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Properties
| Property Name | Value |
|---|
| Product | Membrane insertion protein, OxaA/YidC |
| Orig transcript id | gnl|cribi|Naga_100008g132.7901.mrna |
| Orig protein id | gnl|cribi|Naga_100008g132.7901 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1120743..1123254 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2752 ID=rna2752|Name=rna2752|organism=Nannochloropsis gaditana|type=mRNA|length=1935bp
TGGACGATCGAAAGTCATGGTATTTACGACCATTTTTATGTTGTCTTTGC
GCACACTACAGATTTGTTCATCTCTGAAGATTTAACCTGAAGGCGCTTTG
GTTCCTCTTTGGGAATGGTTGTTTGAAATTCCTTCCCGCAGAAATTCGAT
CCCGGAGCAAAGGCAATCTTTTCGAGATCGAGAACGTGGACTGCGTAGGA
GAGGTCTTAAGCGTGATTCATACAAGCTGGTCATCGAAGTACAGAACCGC
CTTGCAGGATGGCCGCTTCAGAGCTCCCGAGTTCAGGGAATGTACCTCAT
GGTCTCGGCCAGGTTCAGGGCCCAGCTGGCGCGACAACTGGAATGCCAAC
GCCTGACATTGATTCGGATCTGCATTTGATATGGCCTGAGGAAGAGGATG
GCTTTGGCTGGGATGAACAGGAGGACCAAGTGATTGGCCGGGAGGAAGAG
GAGGAACCGGCAGCAGGGGAGGAGGATCAGGGCTCGAGGTACGTGCATGC
ACATTCCCTGACTTGCGTAGATGGCCCATGTGCCTGACCGTGCCCGAAAG
TGTGTCTTATGCTGTCTTGTCGGCGCTTGTCTCATGCCCCCTCTTCGGGG
TCGGACGTGTCCATGTCGATAGGCGCCTCCCCCGCATCCATCGCACCTCC
CCATCCCGCCAGTCCTTTCTTGGCCCGATTCATGACGTGCTCTTTCGCTG
GAAAAGAGGTAGAATCGGCGTTATCTCAACCACTTACAGTGACTCTTCCC
TCCCTTCCCTCCACCACACCCTCCTTCCTCAATCCTTCCCCTGCCCACCC
CGCCTGCCTGACGAAGCGCGTCCTTGCCATCAATGCCGTTCATCAACCTG
GAGCGAGACGACGCAGAGACGGATGCACCAGATGAGGAGGAGGACGAGCC
CAGCTATATGCACCAGCCTCCTACCCCTCTCCCTCTATTCCATCCTCCCC
CGCCCCCTCTCTCCTTCCTCCCTTCCTCTTCCTTCCCCTCCCCCCCCCCC
ATTGTCGCCCCTCCTACCTGTCTGCTTTCATTGTCCGCGGGCCCTTCGTT
GCCGGCTATGGGCCTGTGTACCCTGCAGCGGGAGCCACCGGGAGGGGGGG
AGGCGGCAACGGGGAAGGAGGAGGAGAGGGCCGTCCCGGCGTGGGATGTA
AGGGACCGGTGGGAGTGGAGGAGGAGGACTGGAAGCGGGGAAAGAGGCCT
TGCGAGGGGATGATAGGACGGGAAGACGCGCTGGGCAAGGTTTGAGGAAA
AGTGAGGGGCATTTTGGGTGTTCATAACCGTCGGTTAGATCCAATCACCG
GGATCAGGAAGGAGGCATCAGGACGCGCGGGACCCTCTTGCGGCCCTTGC
CTTTCTCATGGCGCGTAGGGGAGATGGATGGAATGCTGCGGCTTGCCTGA
CTGGTGGCGGTAGGGGCTTCGCGGTGGAGGAGAGGGCATGGAAGGGAAAT
CTGGTGTTCGAATCTTCAAAGATTTAGCACGTCTGCGAGAGGCGATGGTC
TTGTTTCGAGGAGTGGAGAGAGATGAGGTTGCCTGAGGGGCGCTCTGTAG
AGAACTAGGAGAGAAGTTTCGGGTACTTTTGTATGACTAGAGCCACAGTA
CCCCGCATGTGAAAGGGAGCCTGAACGCAAGAAAAGAAGAGAGGCAAGCG
ACCCAGCAGGTGTCAACAGGCTACCCCATCCGTGCTGAGGAAAGGGGCCT
TCGCATGCATCGAGGTAGTGGGGCTGGCTGCCGGTGGAACAGACGAACGT
CCACGCCCAAACGTGTAATACAACCTGCAAGGGTTTGAAAGCCGAGAACC
CAATTAAGTGATCAGGCACTGAGGTGCCCCCGACGAAGTCCCCAAAGAAA
TTCCACGGCGGGCACACAGGCATTGAACGGGCGGATGGGGGTCGCGGATA
