EWM27915.1, cds2758 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27915.1 vs. NCBI_GenBank
Match: gi|585110254|gb|EWM27915.1| (methylglutaconyl- mitochondrial [Nannochloropsis gaditana]) HSP 1 Score: 602.823 bits (1553), Expect = 0.000e+0 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
Query: 1 MSLRVRQVRPSLLPARRFMCSSTSAHPQPPPLLITRHDLGGKLVAESSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVNAVATEEEEGGVRGLAARWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAGK 303
MSLRVRQVRPSLLPARRFMCSSTSAHPQPPPLLITRHDLGGKLVAESSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVNAVATEEEEGGVRGLAARWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAGK
Sbjct: 1 MSLRVRQVRPSLLPARRFMCSSTSAHPQPPPLLITRHDLGGKLVAESSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVNAVATEEEEGGVRGLAARWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAGK 303
BLAST of EWM27915.1 vs. NCBI_GenBank
Match: gi|998512484|ref|XP_015516824.1| (PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Neodiprion lecontei]) HSP 1 Score: 275.789 bits (704), Expect = 1.302e-88 Identity = 139/258 (53.88%), Postives = 181/258 (70.16%), Query Frame = 0
Query: 46 ESSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVNAVATEEEEGGVRGLAA-RWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAG 302
+ +TG+ V L LNRPE RNA K LVT D+L+++ +D R +++ S P K FCAGADL+ERA M P EV+ FV+SLR LM+ VE+LP P ++ ++G A GGGLELALACD+R A +A+MGL ET LAIIPGAGGTQRLPR++G A AKE++F + EAH++G+VN V + +G AA REI NGP+ VR AK A+ +G+EVPL G EIE+ CY +++ TEDRLEGL AF+ KR PVY G
Sbjct: 46 DGKDTGIAV-LGLNRPENRNAFGKNLVTQFYDSLATIREDSNVRTVIIRSMVP-KVFCAGADLRERAQMQPQEVTDFVTSLRKLMNTVESLPTPVISAIDGVALGGGLELALACDIRTAANEAKMGLVETKLAIIPGAGGTQRLPRIVGPAVAKELIFTGKILDGEEAHQIGIVNHVVPQNMDGDAAYQAALSIAREILPNGPIGVRLAKVAISQGVEVPLEDGFEIEKKCYTQLLETEDRLEGLAAFKAKRVPVYKG 301
BLAST of EWM27915.1 vs. NCBI_GenBank
Match: gi|652458335|ref|WP_026853165.1| (enoyl-CoA hydratase [Geothrix fermentans]) HSP 1 Score: 273.092 bits (697), Expect = 3.775e-88 Identity = 152/257 (59.14%), Postives = 180/257 (70.04%), Query Frame = 0
Query: 47 SSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVNAVATEEEEGGVRGLAARWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAGK 303
+ G IV L L+RP A+NAL + L+T AL+ L D ARVL++ S P FCAGADLKERA MS +E ++FV LR +E+LPMP LA LEG A+GGGLELALA D+R+AG +A MGL ETSLAIIPGAGGTQRLPRLIGAARAKE++F A R+ +EA RLGLV+ VA A REI NGPVA+R AK AV G+E+ GL ERACYA+VIPT+DRLEGL AFREKRKP Y G+
Sbjct: 9 AGEDGGIVLLGLDRPAAKNALGRQLMTEFRQALADLRSDPAARVLVVHSLVPG-VFCAGADLKERAGMSQAEAATFVQGLRDAFTELEDLPMPVLAALEGAAFGGGLELALAADLRIAGAEARMGLVETSLAIIPGAGGTQRLPRLIGAARAKELIFTARRLDAAEAERLGLVDRVAPAGG---ALDAALALAREILPNGPVALRMAKLAVNRGLEMDRNSGLAFERACYAQVIPTKDRLEGLAAFREKRKPQYRGE 261
