Naga_100338g6, gene2660 (gene) Nannochloropsis gaditana

Overview
NameNaga_100338g6
Unique Namegene2660
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1181650..1184824 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100338g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1181650..1184824 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2780rna2780-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna2779rna2779-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2780rna2780Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna2779rna2779Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2780

>rna2780-protein ID=rna2780-protein|Name=rna2780|organism=Nannochloropsis gaditana|type=polypeptide|length=625bp
MERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFL
LFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQA
ARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDR
DTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSI
PPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVR
GKLSLFLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRF
ATWEEAQAAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESS
TSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEEVRGEEEEEEEVVA
VHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNM
VLPTTLPKLSHQEQGKGGKEGGSGLRFCMLKRGNRGKLEAKELLVPAYTS
LATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELER
LQNRTLTEGEKARLTALAARKRAQRLTRGRGGEGRGGGRGVGRGSGGSGP
SHGREEDHRGDRGLPPGGLGFFNRK
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protein sequence of rna2779

>rna2779-protein ID=rna2779-protein|Name=rna2779|organism=Nannochloropsis gaditana|type=polypeptide|length=770bp
MNEISMFSALSLLPSLQRLLALLFAVPWQSQELLPQYSRVVATLSPLLPE
MGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPF
TFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLK
RVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERL
SPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKF
HALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGF
LALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFP
PYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSL
FLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRFATWEE
AQAAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGE
STHSSESGSESEEEEEEEEEEEEEEEEEEEEEVRGEEEEEEEVVAVHPRV
PLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTT
LPKLSHQEQGKGGKEGGSGLRFCMLKRGNRGKLEAKELLVPAYTSLATQI
RSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRT
LTEGEKARLTALAARKRAQRLTRGRGGEGRGGGRGVGRGSGGSGPSHGRE
EDHRGDRGLPPGGLGFFNRK
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Synonyms
Publications