rna2766, rna2766 (mRNA) Nannochloropsis gaditana

Overview
Namerna2766
Unique Namerna2766
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1546
Alignment locationCM002459.1:1151309..1152250 -

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Properties
Property NameValue
Productmethylglutaconyl- mitochondrial
Orig transcript idgnl|cribi|Naga_100267g8.4728.mrna
Orig protein idgnl|cribi|Naga_100267g8.4728
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1151309..1152250 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100267g8gene2647Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27915.1cds2758Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2766rna2766-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2766 ID=rna2766|Name=rna2766|organism=Nannochloropsis gaditana|type=mRNA|length=1546bp
TGGGCCCTGCCTGCCTTGACCACCCCGTCGTCGACCCATCGCACTCATCG
TCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCCCAGAGGTATTCACCGCCGGGGGTCAAGCGACGCGCAGGGATCCTG
TTGTACGGGCCACCAGGGACGGGCAAGACCCTCTTGGCGAAGGCAGTGGC
CACGGAATGCGGCCTCGCCTTCCTCTCCGTGAAGGGACCGGAGCTCTTGG
ACATGTACGTTGGGGAGAGCGAACGGAACGTGCGTCAAGCGTTTGCCCGG
GCCCGGGCGGCGGCGCCTGCCGTCTTGTTCTTCGACGAGTTGGACTCCTT
GGCCCCGCAGCGGGGCCGCGGTAGCGACAGTGGAGGGGTGATGGACCGGG
TGGTGGCGCAGCTGCTGGTGGAACTGGATGCGGTCTCCTCGGGGGAAAGA
GGGGGGGAAGGAGGGCGGGAGGGAGAAACGGGGAGACAGGACGTCTTTGT
CATCGGTGCGACGAACCGCCCGGACCTCTTGGATTCCTCCTTGCTGCGCC
CCGGCCGCTTCGACCGACTCTTGTACCTGGGGAATACCACCGACGCGGGC
AGCCGACGCGCCATCCTGCAGGCGGCGACCCGGAAGTTTCCCTTCGGCGA
GGACGTGGATTTGTCCGACGTGGTTTCCCGACTTCCCCCGAATTTTACTG
GGGCCGACTTTTCCGCCGTGGCCGCCCAGGCTTTGATGCGGGCATTGCGC
CGGCGGGTGGCTGAATTGGAGGAGGAGCTGGCGGTCTTGAATGAGGGAGG
GGAGGAGGGGAAGGAGGGTGGGACGGGGGGAGGGAAGTTGAGCCTGGGGA
CGTTTTTGTCGCATTTATCCCCCGAAGAATGCGTGGCGCGGGTCTACCAG
GAAGATCTCTTGGAGGCCGCCACGAAAGTCGCCCCCTCCGTGGCCGCAGA
GGAGCTGGCCCATTACGAAAGGCTTCGGCTTCAATTCAGCAGCACGCATG
CCGCGGCGGGGCTCTCACAGGAAGGCAGCGTGGCGATCCGTGGAGGGGGA
AAGGGGGGAGGGATGGAGGCACTCCCCGTGGAAGTGGGGGAAAGGACAGG
ATTTCTGAACGGGAAGGGGGAAAGAGGGGGAGGGAGGGAAGGGAGGAAGG
GCGGGTCATCAGAATGAAGTGAGGGAAGGAACGTTTCCGGTAGATAGCAC
GTGCACGGGGGGCGATATCGTCGGCGAGAGGAAGGTGGCGATGAGGATGC
TTGTGAGGGGGTAGGGACATGGCCGCCGGAGAGACCGGGGCCCCATGCTC
TCCCAATGGAGCTGATCCTGTCGGTGATTACCGTAAGGACGACAAGGACT
GCGAGGGTGCTCAGGCCTGACGTCGGTGATATTCGGCCAAAAACGGTGGG
GCGCTTCTCCGGATTCCCGGGATGTGCGAGGCGTTTGGGACGGAGGCAAT
GTCCTCGGATCCAAAGTAACGAAATGAACGTACGATATGCAGGCACGCAT
CCTTGGCGATGCCTCATGGACGCGTCGACGGTTGTGTTACACATTT
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protein sequence of rna2766

