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Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF1995 |
| Orig transcript id | gnl|cribi|Naga_100267g4.4723.mrna |
| Orig protein id | gnl|cribi|Naga_100267g4.4723 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1158882..1160935 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2770 ID=rna2770|Name=rna2770|organism=Nannochloropsis gaditana|type=mRNA|length=1609bp
AGCGCAGCGGCGCGAGCTTTGCAGCATTATACTTCCATGGCCCGGGCTGA
AGACGAAGATGCACGCCTCGCTTGGCTGGTGAGTGCAGTAGACATGCTTC
ACATTCATATTATGCTTTATCCTACAGAGTCTCATGCCAACTATTTTCTG
AAACGTTCGTACAGCGAGACGAAGTCGACGAGGACGACGACGAGGACGAG
GAGGAAACGAGACCTACCCTGTTCTGTAGAGGTGCCCTGGGAGCCTTATG
TTCGGCGATCCACCATCTCCACCCTTACGAAACAACTTCTGAAAGCAAAG
AAATAGAGAGCAGGAAGAGACAAGGACATCGCCAAAGAATGCAAGGCAGC
CGAGGCATCCCTTCCAGCGAAATGAATGCGCGTGTCACGGGCGCCGGGAA
TGTGGTCGCGGGATCGGCGGACGATGAGGAGGACGATGAGATAATCGTTG
ATCAACATGCCTCGGTAGCCCCAAGACAGCAGCATCCTGCTTCTATTTCC
CACCAAGGCGATCCTCCCTTGGACAATCCTTTGCACGCCACTCACGCTGC
TTCTCTCGTTTCCGAGGACCTCTCTGGCCCGACCTCCCTAAGCAGCATCT
TAGCTACCTTACGAGGCACGCGCCCCCCCGTAGCGGCTGTGGCCACAGCT
ACCTCTCCTCCCCCTCCACAAGCGCCTCAAAATATCCCTGCCTCTGCAAA
TACCTTCCCCCGTCCACGCATGGAACCAGAACGGCGACGGCTTCATGCTT
TGCCTGCCACGACCGCTAAAGGGTATAAATATGTGCAATGCATGTCTTGT
GTCGAGGAGGAATGGCTGCGTGTCCCAGTGGCTGCCAAATATGTTCGGTG
CCCCACCTGCGGTAGCATCACGATCGCCCTTGCCTCCAACTCGCGCTTTC
CGGCGCGCCAAGGAAGGAGGGAGGAGGGGAATCCGTGCACACGTCTATGG
GCGCGGCTTTTTTCCAGAAGAAGCATGCATTTGTGACTCGTGGGCCAGAA
TTGAAACATTAATACGGGATACTATATCATTGGAAATCGATGTATTCAAT
CATGCAGGGTGTGGTGTGGGGAATGAGCAAGGAAAGTGACTAGAAGGATA
ACAGAGAATTTGCCACGGGTGGGATGTCGACATGTCAAAGAAAAGGCCAG
CGAAGATGGCATGACGTCGGAGGAACGGGAAAAACGGAGGAAACGTATGA
CGGGCGGGGGAAACTACGAGACGTAAGGAGCATGTTGGAGGTGAAGCATG
TGTAGAAGAAAATTTTGTGAGAGGGATGGAAGGTGAGAGAAGGAGGATGA
CAAAGAGGCTGAAAGAAACAGAGAGAGAATGGAAGAGAGTGAGATGGGAG
GTGGAGAGGCGGAGAAAGCGAGGGCGAGGGGCTTTGGGCATGCCATGAGA
AGTGTTTAAGAAGGACTATTGCACACAGAATTCACTGTCTGCTCATCGTA
CTTCACAATACCATTACATTCAAATACACCATCGTTCTTTCTCTTCCATT
TTTCTGATTGCTGAAAAGAGCTTCATTTCTTGTGGGTCGCCCTTTGACAT
GTCGAGTACACGACTGCTTCTTTTTCTTTCCTTCCGACGACCGCCCCTTA
