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Properties
| Property Name | Value |
|---|
| Product | NMD3 family protein |
| Orig transcript id | gnl|cribi|Naga_100008g135.7852.mrna |
| Orig protein id | gnl|cribi|Naga_100008g135.7852 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1123128..1125292 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2753 ID=rna2753|Name=rna2753|organism=Nannochloropsis gaditana|type=mRNA|length=2512bp
GCAAAACGAGGACACTCCATGTCGTGAAAGAAGGCTTTGTGATATCGAAG
GGGGGCGTGCGGTCGTGGCGGCTTCATAAAGGTTGTGGAAGTGGGATTAA
TCGGGTTGTGCGGAGAGGTTGCGGGTTAGTATCATATCCCGGCCGATTGA
TTCTCTAGCTTCACCTTACCTTTTTTATGTGACCCCAGGGACAAAGGCCG
ATGTTCTTCACGAGAAGACTACACAAAGGCGTTCTGGAACACTCTGCTTC
GTCGGACGCGCTCACAGCCTTCCCACTCGTTTTCTCCTTTTCCCCTGCAC
GACAGCGTGGCATCATGAAGCTGTTGCTTGGCATTTGTGTCATAGGGGCT
GCCCTGACGCAGGGCTTTTTAACCCCAACGCCGATGCACCAAGCATTCCA
AGACACACGTACTCAACACCGTCGATTTGCATCCAGGACACTTAAAGCTG
TGGTAGACCCTGGCCACGTGGCGGAGGTGGTGCACACCCACCTCCCCTCA
TCGTCGGTCTGGCTTTTGCAGACACTTCAAGGGGTAGCGGATGCTGCCGC
AGCCACAGCCCCCGATACTGCAGGAGCCGTGGAAGGTAGCAAAGAGATGA
CTGGTGCAGCTGCGGCCGCCGCTGCGAACAATGGCGGGTGGCTGGCGGCT
CCCATTGGCGCGATTGAGAAAGCCATTACCTTCATGCACGAAACTTTGGA
GGGCGCCGGGTTGCAAAATACCTACGGCCTGTCCATTATCGCCTTCACCG
TCCTCGTCAAACTTGTGACGCTGCCTCTGAACTACAAGCAGATCGAAAGC
ACGACGAAAATGCAGGCCATCCAACCGAAAATGAAGGAAATCCAAGCCAA
GTACAAGAGCGACCCCACCCTCCAACAACAGAAAATGGCCCAGCTCTATT
CCGACAACAACGTCAACCCCCTCGCGGGCTGCCTTCCTGCGTTGGTGCAG
ATCCCCATCTTCATCTCCCTGTACCGGGCCTTGACGAATTTGGCCGCCGC
CAACGAATTGAATGAGCCTTTTCTCTGGCTACCCAATTTGGAGGGACCGA
CCTATGGGGCGGGCCCAGCGGACGGGATGAATTGGCTGAAGCAGTGGGAA
GGCTTTACCCCCTCTCTGGGCTGGCACGACACCATCGCTTTTTTGACGGT
ACCTTTGATTCTGATCGTCTCCCAGAGCATCTCCCAACAAATCTTGCAGC
CCGCCGCGAACAAGGACGATCCCAACGCGCAGCAATCCCAGGCCATCCTC
AAATTTCTCCCCTTCATGGTCGGCTACTTCTCCCTGAACGTGCCCTCAGG
CCTGGGGGTGTACTGGATCGCCAACAACTTGATCACCACCCTCACCACGG
TGGCCGTCAGGGCCGTCATACAAGGCAAGGAGGAGGAAGCCGTTGCCGGA
GGGGGGGGGGGGGGGCACCTCCGTGATCTCTCCTGTGGATGAAGGTCCCC
GACGTGGGTTTGGCCGCGCCCCTCCCCCACCTCCGGCCCCGAAACAGGAG
