rna2755, rna2755 (mRNA) Nannochloropsis gaditana

Overview
Namerna2755
Unique Namerna2755
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2539
Alignment locationCM002459.1:1129171..1130278 +

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Properties
Property NameValue
Productcytochrome class i
Orig transcript idgnl|cribi|Naga_100008g137.7900.mrna
Orig protein idgnl|cribi|Naga_100008g137.7900
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1129171..1130278 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100008g137gene2636Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2755rna2755-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28008.1cds2747Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2755 ID=rna2755|Name=rna2755|organism=Nannochloropsis gaditana|type=mRNA|length=2539bp
AATACAGGACCGGCACATGACATGAATTGCTTCGTGGACACGCAAGCACT
TAATTGACGCGGTCAAGCCGCCGGAAATTGCCTGACCCTGCGCCCTCCTG
GCGCCCTCAAACAGTCAGGGTGATGTTTAAGCCCACGTACCGTCCTGAAC
TTCATGGCACGGAAGATGGATCCGCACACGTGGCCACCGTATTCGATTTG
CTGGGAACGCTTCCTCGTATCTCGCTCGACCGATTGTACGGCCTGGAAGA
CTTGGGTAGTGCCTCCTCCTCGTGCACGCCCTCAGCCTCCCCCTTCCCCT
GGACCTGCCGCGCCGTTTTTCAGTCGCTGACACCTTTAGCCAAGCAGTAC
GTCATGCGGCTCCTATGCTTGCCGGAAGGGGTCAGACAAAGCTCTTTGAA
GAGCTGGGTGGAACCAAGGTTTGTCACGGGCCATCAAAAAGCCGTCCAAC
AGCTTGACAGGTTGCGAATTTTGCTTTCTTCAGAGGACGAAGATATAGAA
GAAGACGAGGACGACAGGAACGGCGGATACGGGAGACTGGGCAATGGGAA
AGGGCGCCCGAGCCCAAGGTACAGGCTCAATGGCCATTTTCGCAAGAATT
TACAAGCGGCTTTGACGAACCAGTTGGCAGGTCCATGGAGCATGGGAACG
GCTCTGGAAGAGAAAGCAGCGCCCGATGCAGCTTTGCCTCCATTGCTTCC
GTCGGAAGAGCTGGAAACATACATGTGTGACAAGTGGAACGGGGTCCTGC
ACTATTTGGTTGGGGCCGAGGGGGCGGGTTTCCCCGACCCTGCGGAGGAG
GTGAAGCAATTCTTGGCAGACACGGGAATGATGGCGGTCCCGGAGGAGGA
AGGGGAGGAGGGGGAGGGGGAGGGGGAGGGGGACGTGGTATTGATGGAAG
TGGAAGGGACGATGGGGAAGGAAGGGAAGGGAAGGCGGCACTTGCGCATC
ACGAACGCCGGCATCGATTTTTTGTTGAAGGACGTCCATCTTCAGGTCTG
GCGCTTCGTTGCCTACGTGATCGCGCACGAGGCAGCTTCCCGCGACGAGA
TCCTTACCTTCCTCTTTCAACTCTCCTACTGCGCAGTGGGGCGGCCGTAC
CCGGTCAGGGCCCTGTCGCCGACCCAGCAGGCCCTTCTCGAGAAGTTCAT
CTCCTTCGGCCTCATTTATCAGGACGACCGTCATTCGCGCCATTTTTATC
CGACTGCGGTGGCGGTGAATTTGATTTTTGGCGGCACGGTCCAGGAAGAG
CGCCTGCGTCGCGGCCACGGGCATGTCAGACCCGAGGGTCGGGAGAATAC
GAAGGTGAGAGTGGGGGGATGTGCGTGGAGGCATTGGGCGTCGTGGATCT
GTGGGTTAAGGAAAGGGAGGCGTCCTCGCACCGTCACCTTCCTATCTTCC