TTCCGCGTG back to topprotein sequence of rna2770 >rna2770-protein ID=rna2770-protein|Name=rna2770|organism=Nannochloropsis gaditana|type=polypeptide|length=322bp
MAARAPCGFLSRIVAFHKTWLSILVLFLLYSTSTNAFYGLSGPRRSQFVS
VLYASTPSKLPVVGSSFYAEVRKQATEAVQAGLKAGFEQMEIEFPISPGR
IDVSLGEFLDDSREWTREFVRPFTPKGAKLWVIFPDGKEATLAGKRWGGV
NFRIMGIDTAMKASKDEPCELQIAVTPGFNVQEYINLEKVRRPGVPMIVV
NGNLDRIRGGYYPRIFYPGLYNVKERMLQYFEPVYYLKPAQGGFIFRKFP
EEWQQVLAYYDLQPGTGRGRGDKGRKEVLTKVVATSEERPAYNDVVNALK
KESLSMARAAQEAQEAAEREAG back to topmRNA from alignment at CM002459.1:1158882..1160935- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2770 ID=rna2770|Name=rna2770|organism=Nannochloropsis gaditana|type=mRNA|length=2054bp|location=Sequence derived from alignment at CM002459.1:1158882..1160935- (Nannochloropsis gaditana)
CTTGTTCTTCCTTTAACACCTACCTTACAGTTTTTGTGGTGGTTTTCTCC
GTGACTGCTGGCTGGGTGATCATGGGTAAGTGATGCTTGCTATTTTTTCC
GAATCAAATGTGGATGATTTAACCTCCTCTGTCCTGTCGCCCACAGCTGC
CCGTGCCCCTTGCGGCTTTCTTTCACGAATTGTAGCATTTCACAAGACCT
GGCTTTCTATACTGGTTTTATTTTTGCTATATAGCACTAGTACCAACGCG
TTCTATGGTCTTTCTGGACCCCGACGATCCCAATTTGTCTCTGTTTTGTA
TGCCTCCACGCCAAGCAAACTCCCTGTCGTGGGATCCTCGTTTTACGCTG
AGGTCCGGAAACAAGGTAATGATGCCCATGATTGGATGTGAGGTATATTA
TAGGAATGTTGCCAATCCCACCTTTAATCTTCTTTGCCCATCAAGCCACC
GAGGCCGTGCAAGCTGGATTGAAAGCTGGATTTGAGCAGATGGAAATTGA
GTTTCCTATCAGTCCAGGACGAATAGATGTCTCATTAGGAGAGTTCTTGG
ACGACTCCCGGGAATGGACCCGCGAATTTGTCCGACCATTTACGCCAAAG
GGGGCCAAACTTTGGGTTATATTTCCAGACGGGAAGGAGGCGACCTTGGC
AGGGAAAAGATGGGGGGGGGTGAATTTTCGCATCATGGGGATCGATACCG
CGATGAAAGCGTCCAAGGATGAGCCCTGTGAATTGCAGGTTTGTGACATC
TCTGCCGGGACAGGATGACCGACCTGCAGGGTTTTCCTTCTTGTTCCTGC
ATCAATTCATTGCTTTTCTTAACATGTCAAGCTGGGTCCATTTTTCGAAG
CTTTCTACATGGTATTTGTGCGTTAACCCTAACCGATTCATTCTCGGCTA
TTCTGTCCCTTTATCATCCTCCTTTTCTGACGACTCCGTCCTCAGATCGC
TGTCACGCCAGGATTTAATGTCCAAGAATACATTAACTTGGAAAAAGTTC
GACGGCCCGGAGTACCCATGATAGTTGTCAATGGAAATTTGGACCGCATT
CGTGGAGGTAAAAGGGAGAGAGGGAGGGAGAGGGAGAAATGGGGAGGGAG
GGGGAGCAGGAAAAGAGGTAGGTAGGTAGAGGGATAGAAAAGAAAATTAG
GACACGAGGACGGCCACACAGATGAACCAATGTATCAGAGCAGGGCGCCC
