGAGGCTCA AGCGGGTGAAATCGCTCGACCCCACCCTGGAGGTTTTGATCGACAACGCC TGCCTGATTTGCAACCCTCCTTCCCAGCGGACAACGACCCGGCAAACCGT CCTCCTTCCCCCGCTCCATGCCTACCTTCGTTTCCTCCTCTTTGAGCGCC TCAGCCCGAAAAACACCGACGACGTCCTCTATTCCCTGCGCAAATTTCCC TGGAAAACTCCGAGGGGGGGGGCGCCAGCCGAAGCCACAGGGTTGAGTGA GCTGGAAGTGTTTTTCCTCCGCTCGGTCCTGCAAGCCGCGCGGGGTAAGT TCCACGCCTTGCATGCCCTGGCGGACGTGGTGGCTGGCCTGGGGAAATAC CACGAGAACATGGCAGTGAGCATGGTCGACGAGGTCTTGGAGGAGCTCAA ACGGGGGTTGGAAACGGCGGGGGGACGCCGGGATCGGGACACCCAAGGCT TCTTGGCCCTCAGCCGTTTATTGGGCGAGTTTTATAACTACAATTTGATT CCTCATGCCTTGGTTTTCGACACGTTGTACCTTTTCCTGCACTACGGCCA CGAGGTGCCTCCGCACCCCTCCCTGCCTTCCTCCATCCCGCCCTCGTTCC CTCCCTACGTCACGCACGACCCTCGCATCCTCACACCCTTGGATCCCCCC GCAGATACCTTCCGCTGCCACCTCGTCATCAACCTTCTGCAGGCCTGCGG TCCGCTCTTGGCGGGCAAAGGGCACGAGAAAGTGCGAGGGAAGCTTTCCC TTTTTCTCACCTACTTCCAACGCTACCTCTTTTGTCGCGGCTACGTACCC CCTGACACGGAAAACGACGTCTTGGACCTCTTGGAGTTGTTGGAAGACAA AGGGCGGGCGGGAGGGCGGGACCTGGTGCAGCGTTTTGCGACGTGGGAAG AGGCACAGGCGGCAGTGGAAGCGGTCGAGAGGGAGGAATGGGAGAGGAAA GCGGGCAGCGCCGGTGAAAATGCGAGCGGAGGGCCGAGCATAGCGGTGGG GGCGGTCAAGATGGTGGTGGAGGAAGACGAGAGCAGTACGAGCACGGGGG AGAGTACCCACAGCAGTGAGAGCGGGAGTGAAAGCGAAGAGGAGGAGGAA GAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAGGAGGAAGAAGAGGAGGT AAGAGGGGAGGAAGAAGAAGAGGAGGAAGTTGTGGCGGTCCATCCGCGCG TTCCCCTCAAGACGGAGGAGGATTTGGAAACGGAGGCGGTGTTCGAGAAG GCTTTTGCCAGCATGGTCATGCACAGTGTGGAGGAGCGGAAAACCAACGT CCGGGCGGGGGCGACCAGCGTCAGCGTGGACAACATGGTTCTACCCACCA CCCTTCCCAAGCTTTCGCACCAAGAACAAGGGAAAGGAGGGAAGGAGGGG GGGAGCGGCCTACGCTTCTGCATGCTGAAACGGGGGAACCGGGGGAAATT AGAGGCAAAAGAGCTGCTGGTGCCTGCGTACACCTCGCTGGCCACGCAGA TACGCAGCCATCAGGACGCAGCCAAGGAGGAGCGTGACAAACTCAAGCAA CGTGTGTTGCAGTACGAAAGCATGGTGGAAGGAGGGGAGGGAGGGGAGGA CGGGTGGGGATGGGAGGAGGAAGGGGAGCTGGAGCGGTTGCAAAATCGTA CCTTGACAGAAGGGGAGAAAGCCAGGCTGACGGCTTTGGCCGCGCGGAAA CGGGCGCAACGGTTGACAAGAGGAAGGGGGGGGGAAGGCAGAGGGGGTGG GCGGGGAGTGGGCCGGGGTAGTGGTGGTAGTGGACCAAGCCATGGCAGGG AGGAAGACCACCGAGGCGATCGGGGATTGCCGCCGGGTGGGCTTGGATTT TTCAATCGAAAGTAGAGAGAGAAAGACGTGGGAAGAAAGAGAGGAAAAGG AAAAGAGCCCTTGTATAGGGACATGAACGTCAAGGCATGCGAAGGGAAGG TCCTCAGTCCTTCTCCCTTCTACTCATGTCGTGCTGAGGATAACGGCCCC CTGGTTGCTTCAGGGGATTGGGAACACATGCCTGTGATCCGCTAATCGAC ATCTGGCGATTCGA back to topprotein