CCCTCCCATCCCGTCACCCGCACGTCCATCCAGGCCAGGGCACAGCCCTT
AGCGACCTCCCCTCCTTTGCTTCTCATTGTGTGCCTGATCCCGTTCCCCC
TCCTTCCTCCCTTTCCCTACAGGAGCTCCGCCTGGTGGATCCCTCCCAAC
TCGCCGTCATCGTTGAGACCAACTACCAGCTCGTTGCCTACACCTCCTCC
TCTTTGCACGTGGAGATGCTGCGGATTTTTACGGACGTTCGCTGCCGCCT
TCCCAACGTTGTGATTGGCTTTATCACCCGTGCCAGTGTCCGCCGCGCCA
TGGCTTCCGGCATCACCGCCGCCACCATCCTCTCCTTCTTGAAGACCCAC
ACCCACGTGGCGGTCCGTGCGGGAAAAGGCAGGCTTCTCCCCGAGAACGT
GGAGGCGCAGATCGAGCTCTGGCACCAGGAGCGAAGCCGGGTGAAATTTG
AGGAGGTGATGATGATCGATTTGTCCAGTTTAATGGTGGAGGAGTTCGAG
GAGGTACGGACGTATGCAGAGAACCTGGCGGTCGTGTGTTGGGCGAGCCA
AAGGAGGGGGGGGCGGGCTGGGGAGGCAGAGGAAGAGGAGGAAGAGAGGG
GCATGGGGGAAATCCGGGGTCCCGAGGGGGGGCGTCGTAAGCGCAAGCAG
TTACTAGCGGTGCGACCGGAAGGTCTAGAGAGGATTCGAGCGTTTGTGGA
AGACCGAGGTTATACGCAGCACTAGCAGCTATGGGCGAGGAGCGGGAAGG
CGGGCGGGAGGGCGGGCGGGGGAGTTGGACGGTCCATGCCGCTGGAGCTA
GGGGGAAGAGGGAATTTCCAATATACCCACGGCGATCTCGGTGCTCGGGC
CTGCCTCTAGACCTGGACCCATGCTTGTATGCGCATGGAGGGGGGTTTGC
ACCCTAGACATTCACGTGTAACTATAGTCATTCGGATGTAATTCTCTGCT
GGCGTGACCTAGACATAGAAAAGCAAGTCTTCGATCAGTCCTTCGCATTG
ATTTGGTACTTGATAATCACTAATTCGTGTACGACGTTACGCTCCCTGCG
ACAAGCTGTCCCCTGAGTAAGTTGATGGATTTCTTCATCAATACGCGTCA
AAGTCAACACAGAAACACGCTTTTGAGAGCGTGAAAGTC
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protein sequence of rna2755

>rna2755-protein ID=rna2755-protein|Name=rna2755|organism=Nannochloropsis gaditana|type=polypeptide|length=187bp
MALRRCLPKSTAVLAVVGLLSMCLSHSTAFILPARTPQPPKATSTTTSTK
SLAPSRTDPISRNQVKWYRVASVLALILLPTAHNSPAHAFDAKGARLFEN
NCASCHVAGTNIIGYARGKTLKEEALSKYKFNTRASIVNLLTEGKGVMPK
YSSYTRKNGDVVPAKLTEQEMGQVADYVLEQAKAGWK
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mRNA from alignment at CM002459.1:1129171..1130278+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2755 ID=rna2755|Name=rna2755|organism=Nannochloropsis gaditana|type=mRNA|length=1108bp|location=Sequence derived from alignment at CM002459.1:1129171..1130278+ (Nannochloropsis gaditana)
ACTACCCGTTCCACAATATTATGCCCGCGAGCGCACAAAACATGATATAT
TTACATCCTAACAAATTTTAATATCTCCTCAATCAAAGCGCTTGTCTTGG
CAGAAGCTGGTATGGCCCTCCGTCGCTGCCTTCCAAAATCCACAGCGGTC
TTGGCTGTGGTAGGACTCCTCAGTATGTGCCTGTCTCACAGCACCGCCTT
CATCCTTCCTGCTCGCACGCCTCAACCACCAAAGGCTACCAGCACAACTA
CTTCTACTAAATCCTTGGCCCCATCAAGGACCGATCCAATCTCAAGGAAC
CAAGTGAAATGGTACCGAGTAGCCTCTGTCCTTGCccttatcctccttcc
cactgcCCACAATTCCCCCGCCCATGCTTTCGACGCCAAGGGTGCCCGCC