BLAST of EWM27915.1 vs. NCBI_GenBank
Match: gi|291241507|ref|XP_002740632.1| (PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial-like [Saccoglossus kowalevskii]) HSP 1 Score: 275.018 bits (702), Expect = 4.361e-88 Identity = 145/303 (47.85%), Postives = 196/303 (64.69%), Query Frame = 0
Query: 2 SLRVRQVRPSLLPARRFMCSSTSAHPQPPPLLITRHDLGGKLVAESSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVNAVATEEEEG-GVRGLAARWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAGK 303
++R R + + + + RF+ ST Q L+++ + G + G I+ LA+NRP RNAL K +V DA++S D+ R L+L S+ P FCAGADLKER M+P+EV+ FV+ R +M +ENLPMP +A L+GGAYGGGLE+ALACD+R+A A+MGLTET LAIIPGAGGTQRLPR+IG RAKEM+F I +A +GLVN + EEG A +EI SNGP+ V+ K A+ +G EV L GL IE CYA+ IPT+DRL L+AF +K++P++ G+
Sbjct: 24 NIRRRTISRTSIQSARFI--STEERQQESDLVVSYVEAGED---TGEDLGQIIVLAINRPTVRNALGKNIVGLFIDAINSAKFDKRVRTLILRSAVPG-IFCAGADLKERVKMAPNEVAPFVAKARGIMSELENLPMPVIAALDGGAYGGGLEMALACDIRIASTTAKMGLTETKLAIIPGAGGTQRLPRIIGKGRAKEMIFTGRVIDGEQAEGIGLVNYAVKQNEEGTAAYKRALEMAKEICSNGPIGVKMTKVAINKGSEVDLQSGLAIEEMCYAQTIPTKDRLIALKAFADKKRPIFIGE 320
BLAST of EWM27915.1 vs. NCBI_GenBank
Match: gi|156554542|ref|XP_001605063.1| (PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Nasonia vitripennis] >gi|645035367|ref|XP_008209152.1| PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Nasonia vitripennis]) HSP 1 Score: 272.322 bits (695), Expect = 2.833e-87 Identity = 155/308 (50.32%), Postives = 199/308 (64.61%), Query Frame = 0
Query: 1 MSLRVRQVRPSLLPARRFMCSSTSAHPQ-----PPPLLITRHDLGGKLVAESSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVNAVATEEEEGGVRGLAA-RWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAG 302
M VR+V SLL A + S Q P I L GK + G+ V L LNRPEARNA K LV+ L+DA+S++ QD+ RVL+L S P K FCAGADL+ER+ M P EV++FVSSLR LM +E L P ++ L+G A GGGLE+ALA D+R A +A+MGL ET LAIIPGAGGTQRLPR++G A AKE+++ A + EAH++GLVN V + +EG AA REI NGP+ V+ AK A+ +G+EV + G EIE+ CYA+++ TEDR+EGL AF KR PVY G
Sbjct: 1 MVFLVRRVSVSLLKAASVSVRALSTKVQLKEDSSPGKEIVLKYLDGK------DNGIAV-LGLNRPEARNAFGKNLVSQLSDAVSTIEQDKKVRVLILRSLVP-KVFCAGADLRERSKMEPQEVANFVSSLRDLMRDLEALSAPVISALDGVALGGGLEMALASDIRTASVEAKMGLVETKLAIIPGAGGTQRLPRIVGPALAKELIYTARILDGIEAHKIGLVNRVVAQNKEGDAAYQAALHIAREILPNGPIGVKLAKVAISKGIEVSIDDGFEIEKQCYAQLLDTEDRIEGLAAFASKRVPVYRG 300
BLAST of EWM27915.1 vs. NCBI_GenBank
Match: gi|646710843|gb|KDR16261.1| (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial [Zootermopsis nevadensis]) HSP 1 Score: 270.396 bits (690), Expect = 1.194e-86 Identity = 139/259 (53.67%), Postives = 177/259 (68.34%), Query Frame = 0