sequence of rna2780 >rna2780-protein ID=rna2780-protein|Name=rna2780|organism=Nannochloropsis gaditana|type=polypeptide|length=625bp MERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFL LFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQA ARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDR DTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSI PPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVR GKLSLFLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRF ATWEEAQAAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESS TSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEEVRGEEEEEEEVVA VHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNM VLPTTLPKLSHQEQGKGGKEGGSGLRFCMLKRGNRGKLEAKELLVPAYTS LATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELER LQNRTLTEGEKARLTALAARKRAQRLTRGRGGEGRGGGRGVGRGSGGSGP SHGREEDHRGDRGLPPGGLGFFNRK back to topmRNA from alignment at CM002459.1:1181650..1184824- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2780 ID=rna2780|Name=rna2780|organism=Nannochloropsis gaditana|type=mRNA|length=3175bp|location=Sequence derived from alignment at CM002459.1:1181650..1184824- (Nannochloropsis gaditana) GGATGAATGAGATATCCATGTTCAGCGCCCTTTCCCTCCTTCCCTCCCTC
CAGCGGCTCCTGGCTCTCCTCTTTGCCGTCCCCTGGCAAAGTCAGGAGCT
CTTACCCCAGTACAGCCGTGTGGTGGCCACACTCTCTCCCCTCCTCCCCG
AGATGGGCCCTTCCCTCGTCCGGGAACTTCAACGCGAGTTTCGATACTTC
CTGCGAAAACGACCCAACTCCCATTTGGACATGAAGGTAGGGCGCGGGTG
AGGGCGGGGGCGAGGGCGGGGGCGAGGGCAGGGAGAGAAATGGCAGGACA
GCGTGGTGTGTCAGAGTCTGGCATTCTGGAAGGAGAAGGACGAAGACCCG
TCCACCACGTTCCGGTTTCTTCTCCTGCTCCTGCATCTTGACCCGTGTCC
TCCCTCCCTTCCTTCCTTCCTCCCTCATTTCCTTATCTTCTTCAGCGCAA
GACCGTCAAGTACGTCGGAGAGCTCGTCAAGTTCAAGATTTGTCCCCCCA
TTGTGCCTTTCACATTCCTCAACGCCTGCTTGGAAGCGTTTTCCCGCCAC
AACGTGGAGGTTCGTGCTGTCCGTTACCGTCCCTTTTGTAAAACGCCATC
TCCCGCACCTGCTACATTCCCTTAAGGCTCCTCTCTCCTCCACTCCTTTT
CTCTGCATCATCTTCCTCACCCTGTCCTCCCCGCCATCGGCCTCCTTACT
CCTTTCTCCTTTCCCACCTTGCAGCTCGCCTGTGCCCTGCTGGAAACCTG
CGGACGCTTCCTCTTCCTCACTCCTCACACGCACACGCGCCTGAAGGGCT
ACTTGAGCACCATGGAGAGGCTCAAGCGGGTGAAATCGCTCGACCCCACC
CTGGAGGTACGTGCACCCGGGGACGTGGAAGAGAAGCGTCCCCTTTCCTT
TTCAAGGGGGCCAGGCCAGGTCGCGTCACGCCCCCTGCGTTTCTCGAGGC