CCCATCCGAAAAGCAGCGCGCCCAGACAGCATACA back to topprotein sequence of rna2752 >rna2752-protein ID=rna2752-protein|Name=rna2752|organism=Nannochloropsis gaditana|type=polypeptide|length=413bp
MFFTRRLHKGVLEHSASSDALTAFPLVFSFSPARQRGIMKLLLGICVIGA
ALTQGFLTPTPMHQAFQDTRTQHRRFASRTLKAVVDPGHVAEVVHTHLPS
SSVWLLQTLQGVADAAAATAPDTAGAVEGSKEMTGAAAAAAANNGGWLAA
PIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIES
TTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQ
IPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWE
GFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAIL
KFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKEEEAVAG
GGGGGHLRDLSCG back to topmRNA from alignment at CM002459.1:1120743..1123254+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2752 ID=rna2752|Name=rna2752|organism=Nannochloropsis gaditana|type=mRNA|length=2512bp|location=Sequence derived from alignment at CM002459.1:1120743..1123254+ (Nannochloropsis gaditana)
GCAAAACGAGGACACTCCATGTCGTGAAAGAAGGCTTTGTGATATCGAAG
GGGGGCGTGCGGTCGTGGCGGCTTCATAAAGGTTGTGGAAGTGGGATTAA
TCGGGTTGTGCGGAGAGGTTGCGGGTTAGTATCATATCCCGGCCGATTGA
TTCTCTAGCTTCACCTTACCTTTTTTATGTGACCCCAGGGACAAAGGCCG
ATGTTCTTCACGAGAAGACTACACAAAGGCGTTCTGGAACACTCTGCTTC
GTCGGACGCGCTCACAGCCTTCCCACTcgttttctccttttcccctgcaC
GACAGCGTGGCATCATGAAGCTGTTGCTTGGCATTTGTGTCATAGGGGCT
GCCCTGACGCAGGGCTTTTTAACCCCAACGCCGATGCACCAAGCATTCCA
AGACACACGTACTCAACACCGTCGATTTGCATCCAGGACACTTAAAGCTG
TGGTAGACCCTGGCCacgtggcggaggtggtgcacacccacctcccctca
tcGTCGGTCTGGCTTTTGCAGACACTTCAAGGGGTAGCGGATGCTGCCGC
AGCCACAGCCCCCGATACTGCAGGAGCCGTGGAAGGTAGCAAAGAGATGA
CTGGTGCAGCTGCGGCCGCCGCTGCGAACAATGGCGGGTGGCTGGCGGCT
CCCATTGGCGCGATTGAGAAAGCCATTACCTTCATGCACGAAACTTTGGA
GGGCGCCGGGTTGCAAAATACCTACGGCCTGTCCATTATCGCCTTCACCG
TCCTCGTCAAACTTGTGACGCTGCCTCTGAACTACAAGCAGATCGAAAGC
ACGACGAAAATGCAGGCCATCCAAccgaaaatgaaggaaatCCAAGCCAA
GTACAAGAGCGACCCCACCCTCCAACAACAGAAAATGGCCCAGCTCTATT
CCGACAACAACGTCAACCCCCTCGCGGGCTGCCTTCCTGCGTTGGTGCAG
ATCCCCATCTTCATCTCCCTGTACCGGGCCTTGACGAAtttggccgccgc
caacgAATTGAATGAGCCTTTTCTCTGGCTACCCAATTTGGAGGGACCGA
CCTATGGGGCGGGCCCAGCGGACGGGATGAATTGGCTGAAGCAGTGGGAA
GGCTTTACCCCCTCTCTGGGCTGGCACGACACCATCGCTTTTTTGACGGT
ACCTTTGATTCTGATCGTCTCCCAGAGCATCTCCCAACAAATCTTGCAGC
CCGCCGCGAACAAGGACGATCCCAACGCGCAGCAATCCCAGGCCATCCTC
AAATTTCTCCCCTTCATGGTCGGCTACTTCTCCCTGAACGTGCCCTCAGG
CCTGGGGGTGTACTGGATCGCCAACAACTTGATCACCACCCTCACCACGG
TGGCCGTCAGGGCCGTCATacaaggcaaggaggaggaagccgttgccgga
gggggggggggggggcacctCCGTGATCTCTCCTGTGGATGAAGGTCCCC
GACGTGGGTTtggccgcgcccctcccccacctccggcCCCGAaacaggag