GTGGAGGACGTGGACGACGAGTCGTCGTCTTCGGCGGGGGTGGAAAAACG
TAAATTCGGGGGGCTTCCCGCCGTGGGGGTGAGCCAGGATGAGCGCTTGG
GCCGGACGGAGAAGGGTTCGACGGTGGAGGTGTTGAAGGAGGAGGGGGGC
TTGACGGTCCTCAGGGAGGTGAAGGACGGGGAAGTGGTGTCCACGACGGT
ACGGTTGACGCCGGAGGAGATGAAGCGACGGCGGGAGGCATTGGCCAGGG
GGGAGGATCCGGCCGCGGTCGGCCCACCGACGACGCCGAAAACCCCCGAG
CCCAGCAATGATCCGAGGCAGAATAAACGGTCGAAACGCCGGAAGAAATA
GAGGGGCGGGGGGGGGGGAGGAGGAAGTATGCGTTGTATACAAGGAGGTG
GGAGGTGATGGAGGGTGACAGGGGGCGTGGCCTTCTGAGAAGGGCAGAGG
GGGAGGCCAGGGGGCAAGGGGAGGGGAGGGCAGGAAAAATGGTGGACGAG
AAAGATTTTTACAGCCCCAGGTGGCTATTCTCATGTTCTTATACAAGCGC
GGCGCAAGTGCATTCGGTGTTTGATCTCAGTACTGACAGCCCCGCGTGGG
CGCCAAGCATGCTCTGATTGTTGGAAAGCGGTGGAAGAAATTGAGGGAAA
TGGCGGGTTTGCTTTTTTGGGTGCAATTTGACGCAAGGAGAGGGTATCAG
AGTGGAGGAGTGCGTGGTGGCGAAGAGGGACGGGAGGGGGGAGAGGCAGA
GAGGGAGATAGAAAGAGAGGAAGAGGGAGAGGAGGTGAGAGGAGGGGAGG
GAACAGGACAAGTGAAAGCAAGCGGAAGAAAAGGAGAACCTCGCGACGCA
AGCCGAGCGATCATAAGCGTCGAAGAAGCGACTGGAAAAGACTAACAATG
TGGCTCACGTTAGTGTCACCGTCCAACAGGAACCCTGATGTTTGACAGAT
GTCTCGCATCTCAGCATGTCTGGCCCGAATGCTTTCAATTCGCTTGTGTA
CGCGTCTCTGGT back to topprotein sequence of rna2753 >rna2753-protein ID=rna2753-protein|Name=rna2753|organism=Nannochloropsis gaditana|type=polypeptide|length=551bp
METTAIPLTRTAARVLCPLCGLSMESNAANRCGNCVRNEIDLQGEIKPSR
PLIQCKQCFHWQAKSKHWVAAELESRELLALVLKFVPGLHKGGSGPRGGD
GPMEVVEAGWIWTEPHSKRLKLKLTVRKEVLNGVMVQQRVQAEFVVRTIQ
CDACALSYTEQAWKAVCQLRQRVTHKRTFFFLEQLLLARKMESKILDMEL
TRHGMDLYFGDKNTALQFLAFLQTAVPMRSKTTRKLIAEDRQNNVHRSQW
SMSVDIVPLCKDDLCFLPPGGGGVQGLVLVSRVTAVVQFLDPLTLKTGEM
TAAKYWKAPVECLMQSGDLIPYEVLDVELIRPRRGEGKGGRDKGQRKAGY
PEGGNGPSRKWQLAEVEIIKSSDFGVRDVTHRVVSHLGHLLAVGDTVLGY
DLGTATALGEREGGWRGMKHEPPDVVLVRRVDVEKKGAKRERRRLRRLQA
RRARRAAEREGNGEGAGARGRDRKEEVEGEEKAEADFLAFAEELEEDLEM
QALIAREESAARQRMAMEEEGEGWEEEERGWEELGEEGWNDGTVGGREDG
Q back to topmRNA from alignment at CM002459.1:1123128..1125292- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2753 ID=rna2753|Name=rna2753|organism=Nannochloropsis gaditana|type=mRNA|length=2165bp|location=Sequence derived from alignment at CM002459.1:1123128..1125292- (Nannochloropsis gaditana)