AGGGCTGGCGTGTCCTTCGAGCCATAAAGAATTGGGATAACCGTGTATCT
TGTTCCCGTTGGCCTCGATCTTCCGCCTCTCCACTCTCTCCCTTGTCTTC
TGCATCCCTTCCCGCCCCGCCCTTCGGTCCAGGTTTCCCCTCGCTTCCTC
TTCCCCTCCTCCACCTCACATCCTCTTGCCCTTCCTGCCTCAGGTTTTGA
TCGACAACGCCTGCCTGATTTGCAACCCTCCTTCCCAGCGGACAACGACC
CGGCAAACCGTCCTCCTTCCCCCGCTCCATGCCTACCTTCGTTTCCTCCT
CTTTGAGCGCCTCAGCCCGAAAAACACCGACGACGTCCTCTATTCCCTGC
GCAAATTTCCCTGGAAAACTCCGAGGGGGGGGGCGCCAGCCGAAGCCACA
GGGTTGAGTGAGCTGGAAGTGTTTTTCCTCCGCTCGGTCCTGCAAGCCGC
GCGGGGTAAGTTCCACGCCTTGCATGCCCTGGCGGACGTGGTGGCTGGCC
TGGGGAAATACCACGAGAACATGGCAGTGAGCATGGTCGACGAGGTCTTG
GAGGAGCTCAAACGGGGGTTGGAAACGGCGGGGGGACGCCGGGATCGGGA
CACCCAAGGCTTCTTGGCCCTCAGCCGTTTATTGGGCGAGTTTTATAACT
ACAATTTGATTCCTCATGCCTTGGTTTTCGACACGTTGTACCTTTTCCTG
CACTACGGCCACGAGGTGCCTCCGCACCCCTCCCTGCCTTCCTCCATCCC
GCCCTCGTTCCCTCCCTACGTCACGCACGACCCTCGCATCCTCACACCCT
TGGATCCCCCCGCAGATACCTTCCGCTGCCACCTCGTCATCAACCTTCTG
CAGGCCTGCGGTCCGCTCTTGGCGGGCAAAGGGCACGAGAAAGTGCGAGG
GAAGCTTTCCCTTTTTCTCACCTACTTCCAACGCTACCTCTTTTGTCGCG
GCTACGTACCCCCTGACACGGAAAACGACGTCTTGGACCTCTTGGAGTTG
TTGGAAGACAAAGGGCGGGCGGGAGGGCGGGACCTGGTGCAGCGTTTTGC
GACGTGGGAAGAGGCACAGGCGGCAGTGGAAGCGGTCGAGAGGGAGGAAT
GGGAGAGGAAAGCGGGCAGCGCCGGTGAAAATGCGAGCGGAGGGCCGAGC
ATAGCGGTGGGGGCGGTCAAGATGGTGGTGGAGGAAGACGAGAGCAGTAC
GAGCACGGGGGAGAGTACCCACAGCAGTGAGAGCGGGAGTGAAAGCGAAG
AGGAGGAGGAAGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAGGAGGAA
GAAGAGGAGGTAAGAGGGGAGGAAGAAGAAGAGGAGGAAGTTGTGGCGGT
CCATCCGCGCGTTCCCCTCAAGACGGAGGAGGATTTGGAAACGGAGGCGG
TGTTCGAGAAGGCTTTTGCCAGCATGGTCATGCACAGTGTGGAGGAGCGG
AAAACCAACGTCCGGGCGGGGGCGACCAGCGTCAGCGTGGACAACATGGT
TCTACCCACCACCCTTCCCAAGCTTTCGCACCAAGAACAAGGGAAAGGAG
GGAAGGAGGGGGGGAGCGGCCTACGCTTCTGCATGCTGAAACGGGGGAAC
CGGGGGAAATTAGAGGCAAAAGAGCTGCTGGTGCCTGCGTACACCTCGCT
GGCCACGCAGATACGCAGCCATCAGGACGCAGCCAAGGAGGAGCGTGACA
AACTCAAGCAACGTGTGTTGCAGTACGAAAGCATGGTGGAAGGAGGGGAG
GGAGGGGAGGACGGGTGGGGATGGGAGGAGGAAGGGGAGCTGGAGCGGTT
GCAAAATCGTACCTTGACAGAAGGGGAGAAAGCCAGGCTGACGGCTTTGG
CCGCGCGGAAACGGGCGCAACGGTTGACAAGAGGAAGGGGGGGGGAAGGC
AGAGGGGGTGGGCGGGGAGTGGGCCGGGGTAGTGGTGGTAGTGGACCAAG
CCATGGCAGGGAGGAAGACCACCGAGGCGATCGGGGATTGCCGCCGGGTG
GGCTTGGATTTTTCAATCGAAAGTAGAGAGAGAAAGACGTGGGAAGAAAG
AGAGGAAAAGGAAAAGAGCCCTTGTATAGGGACATGAACGTCAAGGCATG