TCTTTGAGAACAACTGTGCAAGTTGTCACGTAGCAGGCACAAATATCATT
GGGTGAGTGACGAAAACGGCGTACTCTTTTGCACACGCTTTCTATCTCTG
TAGCTGCGAATGCGCCCCCCTAGACGTTTTCCCCCGCATTCCTCTTCGAG
GGCTCACGCACCACTCCATTTCATTCTTTCTGTGCACCTTATCAGATACG
CTCGCGGGAAAACCCTGAAAGAAGAAGCCCTCAGCAAGTACAAATTTAAC
ACGCGCGCCTCCATCGTCAACCTCTTAacggaaggaaaaggtgtCATGCC
CAAGTACAGCAGCTACACGAGGAAGAACGGGGACGTGGTGCCGGCAAAAT
TGACGGAACAAGAGATGGGGCAGGTGGCGGACTACGTCTTGGAGCAGGCC
AAGGCCGGATGGAAatgaggggaggatggaggaatcCAGCCGCGTGGGAG
AttcctcgttccctcttcACGAGTGCGCTGGGCGTGATTTTTGAAAGGCT
CGGTCGAAGCCTTGCCTTGTGTTGACGGTGCTCTGCCGAGATTAAAAACT
TGCAATGGCAGCGTCCGCTTTGGATGGAATCGCTGAAAGAAATAACGAGG
GATGTCTGGCCGCAATGACCTGCATGCAACCCTACCGTGCCGTGCCGGTC
CACATTCCCGACCCCtttgcttttcctccatgcAAGCGgctcaatccctc
cctcctcc
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Coding sequence (CDS) from alignment at CM002459.1:1129171..1130278+

>rna2755 ID=rna2755|Name=rna2755|organism=Nannochloropsis gaditana|type=CDS|length=1128bp|location=Sequence derived from alignment at CM002459.1:1129171..1130278+ (Nannochloropsis gaditana)
ATGGCCCTCCGTCGCTGCCTTCCAAAATCCACAGCGGTCTTGGCTGTGGT
AGGACTCCTCAGTATGTGCCTGTCTCACAGCACCGCCTTCATCCTTCCTG
CTCGCACGCCTCAACCACCAAAGGCTACCAGCACAACTACTTCTACTAAA
TCCTTGGCCCCATCAAGGACCGATCCAATCTCAAGGAACCAAGTGAAATG
GTACCGAGTAGCCTCTGTCCTTGCccttatcctccttcccactgcCCACA
ATTCCCCCGCCCATGCTTTCGACGCCAAGGGTGCCCGCCTCTTTGAGAAC
AACTGTGCAAGTTGTCACGTAGCAGGCACAAATATCATTGGATACGCTCG
CGGGAAAACCCTGAAAGAAGAAGCCCTCAGCAAGTACAAATTTAACACGC
GCGCCTCCATCGTCAACCTCTTAacggaaggaaaaggtgtCATGCCCAAG
TACAGCAGCTACACGAGGAAGAACGGGGACGTGGTGCCGGCAAAATTGAC
GGAACAAGAGATGGGGCAGGTGGCGGACTACGTCTTGGAGCAGGCCAAGG
CCGGATGGAAatgaATGGCCCTCCGTCGCTGCCTTCCAAAATCCACAGCG
GTCTTGGCTGTGGTAGGACTCCTCAGTATGTGCCTGTCTCACAGCACCGC
CTTCATCCTTCCTGCTCGCACGCCTCAACCACCAAAGGCTACCAGCACAA
CTACTTCTACTAAATCCTTGGCCCCATCAAGGACCGATCCAATCTCAAGG
AACCAAGTGAAATGGTACCGAGTAGCCTCTGTCCTTGCccttatcctcct
tcccactgcCCACAATTCCCCCGCCCATGCTTTCGACGCCAAGGGTGCCC
GCCTCTTTGAGAACAACTGTGCAAGTTGTCACGTAGCAGGCACAAATATC
ATTGGATACGCTCGCGGGAAAACCCTGAAAGAAGAAGCCCTCAGCAAGTA
CAAATTTAACACGCGCGCCTCCATCGTCAACCTCTTAacggaaggaaaag
gtgtCATGCCCAAGTACAGCAGCTACACGAGGAAGAACGGGGACGTGGTG
CCGGCAAAATTGACGGAACAAGAGATGGGGCAGGTGGCGGACTACGTCTT
GGAGCAGGCCAAGGCCGGATGGAAatga
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Synonyms
Publications