GGAATAGGCGATTGGACTAAGGCCTGTAGTATCCGATAGGGCCTTCCTGC
CTTCCTCTTTCCTTCCATCCCCGCAGGCTACTACCCTCGCATTTTTTACC
CCGGTCTCTACAACGTCAAGGAGCGGATGCTGCAATATTTCGAGCCCGTG
TACTATCTGAAGCCCGCTCAAGGTGGATTTATTTTCAGGAAATTTCCTGA
AGAATGGCAGCAGGTCCTGGCCTACTACGACCTTCAGCCGGGGACGGGGC
GAGGAAGGGGGGACAAAGGGCGGAAGGAGGTGTTGACTAAGGTGGTGGCA
ACTTCCGAGGAACGACCAGCATATAACGACGTGGTGAATGCTCTTAAAAA
AGAGAGCTTGAGCATGGCCAGGGCCGCGCAGGAGGCCCAGGAGGCGGCGG
AGAGGGAAGCAGGGTAGGACTCGGGCTTGTAGATGTGAGAAGGAGGGCAA
GAGAGGAGGAAATGAGAGTGGCCAGCCATGGGCTGGGAAAAAGGAGGGCT
ATGCAAATAAAGTAATCTTTGGGAAAGAAAGAGTGCCATACGGGTAAGTT
GAGAAGGTCTTATTTCTTATTTATTACACGCGGAATAAGGGGCGGTCGTC
GGAAGGAAAGAAAAAGAAGCAGTCGTGTACTCGACATGTCAAAGGGCGAC
CCACAAGAAATGAAGCTCTTTTCAGCAATCAGAAAAATGGAAGAGAAAGA
ACGATGGTGTATTTGAATGTAATGGTATTGTGAAGTACGATGAGCAGACA
GTGAATTCTGTGTGCAATAGTCCTTCTTAAACACTTCTCATGGCATGCCC
AAAGCCCCTCGCCCTCGCTTTCTCCGCCTCTCCACCTCCCATCTCACTCT
CTTC back to topCoding sequence (CDS) from alignment at CM002459.1:1158882..1160935- >rna2770 ID=rna2770|Name=rna2770|organism=Nannochloropsis gaditana|type=CDS|length=4845bp|location=Sequence derived from alignment at CM002459.1:1158882..1160935- (Nannochloropsis gaditana)
GCTACTACCCTCGCATTTTTTACCCCGGTCTCTACAACGTCAAGGAGCGG
ATGCTGCAATATTTCGAGCCCGTGTACTATCTGAAGCCCGCTCAAGGTGG
ATTTATTTTCAGGAAATTTCCTGAAGAATGGCAGCAGGTCCTGGCCTACT
ACGACCTTCAGCCGGGGACGGGGCGAGGAAGGGGGGACAAAGGGCGGAAG
GAGGTGTTGACTAAGGTGGTGGCAACTTCCGAGGAACGACCAGCATATAA
CGACGTGGTGAATGCTCTTAAAAAAGAGAGCTTGAGCATGGCCAGGGCCG
CGCAGGAGGCCCAGGAGGCGGCGGAGAGGGAAGCAGGGTAGATCGCTGTC
ACGCCAGGATTTAATGTCCAAGAATACATTAACTTGGAAAAAGTTCGACG
GCCCGGAGTACCCATGATAGTTGTCAATGGAAATTTGGACCGCATTCGTG
GAGCCACCGAGGCCGTGCAAGCTGGATTGAAAGCTGGATTTGAGCAGATG
GAAATTGAGTTTCCTATCAGTCCAGGACGAATAGATGTCTCATTAGGAGA
GTTCTTGGACGACTCCCGGGAATGGACCCGCGAATTTGTCCGACCATTTA
CGCCAAAGGGGGCCAAACTTTGGGTTATATTTCCAGACGGGAAGGAGGCG
ACCTTGGCAGGGAAAAGATGGGGGGGGGTGAATTTTCGCATCATGGGGAT
CGATACCGCGATGAAAGCGTCCAAGGATGAGCCCTGTGAATTGCAGCTGC
CCGTGCCCCTTGCGGCTTTCTTTCACGAATTGTAGCATTTCACAAGACCT
GGCTTTCTATACTGGTTTTATTTTTGCTATATAGCACTAGTACCAACGCG
TTCTATGGTCTTTCTGGACCCCGACGATCCCAATTTGTCTCTGTTTTGTA