ATGGAGACGACTGCCATTCCGCTGACACGAACAGCGGCCCGTGTTCTTTG
CCCTTTGTGTGGTTTGTCCATGGAAAGTAATGCTGCCAACCGCTGCGGAA
ATTGCGTGCGAAATGAGATCGATTTGCAAGGGGAAATCAAGCCCTCCCGT
CCTTTGATCCAATGCAAGCAATGCTTTCACTGGCAGGCCAAATCGAAACA
TTGGGTGGCGGCTGAGCTTGAGTCCCGCGAACTACTGGCATTGGTGCTCA
AGTTTGTCCCGGGCCTTCACAAAGGTGGAAGTGGACCGAGGGGTGGAGAC
GGACCTATGGAGGTGGTGGAGGCAGGATGGATTTGGACGGAGCCGCACTC
GAAACGGTTGAAGTTGAAGTTGACGGTTCGAAAAGAGGTACTGAACGGCG
TGATGGTGCAGCAAAGGGTGCAAGCCGAGTTTGTCGTGCGGACCATACAG
GTGAAGGGGAGGGGAGAGAGGTCAAAGGGAAAGGAAGCGCGCGTGGACTC
ATCGCCGTCGATGGCATGTTCTGGATATTCTTCGTGCCTCGAGAACCCCA
AACCTGTCTTATTCCTCCATAATCCTCCCTTTTCCCTCCCCATTCCACCC
CAGTGCGACGCCTGCGCCCTGTCCTACACGGAGCAGGCCTGGAAGGCCGT
GTGTCAGCTTCGACAGCGGGTTACCCACAAACGGACTTTTTTTTTCCTGG
AACAGCTCCTTCTCGCCCGGAAGATGGAGAGCAAGATCTTGGACATGGAG
CTGACCCGCCACGGGATGGACCTATACTTTGGAGACAAGAATACAGCCCT
GCAATTTTTGGCCTTCCTTCAAACCGCCGTCCCCATGCGGAGTAAAACTA
CCCGGAAGTTGATCGCCGAAGACCGGCAGAACAACGTCCACCGTTCCCAA
TGGTCCATGTCCGTTGATATCGTCCCTCTCTGCAAAGACGACCTCTGTTT
CCTGCCTCCCGGCGGGGGGGGAGTGCAGGGGCTGGTGCTGGTCTCCCGGG
TCACCGCCGTCGTTCAATTCCTCGACCCTTTGACCTTAAAAACGGGGGAA
ATGACCGCTGCCAAGTATTGGAAAGCTCCTGTCGAGTGCTTGATGCAAAG
CGGGGACCTGATCCCCTACGAAGTGCTGGACGTGGAGCTAATACGCCCAC
GGCGGGGGGAGGGGAAAGGAGGGCGGGACAAGGGACAGAGGAAGGCAGGA
TACCCGGAGGGAGGGAACGGTCCATCTCGGAAGTGGCAGCTTGCGGAGGT
CGAAATCATTAAGTCTTCGGATTTTGGGGTCCGGGACGTGACGCACCGGG
TCGTGTCGCACCTGGGTCATCTCCTTGCGGTTGGGGACACTGTGCTGGGC
TACGATCTGGGCACTGCCACGGCGCTGGGGGAGAGGGAAGGGGGATGGCG
GGGAATGAAACACGAGCCGCCCGACGTGGTGTTGGTGCGGCGGGTGGACG
TGGAGAAAAAAGGCGCGAAAAGAGAGAGGAGGCGGTTGCGGCGTTTGCAG
GCCCGGCGGGCCCGGCGGGCAGCGGAAAGGGAGGGGAATGGGGAGGGAGC
GGGGGCGCGGGGAAGGGATAGGAAGGAGGAAGTGGAAGGGGAGGAAAAAG
CGGAGGCGGATTTTTTGGCCTTTGCGGAGGAATTGGAGGAGGACTTAGAG
ATGCAGGCGTTGATTGCGCGGGAAGAGTCTGCCGCGAGGCAACGCATGGC
AATGGAGGAAGAGGGGGAGGGATGGGAAGAGGAGGAGAGGGGCTGGGAGG
AGCTGGGAGAAGAAGGGTGGAACGACGGCACGGTGGGCGGAAGAGAGGAC
GGGCAATAAGGGACAAAAGAAGACCAGAGGAGGAGAAAGCGCCCTGCCTT
CATCTTCAGCATGTCTAGGGCTGGAAAACCAAGGGTGTGGGGTTGGTTTG