Query: 46 ESSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVNAVATEEEEGGVRGLAA-RWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAGK 303
E ++ G++V L LNRPEA+NALN+ L + A+ S+ D RV ++ S P FCAGADLKER ++ EV +FVS LR+L D VE+LPMP + L+G A GGG ELALACDMR A A++GL ET LAIIPGAGGTQRLPRLIG A AKE++F A + +EA +G+VN + EG L A REI NGP++VR AK A+ G+EV + G IE ACYA+V+PT+DR+EGL AF+EKR P+Y GK
Sbjct: 40 EETDNGIVV-LELNRPEAKNALNRTLASDFFRAIDSVKYDTNVRVFIVRSMVP-GIFCAGADLKERLKLTNLEVKTFVSQLRSLTDAVESLPMPVIGALDGTAVGGGFELALACDMRTASDNAKLGLVETKLAIIPGAGGTQRLPRLIGPAFAKELIFTAKTVTGTEAFEMGIVNYAVKQNNEGNAAYLKALEVAREIIPNGPLSVRLAKVAINSGLEVDTSTGNIIEEACYAQVVPTKDRMEGLIAFQEKRAPIYTGK 296
BLAST of EWM27915.1 vs. NCBI_GenBank
Match: gi|91089059|ref|XP_970538.1| (PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Tribolium castaneum] >gi|270012405|gb|EFA08853.1| Methylglutaconyl-CoA hydratase, mitochondrial-like Protein [Tribolium castaneum]) HSP 1 Score: 268.085 bits (684), Expect = 7.450e-86 Identity = 139/259 (53.67%), Postives = 180/259 (69.50%), Query Frame = 0
Query: 46 ESSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVNAVATEEEEGGVRGLAA-RWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAGK 303
+ S+TG+ V NRP+ +NAL+ LVT L +L + D ARVL++ S P FCAGADLKERA M +EV FVS+LR+LMD NLP+P +A L+G A GGGLE++LACD+RVA +MGL E LAIIPGAGGTQRLPRLI + AKE+++ A I AHRLG+VN V ++ L + EI NGPVAV+ AK+A+ +G++V L+ GL IE ACYA++IPT+DRLEGL+AF+EKRKP Y G+
Sbjct: 31 QGSDTGITV-FGFNRPKQKNALSANLVTELQKSLQKITFDPSARVLIVRSHVPG-VFCAGADLKERATMPQAEVGKFVSNLRSLMDQFHNLPIPVIAALDGVALGGGLEISLACDIRVASSDCKMGLVEGKLAIIPGAGGTQRLPRLINPSIAKELIYTARTIDGGTAHRLGIVNHVVSQNANQDAAYLKSLELAHEILPNGPVAVQMAKKAINKGVQVDLSSGLAIEEACYAQLIPTKDRLEGLQAFKEKRKPNYIGE 287
BLAST of EWM27915.1 vs. NCBI_GenBank
Match: gi|568252027|gb|ETN61423.1| (methylglutaconyl-CoA hydratase, mitochondrial [Anopheles darlingi]) HSP 1 Score: 266.929 bits (681), Expect = 4.799e-85 Identity = 146/291 (50.17%), Postives = 186/291 (63.92%), Query Frame = 0
Query: 14 PARRFMCSSTSAHPQPPPLLITRHDLGGKLVAESSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVN-AVATEEEEGGVRGLAARWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAGK 303
P R F S T P++ +L + E G+ V L LNRP+ARN+ +K+LVT L +A+ LA D+ RV++L S P FCAGADLKERA +P EVS FVS LR +M +E +P P +A ++G A GGGLE+ALACDMRV A++GL ET L IIPGAGGTQRLPR++ A AKE++F A + EA LG+VN AV E A EI NGPV VR AK+A+ +G++V + G IE ACYA+VIPT+DRLEGLRAF EKRKP + G+