TGCCTCCACGCCAAGCAAACTCCCTGTCGTGGGATCCTCGTTTTACGCTG
AGGTCCGGAAACAAGATGGGCTACTACCCTCGCATTTTTTACCCCGGTCT
CTACAACGTCAAGGAGCGGATGCTGCAATATTTCGAGCCCGTGTACTATC
TGAAGCCCGCTCAAGGTGGATTTATTTTCAGGAAATTTCCTGAAGAATGG
CAGCAGGTCCTGGCCTACTACGACCTTCAGCCGGGGACGGGGCGAGGAAG
GGGGGACAAAGGGCGGAAGGAGGTGTTGACTAAGGTGGTGGCAACTTCCG
AGGAACGACCAGCATATAACGACGTGGTGAATGCTCTTAAAAAAGAGAGC
TTGAGCATGGCCAGGGCCGCGCAGGAGGCCCAGGAGGCGGCGGAGAGGGA
AGCAGGGTAGATCGCTGTCACGCCAGGATTTAATGTCCAAGAATACATTA
ACTTGGAAAAAGTTCGACGGCCCGGAGTACCCATGATAGTTGTCAATGGA
AATTTGGACCGCATTCGTGGAGCCACCGAGGCCGTGCAAGCTGGATTGAA
AGCTGGATTTGAGCAGATGGAAATTGAGTTTCCTATCAGTCCAGGACGAA
TAGATGTCTCATTAGGAGAGTTCTTGGACGACTCCCGGGAATGGACCCGC
GAATTTGTCCGACCATTTACGCCAAAGGGGGCCAAACTTTGGGTTATATT
TCCAGACGGGAAGGAGGCGACCTTGGCAGGGAAAAGATGGGGGGGGGTGA
ATTTTCGCATCATGGGGATCGATACCGCGATGAAAGCGTCCAAGGATGAG
CCCTGTGAATTGCAGCTGCCCGTGCCCCTTGCGGCTTTCTTTCACGAATT
GTAGCATTTCACAAGACCTGGCTTTCTATACTGGTTTTATTTTTGCTATA
TAGCACTAGTACCAACGCGTTCTATGGTCTTTCTGGACCCCGACGATCCC
AATTTGTCTCTGTTTTGTATGCCTCCACGCCAAGCAAACTCCCTGTCGTG
GGATCCTCGTTTTACGCTGAGGTCCGGAAACAAGATGGGCTACTACCCTC
GCATTTTTTACCCCGGTCTCTACAACGTCAAGGAGCGGATGCTGCAATAT
TTCGAGCCCGTGTACTATCTGAAGCCCGCTCAAGGTGGATTTATTTTCAG
GAAATTTCCTGAAGAATGGCAGCAGGTCCTGGCCTACTACGACCTTCAGC
CGGGGACGGGGCGAGGAAGGGGGGACAAAGGGCGGAAGGAGGTGTTGACT
AAGGTGGTGGCAACTTCCGAGGAACGACCAGCATATAACGACGTGGTGAA
TGCTCTTAAAAAAGAGAGCTTGAGCATGGCCAGGGCCGCGCAGGAGGCCC
AGGAGGCGGCGGAGAGGGAAGCAGGGTAGATCGCTGTCACGCCAGGATTT
AATGTCCAAGAATACATTAACTTGGAAAAAGTTCGACGGCCCGGAGTACC
CATGATAGTTGTCAATGGAAATTTGGACCGCATTCGTGGAGCCACCGAGG
CCGTGCAAGCTGGATTGAAAGCTGGATTTGAGCAGATGGAAATTGAGTTT
CCTATCAGTCCAGGACGAATAGATGTCTCATTAGGAGAGTTCTTGGACGA
CTCCCGGGAATGGACCCGCGAATTTGTCCGACCATTTACGCCAAAGGGGG
CCAAACTTTGGGTTATATTTCCAGACGGGAAGGAGGCGACCTTGGCAGGG
AAAAGATGGGGGGGGGTGAATTTTCGCATCATGGGGATCGATACCGCGAT
GAAAGCGTCCAAGGATGAGCCCTGTGAATTGCAGCTGCCCGTGCCCCTTG
CGGCTTTCTTTCACGAATTGTAGCATTTCACAAGACCTGGCTTTCTATAC
TGGTTTTATTTTTGCTATATAGCACTAGTACCAACGCGTTCTATGGTCTT
TCTGGACCCCGACGATCCCAATTTGTCTCTGTTTTGTATGCCTCCACGCC
AAGCAAACTCCCTGTCGTGGGATCCTCGTTTTACGCTGAGGTCCGGAAAC