GGCGGAAGAAAGGGGGGATCATGTAAGTGGACACCCCTGCTTGAGCACGG
GGATGTACAGGGGCGAAGCGTTGCAACACACTGTAAAGGCTGGTAGCAGA
CCGTGGGAAGGCGGTGCTCGATCTGCCGAGTCAAGGCGACCAGAGACGCG
TACACAAGCGAATTGAAAGCATTCGGGCCAGACATGCTGAGATGCGAGAC
ATCTGTCAAACATCAGGGTTCCTGTTGGACGGTGACACTAACGTGAGCCA
CATTGTTAGTCTTTT back to topCoding sequence (CDS) from alignment at CM002459.1:1123128..1125292- >rna2753 ID=rna2753|Name=rna2753|organism=Nannochloropsis gaditana|type=CDS|length=3312bp|location=Sequence derived from alignment at CM002459.1:1123128..1125292- (Nannochloropsis gaditana)
TGCGACGCCTGCGCCCTGTCCTACACGGAGCAGGCCTGGAAGGCCGTGTG
TCAGCTTCGACAGCGGGTTACCCACAAACGGACTTTTTTTTTCCTGGAAC
AGCTCCTTCTCGCCCGGAAGATGGAGAGCAAGATCTTGGACATGGAGCTG
ACCCGCCACGGGATGGACCTATACTTTGGAGACAAGAATACAGCCCTGCA
ATTTTTGGCCTTCCTTCAAACCGCCGTCCCCATGCGGAGTAAAACTACCC
GGAAGTTGATCGCCGAAGACCGGCAGAACAACGTCCACCGTTCCCAATGG
TCCATGTCCGTTGATATCGTCCCTCTCTGCAAAGACGACCTCTGTTTCCT
GCCTCCCGGCGGGGGGGGAGTGCAGGGGCTGGTGCTGGTCTCCCGGGTCA
CCGCCGTCGTTCAATTCCTCGACCCTTTGACCTTAAAAACGGGGGAAATG
ACCGCTGCCAAGTATTGGAAAGCTCCTGTCGAGTGCTTGATGCAAAGCGG
GGACCTGATCCCCTACGAAGTGCTGGACGTGGAGCTAATACGCCCACGGC
GGGGGGAGGGGAAAGGAGGGCGGGACAAGGGACAGAGGAAGGCAGGATAC
CCGGAGGGAGGGAACGGTCCATCTCGGAAGTGGCAGCTTGCGGAGGTCGA
AATCATTAAGTCTTCGGATTTTGGGGTCCGGGACGTGACGCACCGGGTCG
TGTCGCACCTGGGTCATCTCCTTGCGGTTGGGGACACTGTGCTGGGCTAC
GATCTGGGCACTGCCACGGCGCTGGGGGAGAGGGAAGGGGGATGGCGGGG
AATGAAACACGAGCCGCCCGACGTGGTGTTGGTGCGGCGGGTGGACGTGG
AGAAAAAAGGCGCGAAAAGAGAGAGGAGGCGGTTGCGGCGTTTGCAGGCC
CGGCGGGCCCGGCGGGCAGCGGAAAGGGAGGGGAATGGGGAGGGAGCGGG
GGCGCGGGGAAGGGATAGGAAGGAGGAAGTGGAAGGGGAGGAAAAAGCGG
AGGCGGATTTTTTGGCCTTTGCGGAGGAATTGGAGGAGGACTTAGAGATG
CAGGCGTTGATTGCGCGGGAAGAGTCTGCCGCGAGGCAACGCATGGCAAT
GGAGGAAGAGGGGGAGGGATGGGAAGAGGAGGAGAGGGGCTGGGAGGAGC
TGGGAGAAGAAGGGTGGAACGACGGCACGGTGGGCGGAAGAGAGGACGGG
CAATAAATGGAGACGACTGCCATTCCGCTGACACGAACAGCGGCCCGTGT
TCTTTGCCCTTTGTGTGGTTTGTCCATGGAAAGTAATGCTGCCAACCGCT
GCGGAAATTGCGTGCGAAATGAGATCGATTTGCAAGGGGAAATCAAGCCC
TCCCGTCCTTTGATCCAATGCAAGCAATGCTTTCACTGGCAGGCCAAATC