CGAAGGGAAGGTCCTCAGTCCTTCTCCCTTCTACTCATGTCGTGCTGAGG
ATAACGGCCCCCTGGTTGCTTCAGGGGATTGGGAACACATGCCTGTGATC
CGCTAATCGACATCTGGCGATTCGA back to topCoding sequence (CDS) from alignment at CM002459.1:1181650..1184824- >rna2780 ID=rna2780|Name=rna2780|organism=Nannochloropsis gaditana|type=CDS|length=3756bp|location=Sequence derived from alignment at CM002459.1:1181650..1184824- (Nannochloropsis gaditana) GTTTTGATCGACAACGCCTGCCTGATTTGCAACCCTCCTTCCCAGCGGAC AACGACCCGGCAAACCGTCCTCCTTCCCCCGCTCCATGCCTACCTTCGTT TCCTCCTCTTTGAGCGCCTCAGCCCGAAAAACACCGACGACGTCCTCTAT TCCCTGCGCAAATTTCCCTGGAAAACTCCGAGGGGGGGGGCGCCAGCCGA AGCCACAGGGTTGAGTGAGCTGGAAGTGTTTTTCCTCCGCTCGGTCCTGC AAGCCGCGCGGGGTAAGTTCCACGCCTTGCATGCCCTGGCGGACGTGGTG GCTGGCCTGGGGAAATACCACGAGAACATGGCAGTGAGCATGGTCGACGA GGTCTTGGAGGAGCTCAAACGGGGGTTGGAAACGGCGGGGGGACGCCGGG ATCGGGACACCCAAGGCTTCTTGGCCCTCAGCCGTTTATTGGGCGAGTTT TATAACTACAATTTGATTCCTCATGCCTTGGTTTTCGACACGTTGTACCT TTTCCTGCACTACGGCCACGAGGTGCCTCCGCACCCCTCCCTGCCTTCCT CCATCCCGCCCTCGTTCCCTCCCTACGTCACGCACGACCCTCGCATCCTC ACACCCTTGGATCCCCCCGCAGATACCTTCCGCTGCCACCTCGTCATCAA CCTTCTGCAGGCCTGCGGTCCGCTCTTGGCGGGCAAAGGGCACGAGAAAG TGCGAGGGAAGCTTTCCCTTTTTCTCACCTACTTCCAACGCTACCTCTTT TGTCGCGGCTACGTACCCCCTGACACGGAAAACGACGTCTTGGACCTCTT GGAGTTGTTGGAAGACAAAGGGCGGGCGGGAGGGCGGGACCTGGTGCAGC GTTTTGCGACGTGGGAAGAGGCACAGGCGGCAGTGGAAGCGGTCGAGAGG GAGGAATGGGAGAGGAAAGCGGGCAGCGCCGGTGAAAATGCGAGCGGAGG GCCGAGCATAGCGGTGGGGGCGGTCAAGATGGTGGTGGAGGAAGACGAGA GCAGTACGAGCACGGGGGAGAGTACCCACAGCAGTGAGAGCGGGAGTGAA AGCGAAGAGGAGGAGGAAGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGA GGAGGAAGAAGAGGAGGTAAGAGGGGAGGAAGAAGAAGAGGAGGAAGTTG TGGCGGTCCATCCGCGCGTTCCCCTCAAGACGGAGGAGGATTTGGAAACG GAGGCGGTGTTCGAGAAGGCTTTTGCCAGCATGGTCATGCACAGTGTGGA GGAGCGGAAAACCAACGTCCGGGCGGGGGCGACCAGCGTCAGCGTGGACA ACATGGTTCTACCCACCACCCTTCCCAAGCTTTCGCACCAAGAACAAGGG AAAGGAGGGAAGGAGGGGGGGAGCGGCCTACGCTTCTGCATGCTGAAACG GGGGAACCGGGGGAAATTAGAGGCAAAAGAGCTGCTGGTGCCTGCGTACA CCTCGCTGGCCACGCAGATACGCAGCCATCAGGACGCAGCCAAGGAGGAG CGTGACAAACTCAAGCAACGTGTGTTGCAGTACGAAAGCATGGTGGAAGG AGGGGAGGGAGGGGAGGACGGGTGGGGATGGGAGGAGGAAGGGGAGCTGG AGCGGTTGCAAAATCGTACCTTGACAGAAGGGGAGAAAGCCAGGCTGACG GCTTTGGCCGCGCGGAAACGGGCGCAACGGTTGACAAGAGGAAGGGGGGG