AAGATGGGCTACTACCCTCGCATTTTTTACCCCGGTCTCTACAACGTCAA
GGAGCGGATGCTGCAATATTTCGAGCCCGTGTACTATCTGAAGCCCGCTC
AAGGTGGATTTATTTTCAGGAAATTTCCTGAAGAATGGCAGCAGGTCCTG
GCCTACTACGACCTTCAGCCGGGGACGGGGCGAGGAAGGGGGGACAAAGG
GCGGAAGGAGGTGTTGACTAAGGTGGTGGCAACTTCCGAGGAACGACCAG
CATATAACGACGTGGTGAATGCTCTTAAAAAAGAGAGCTTGAGCATGGCC
AGGGCCGCGCAGGAGGCCCAGGAGGCGGCGGAGAGGGAAGCAGGGTAGAT
CGCTGTCACGCCAGGATTTAATGTCCAAGAATACATTAACTTGGAAAAAG
TTCGACGGCCCGGAGTACCCATGATAGTTGTCAATGGAAATTTGGACCGC
ATTCGTGGAGCCACCGAGGCCGTGCAAGCTGGATTGAAAGCTGGATTTGA
GCAGATGGAAATTGAGTTTCCTATCAGTCCAGGACGAATAGATGTCTCAT
TAGGAGAGTTCTTGGACGACTCCCGGGAATGGACCCGCGAATTTGTCCGA
CCATTTACGCCAAAGGGGGCCAAACTTTGGGTTATATTTCCAGACGGGAA
GGAGGCGACCTTGGCAGGGAAAAGATGGGGGGGGGTGAATTTTCGCATCA
TGGGGATCGATACCGCGATGAAAGCGTCCAAGGATGAGCCCTGTGAATTG
CAGCTGCCCGTGCCCCTTGCGGCTTTCTTTCACGAATTGTAGCATTTCAC
AAGACCTGGCTTTCTATACTGGTTTTATTTTTGCTATATAGCACTAGTAC
CAACGCGTTCTATGGTCTTTCTGGACCCCGACGATCCCAATTTGTCTCTG
TTTTGTATGCCTCCACGCCAAGCAAACTCCCTGTCGTGGGATCCTCGTTT
TACGCTGAGGTCCGGAAACAAGATGGGCTACTACCCTCGCATTTTTTACC
CCGGTCTCTACAACGTCAAGGAGCGGATGCTGCAATATTTCGAGCCCGTG
TACTATCTGAAGCCCGCTCAAGGTGGATTTATTTTCAGGAAATTTCCTGA
AGAATGGCAGCAGGTCCTGGCCTACTACGACCTTCAGCCGGGGACGGGGC
GAGGAAGGGGGGACAAAGGGCGGAAGGAGGTGTTGACTAAGGTGGTGGCA
ACTTCCGAGGAACGACCAGCATATAACGACGTGGTGAATGCTCTTAAAAA
AGAGAGCTTGAGCATGGCCAGGGCCGCGCAGGAGGCCCAGGAGGCGGCGG
AGAGGGAAGCAGGGTAGATCGCTGTCACGCCAGGATTTAATGTCCAAGAA
TACATTAACTTGGAAAAAGTTCGACGGCCCGGAGTACCCATGATAGTTGT
CAATGGAAATTTGGACCGCATTCGTGGAGCCACCGAGGCCGTGCAAGCTG
GATTGAAAGCTGGATTTGAGCAGATGGAAATTGAGTTTCCTATCAGTCCA
GGACGAATAGATGTCTCATTAGGAGAGTTCTTGGACGACTCCCGGGAATG
GACCCGCGAATTTGTCCGACCATTTACGCCAAAGGGGGCCAAACTTTGGG
TTATATTTCCAGACGGGAAGGAGGCGACCTTGGCAGGGAAAAGATGGGGG
GGGGTGAATTTTCGCATCATGGGGATCGATACCGCGATGAAAGCGTCCAA
GGATGAGCCCTGTGAATTGCAGCTGCCCGTGCCCCTTGCGGCTTTCTTTC
ACGAATTGTAGCATTTCACAAGACCTGGCTTTCTATACTGGTTTTATTTT
TGCTATATAGCACTAGTACCAACGCGTTCTATGGTCTTTCTGGACCCCGA
CGATCCCAATTTGTCTCTGTTTTGTATGCCTCCACGCCAAGCAAACTCCC
TGTCGTGGGATCCTCGTTTTACGCTGAGGTCCGGAAACAAGATGG back to top
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