>rna2766-protein ID=rna2766-protein|Name=rna2766|organism=Nannochloropsis gaditana|type=polypeptide|length=303bp
MSLRVRQVRPSLLPARRFMCSSTSAHPQPPPLLITRHDLGGKLVAESSNT
GVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTK
AFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYG
GGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKE
MMFRATRIGTSEAHRLGLVNAVATEEEEGGVRGLAARWCREIASNGPVAV
RAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVY
AGK
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mRNA from alignment at CM002459.1:1151309..1152250-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2766 ID=rna2766|Name=rna2766|organism=Nannochloropsis gaditana|type=mRNA|length=942bp|location=Sequence derived from alignment at CM002459.1:1151309..1152250- (Nannochloropsis gaditana)
AAAGATATCTACATTCAACTCTCTACTACTATGTCATTGCGGGTGCGGCA
AGTACGTCCGTCCCTGCTGCCTGCGCGACGCTTCATGTGCTCTTCGACCT
CCGCGCATCCCCAACCCCCTCCACTACTGATAACACGCCATGATCTGGGA
GGCAAACTAGTCGCGGAGTCAAGTAATACGGGGGTGATAGTTACACTTGC
CCTAAACCGGCCTGAAGCCCGGAACGCCTTGAACAAAGCATTGGTTACTG
CGTTGAACGATGCCCTTTCCTCCCTCGCCCAGGATCAGATTGCCCGTGTC
CTTCTTCTCACCAGCTCCGCGCCTACGAAGGCCTTCTGCGCCGGCGCCGA
CTTGAAAGAACGTGCTAATATGTCTCCCTCGGAAGTTTCCTCCTTCGTCT
CCAGCCTTCGGGCCCTGATGGACGGCGTGGAGAATTTACCAATGCCTGCC
CTCGCTGTCCTGGAGGGCGGTGCCTATGGTGGCGGCCTGGAATTGGCGTT
AGCGTGCGATATGAGGGTGGCAGGACCCAAGGCCGAAATGGGCCTGACGG
AGACAAGCCTGGCAATCATCCCGGGGGCGGGAGGCACGCAGCGTTTGCCG
CGTCTGATAGGCGCGGCCAGGGCCAAGGAGATGATGTTTCGGGCCACGCG
TATCGGCACTTCGGAGGCGCATCGGCTGGGTTTGGTGAATGCGGTGGCGA
CGGAGGAGGAGGAGGGAGGAGTGAGGGGATTGGCAGCCCGGTGGTGCCGG
GAGATCGCCTCGAACGGGCCGGTGGCAGTGCGCGCGGCGAAGCAGGCAGT
GCGGGAAGGGATGGAGGTGCCCCTGGCCCCGGGCCTGGAGATTGAGAGGG
CGTGCTACGCCAAGGTCATCCCCACCGAGGACAGGCTGGAGGGCCTGAGG
GCGTTCAGGGAGAAGCGGAAGCCGGTGTATGCGGGAAAGTAG
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Coding sequence (CDS) from alignment at CM002459.1:1151309..1152250-

>rna2766 ID=rna2766|Name=rna2766|organism=Nannochloropsis gaditana|type=CDS|length=912bp|location=Sequence derived from alignment at CM002459.1:1151309..1152250- (Nannochloropsis gaditana)
ATGTCATTGCGGGTGCGGCAAGTACGTCCGTCCCTGCTGCCTGCGCGACG
CTTCATGTGCTCTTCGACCTCCGCGCATCCCCAACCCCCTCCACTACTGA
TAACACGCCATGATCTGGGAGGCAAACTAGTCGCGGAGTCAAGTAATACG
GGGGTGATAGTTACACTTGCCCTAAACCGGCCTGAAGCCCGGAACGCCTT
GAACAAAGCATTGGTTACTGCGTTGAACGATGCCCTTTCCTCCCTCGCCC
AGGATCAGATTGCCCGTGTCCTTCTTCTCACCAGCTCCGCGCCTACGAAG
GCCTTCTGCGCCGGCGCCGACTTGAAAGAACGTGCTAATATGTCTCCCTC
GGAAGTTTCCTCCTTCGTCTCCAGCCTTCGGGCCCTGATGGACGGCGTGG
AGAATTTACCAATGCCTGCCCTCGCTGTCCTGGAGGGCGGTGCCTATGGT
GGCGGCCTGGAATTGGCGTTAGCGTGCGATATGAGGGTGGCAGGACCCAA
GGCCGAAATGGGCCTGACGGAGACAAGCCTGGCAATCATCCCGGGGGCGG
GAGGCACGCAGCGTTTGCCGCGTCTGATAGGCGCGGCCAGGGCCAAGGAG
ATGATGTTTCGGGCCACGCGTATCGGCACTTCGGAGGCGCATCGGCTGGG
TTTGGTGAATGCGGTGGCGACGGAGGAGGAGGAGGGAGGAGTGAGGGGAT
TGGCAGCCCGGTGGTGCCGGGAGATCGCCTCGAACGGGCCGGTGGCAGTG
CGCGCGGCGAAGCAGGCAGTGCGGGAAGGGATGGAGGTGCCCCTGGCCCC
GGGCCTGGAGATTGAGAGGGCGTGCTACGCCAAGGTCATCCCCACCGAGG
ACAGGCTGGAGGGCCTGAGGGCGTTCAGGGAGAAGCGGAAGCCGGTGTAT
GCGGGAAAGTAG
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Synonyms
Publications