GAAACATTGGGTGGCGGCTGAGCTTGAGTCCCGCGAACTACTGGCATTGG
TGCTCAAGTTTGTCCCGGGCCTTCACAAAGGTGGAAGTGGACCGAGGGGT
GGAGACGGACCTATGGAGGTGGTGGAGGCAGGATGGATTTGGACGGAGCC
GCACTCGAAACGGTTGAAGTTGAAGTTGACGGTTCGAAAAGAGGTACTGA
ACGGCGTGATGGTGCAGCAAAGGGTGCAAGCCGAGTTTGTCGTGCGGACC
ATACAGTGCGACGCCTGCGCCCTGTCCTACACGGAGCAGGCCTGGAAGGC
CGTGTGTCAGCTTCGACAGCGGGTTACCCACAAACGGACTTTTTTTTTCC
TGGAACAGCTCCTTCTCGCCCGGAAGATGGAGAGCAAGATCTTGGACATG
GAGCTGACCCGCCACGGGATGGACCTATACTTTGGAGACAAGAATACAGC
CCTGCAATTTTTGGCCTTCCTTCAAACCGCCGTCCCCATGCGGAGTAAAA
CTACCCGGAAGTTGATCGCCGAAGACCGGCAGAACAACGTCCACCGTTCC
CAATGGTCCATGTCCGTTGATATCGTCCCTCTCTGCAAAGACGACCTCTG
TTTCCTGCCTCCCGGCGGGGGGGGAGTGCAGGGGCTGGTGCTGGTCTCCC
GGGTCACCGCCGTCGTTCAATTCCTCGACCCTTTGACCTTAAAAACGGGG
GAAATGACCGCTGCCAAGTATTGGAAAGCTCCTGTCGAGTGCTTGATGCA
AAGCGGGGACCTGATCCCCTACGAAGTGCTGGACGTGGAGCTAATACGCC
CACGGCGGGGGGAGGGGAAAGGAGGGCGGGACAAGGGACAGAGGAAGGCA
GGATACCCGGAGGGAGGGAACGGTCCATCTCGGAAGTGGCAGCTTGCGGA
GGTCGAAATCATTAAGTCTTCGGATTTTGGGGTCCGGGACGTGACGCACC
GGGTCGTGTCGCACCTGGGTCATCTCCTTGCGGTTGGGGACACTGTGCTG
GGCTACGATCTGGGCACTGCCACGGCGCTGGGGGAGAGGGAAGGGGGATG
GCGGGGAATGAAACACGAGCCGCCCGACGTGGTGTTGGTGCGGCGGGTGG
ACGTGGAGAAAAAAGGCGCGAAAAGAGAGAGGAGGCGGTTGCGGCGTTTG
CAGGCCCGGCGGGCCCGGCGGGCAGCGGAAAGGGAGGGGAATGGGGAGGG
AGCGGGGGCGCGGGGAAGGGATAGGAAGGAGGAAGTGGAAGGGGAGGAAA
AAGCGGAGGCGGATTTTTTGGCCTTTGCGGAGGAATTGGAGGAGGACTTA
GAGATGCAGGCGTTGATTGCGCGGGAAGAGTCTGCCGCGAGGCAACGCAT
GGCAATGGAGGAAGAGGGGGAGGGATGGGAAGAGGAGGAGAGGGGCTGGG
AGGAGCTGGGAGAAGAAGGGTGGAACGACGGCACGGTGGGCGGAAGAGAG
GACGGGCAATAAATGGAGACGACTGCCATTCCGCTGACACGAACAGCGGC
CCGTGTTCTTTGCCCTTTGTGTGGTTTGTCCATGGAAAGTAATGCTGCCA
ACCGCTGCGGAAATTGCGTGCGAAATGAGATCGATTTGCAAGGGGAAATC
AAGCCCTCCCGTCCTTTGATCCAATGCAAGCAATGCTTTCACTGGCAGGC
CAAATCGAAACATTGGGTGGCGGCTGAGCTTGAGTCCCGCGAACTACTGG
CATTGGTGCTCAAGTTTGTCCCGGGCCTTCACAAAGGTGGAAGTGGACCG
AGGGGTGGAGACGGACCTATGGAGGTGGTGGAGGCAGGATGGATTTGGAC
GGAGCCGCACTCGAAACGGTTGAAGTTGAAGTTGACGGTTCGAAAAGAGG
TACTGAACGGCGTGATGGTGCAGCAAAGGGTGCAAGCCGAGTTTGTCGTG
CGGACCATACAG back to top
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