Sbjct: 25 PLRTFATSET-------PVVAPNQELQLTYLTEEDKQGIAV-LGLNRPKARNSFSKSLVTQLLEAIDVLAHDKNVRVVILRSLVP-GIFCAGADLKERATFTPQEVSRFVSKLRQMMVNIEQMPTPVVAAIDGAALGGGLEMALACDMRVVATNAKLGLVETKLGIIPGAGGTQRLPRILNPAIAKELIFTARQFSGEEAKALGIVNHAVQPNEAGDAAYRRAIELAMEIVPNGPVGVRMAKKAIDKGLQVDIGTGYAIEEACYAQVIPTKDRLEGLRAFAEKRKPNFIGE 306
BLAST of EWM27915.1 vs. NCBI_GenBank
Match: gi|861641902|gb|KMQ93721.1| (methylglutaconyl- mitochondrial-like protein [Lasius niger]) HSP 1 Score: 266.544 bits (680), Expect = 5.726e-85 Identity = 147/289 (50.87%), Postives = 192/289 (66.44%), Query Frame = 0
Query: 15 ARRFMCSSTSAHPQPPPLLITRHDLGGKLVAESSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVNAVATEEEEG-GVRGLAARWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAG 302
A R + +S P+ + + L GK + G+ V L LNRP ARN+L K LV+ LN+AL+S+ Q+ RVL++ S P K FCAGADL+ER M+ SEV FVSSLRAL+ VENLP P ++ ++G A GGGLELALA D+R+A +A MGL ET LAI+PGAGGTQRLPR+IGAA+AKE+++ A + +A +GLVN + + + G A REI NGP+ VR AK A+ +G EV L GLEIE+ CY+K++ T+DRLEGL AF KR PVY G
Sbjct: 21 ATRTLTTSAMPSPKDEAREVIVNYLDGK------DNGIAV-LGLNRPAARNSLGKILVSQLNEALASIKQNNKLRVLIIRSLVP-KVFCAGADLRERLKMNTSEVPQFVSSLRALVTDVENLPTPVISAIDGAALGGGLELALATDIRIASSEATMGLVETKLAIMPGAGGTQRLPRIIGAAKAKELIYTARILDGEQACTIGLVNEMVPQNKTGDAAYQTALSIAREILPNGPIGVRLAKVAISKGTEVTLEDGLEIEKQCYSKIVDTKDRLEGLAAFAAKRVPVYQG 301
BLAST of EWM27915.1 vs. NCBI_GenBank
Match: gi|1129897681|ref|XP_019749997.1| (PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Hippocampus comes]) HSP 1 Score: 267.314 bits (682), Expect = 5.978e-85 Identity = 147/294 (50.00%), Postives = 193/294 (65.65%), Query Frame = 0
Query: 11 SLLPARRFMCSSTSAHPQPPPLLITRHDLGGKLVAESSNTGVIVTLALNRPEARNALNKALVTALNDALSSLAQDQIARVLLLTSSAPTKAFCAGADLKERANMSPSEVSSFVSSLRALMDGVENLPMPALAVLEGGAYGGGLELALACDMRVAGPKAEMGLTETSLAIIPGAGGTQRLPRLIGAARAKEMMFRATRIGTSEAHRLGLVNAVATEEEEGGVRGL-AARWCREIASNGPVAVRAAKQAVREGMEVPLAPGLEIERACYAKVIPTEDRLEGLRAFREKRKPVYAGK 303
S+ P RF S+ + LI R+ + + G++V + +NRP+A+NA++K LV +++A+ + ++ R ++L S P FCAGADLKERA M SEV FVS RAL+ + NLPMP +A L+G A GGGLE+ALACD+RVA A+MGL ET LAIIPGAGGTQRLPR+IG + AKE+M+ A + EA RLGLV+ + + G L A REI GP+AVR AK A+ +G+EV LA GL IE ACYA+VIPT+DRLEGL AF+EKR P Y G+
Sbjct: 43 SVFPPVRFGASARQYSSEAKDDLIVRY-------LDGEDHGIVV-VGINRPKAKNAISKNLVKMMSEAVGDIKKNNKVRSVILCSLVPG-IFCAGADLKERAKMHQSEVGPFVSKARALITELGNLPMPTIAALDGAALGGGLEMALACDIRVASNSAKMGLVETKLAIIPGAGGTQRLPRVIGVSHAKELMYTARVVDGIEACRLGLVSHSVEQNKNGDAAYLRALELAREINPQGPIAVRMAKLAINQGIEVDLATGLAIEEACYAQVIPTKDRLEGLAAFKEKRHPQYKGE 327 The following BLAST results are available for this feature:
BLAST of EWM27915.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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