GGAAGGCAGAGGGGGTGGGCGGGGAGTGGGCCGGGGTAGTGGTGGTAGTG GACCAAGCCATGGCAGGGAGGAAGACCACCGAGGCGATCGGGGATTGCCG CCGGGTGGGCTTGGATTTTTCAATCGAAAGTAGATGGAGAGGCTCAAGCG GGTGAAATCGCTCGACCCCACCCTGGAGGTTTTGATCGACAACGCCTGCC TGATTTGCAACCCTCCTTCCCAGCGGACAACGACCCGGCAAACCGTCCTC CTTCCCCCGCTCCATGCCTACCTTCGTTTCCTCCTCTTTGAGCGCCTCAG CCCGAAAAACACCGACGACGTCCTCTATTCCCTGCGCAAATTTCCCTGGA AAACTCCGAGGGGGGGGGCGCCAGCCGAAGCCACAGGGTTGAGTGAGCTG GAAGTGTTTTTCCTCCGCTCGGTCCTGCAAGCCGCGCGGGGTAAGTTCCA CGCCTTGCATGCCCTGGCGGACGTGGTGGCTGGCCTGGGGAAATACCACG AGAACATGGCAGTGAGCATGGTCGACGAGGTCTTGGAGGAGCTCAAACGG GGGTTGGAAACGGCGGGGGGACGCCGGGATCGGGACACCCAAGGCTTCTT GGCCCTCAGCCGTTTATTGGGCGAGTTTTATAACTACAATTTGATTCCTC ATGCCTTGGTTTTCGACACGTTGTACCTTTTCCTGCACTACGGCCACGAG GTGCCTCCGCACCCCTCCCTGCCTTCCTCCATCCCGCCCTCGTTCCCTCC CTACGTCACGCACGACCCTCGCATCCTCACACCCTTGGATCCCCCCGCAG ATACCTTCCGCTGCCACCTCGTCATCAACCTTCTGCAGGCCTGCGGTCCG CTCTTGGCGGGCAAAGGGCACGAGAAAGTGCGAGGGAAGCTTTCCCTTTT TCTCACCTACTTCCAACGCTACCTCTTTTGTCGCGGCTACGTACCCCCTG ACACGGAAAACGACGTCTTGGACCTCTTGGAGTTGTTGGAAGACAAAGGG CGGGCGGGAGGGCGGGACCTGGTGCAGCGTTTTGCGACGTGGGAAGAGGC ACAGGCGGCAGTGGAAGCGGTCGAGAGGGAGGAATGGGAGAGGAAAGCGG GCAGCGCCGGTGAAAATGCGAGCGGAGGGCCGAGCATAGCGGTGGGGGCG GTCAAGATGGTGGTGGAGGAAGACGAGAGCAGTACGAGCACGGGGGAGAG TACCCACAGCAGTGAGAGCGGGAGTGAAAGCGAAGAGGAGGAGGAAGAGG AGGAAGAGGAAGAGGAAGAGGAAGAGGAGGAGGAAGAAGAGGAGGTAAGA GGGGAGGAAGAAGAAGAGGAGGAAGTTGTGGCGGTCCATCCGCGCGTTCC CCTCAAGACGGAGGAGGATTTGGAAACGGAGGCGGTGTTCGAGAAGGCTT TTGCCAGCATGGTCATGCACAGTGTGGAGGAGCGGAAAACCAACGTCCGG GCGGGGGCGACCAGCGTCAGCGTGGACAACATGGTTCTACCCACCACCCT TCCCAAGCTTTCGCACCAAGAACAAGGGAAAGGAGGGAAGGAGGGGGGGA GCGGCCTACGCTTCTGCATGCTGAAACGGGGGAACCGGGGGAAATTAGAG GCAAAAGAGCTGCTGGTGCCTGCGTACACCTCGCTGGCCACGCAGATACG CAGCCATCAGGACGCAGCCAAGGAGGAGCGTGACAAACTCAAGCAACGTG TGTTGCAGTACGAAAGCATGGTGGAAGGAGGGGAGGGAGGGGAGGACGGG TGGGGATGGGAGGAGGAAGGGGAGCTGGAGCGGTTGCAAAATCGTACCTT GACAGAAGGGGAGAAAGCCAGGCTGACGGCTTTGGCCGCGCGGAAACGGG CGCAACGGTTGACAAGAGGAAGGGGGGGGGAAGGCAGAGGGGGTGGGCGG GGAGTGGGCCGGGGTAGTGGTGGTAGTGGACCAAGCCATGGCAGGGAGGA AGACCACCGAGGCGATCGGGGATTGCCGCCGGGTGGGCTTGGATTTTTCA ATCGAAAGTAGATGGAGAGGCTCAAGCGGGTGAAATCGCTCGACCCCACC CTGGAG back to top
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