gtggaggacgtggacgacgagTCGTCGTCTTCGGCGGGGGTGGAAAAACG
TAAATTCGGGGGGCTTCCCGCCGTGGGGGTGAGCCAGGATGAGCGCTTGG
GCCGGACGGAGAAGGGTTCGACGGTGGaggtgttgaaggaggaggggggc
ttgACGGTCCtcagggaggtgaaggacggggaagtgGTGTCCACGACGGT
ACGGTTGACgccggaggagatgaagcgacggcgggaggcattggccaggg
gggaggatccGGCCGCGGTCGGCCCACCGACGACGCCGAAAACCCCCGAG
CCCAGCAATGATCCGAGGCAGAATAAACGGTCGAAACGCCGGAAGAAata
gaggggcgggggggggggaggaggaagtatgCGTTGTAtacaaggaggtg
ggaggtgatggagggTGACAGGGGGCGTGGCCTTCTGAgaagggcagagg
gggaggccagggggcaaggggaggggagggcaggaaaaatggtggacgag
aaagattTTTACAGCCCCAGGTGGCTATTCTCATGTTCTTATACAAGCGC
GGCGCAAGTGCATTCGGTGTTTGATCTCAGTACTGACAGCCCCGCGTGGG
CGCCAAGCATGCTCTGATTGTTGGAAAGCGGTGGAAGAAATTGAGGGAAA
TGGCGGGTTTGCTTTTTTGGGTGCAATTTGACGCAAGGAGAGGGTATCAG
AGTGGAGGAGTGCGTGGTGGcgaagagggacgggaggggggagaggcaga
gagggagatagaaagagaggaagagggagaggaggtgagaggaggggagg
gaacaggACAAGTGAAAGCaagcggaagaaaaggagaaccTCGCGACGCA
AGCCGAGCGATCATAAGCGTCGAAGAAGCGACTGGAAAAGACTAACAATG
TGGCTCACGTTAGTGTCACCGTCCAACAGGAACCCTGATGTTTGACAGAT
GTCTCGCATCTCAGCATGTCTGGCCCGAATGCTTTCAATTCGCTTGTGTA
CGCGTCTCTGGT back to topCoding sequence (CDS) from alignment at CM002459.1:1120743..1123254+ >rna2752 ID=rna2752|Name=rna2752|organism=Nannochloropsis gaditana|type=CDS|length=1242bp|location=Sequence derived from alignment at CM002459.1:1120743..1123254+ (Nannochloropsis gaditana)
ATGTTCTTCACGAGAAGACTACACAAAGGCGTTCTGGAACACTCTGCTTC
GTCGGACGCGCTCACAGCCTTCCCACTcgttttctccttttcccctgcaC
GACAGCGTGGCATCATGAAGCTGTTGCTTGGCATTTGTGTCATAGGGGCT
GCCCTGACGCAGGGCTTTTTAACCCCAACGCCGATGCACCAAGCATTCCA
AGACACACGTACTCAACACCGTCGATTTGCATCCAGGACACTTAAAGCTG
TGGTAGACCCTGGCCacgtggcggaggtggtgcacacccacctcccctca
tcGTCGGTCTGGCTTTTGCAGACACTTCAAGGGGTAGCGGATGCTGCCGC
AGCCACAGCCCCCGATACTGCAGGAGCCGTGGAAGGTAGCAAAGAGATGA
CTGGTGCAGCTGCGGCCGCCGCTGCGAACAATGGCGGGTGGCTGGCGGCT
CCCATTGGCGCGATTGAGAAAGCCATTACCTTCATGCACGAAACTTTGGA
GGGCGCCGGGTTGCAAAATACCTACGGCCTGTCCATTATCGCCTTCACCG
TCCTCGTCAAACTTGTGACGCTGCCTCTGAACTACAAGCAGATCGAAAGC
ACGACGAAAATGCAGGCCATCCAAccgaaaatgaaggaaatCCAAGCCAA
GTACAAGAGCGACCCCACCCTCCAACAACAGAAAATGGCCCAGCTCTATT
CCGACAACAACGTCAACCCCCTCGCGGGCTGCCTTCCTGCGTTGGTGCAG
ATCCCCATCTTCATCTCCCTGTACCGGGCCTTGACGAAtttggccgccgc
caacgAATTGAATGAGCCTTTTCTCTGGCTACCCAATTTGGAGGGACCGA
CCTATGGGGCGGGCCCAGCGGACGGGATGAATTGGCTGAAGCAGTGGGAA
GGCTTTACCCCCTCTCTGGGCTGGCACGACACCATCGCTTTTTTGACGGT
ACCTTTGATTCTGATCGTCTCCCAGAGCATCTCCCAACAAATCTTGCAGC
CCGCCGCGAACAAGGACGATCCCAACGCGCAGCAATCCCAGGCCATCCTC
AAATTTCTCCCCTTCATGGTCGGCTACTTCTCCCTGAACGTGCCCTCAGG
CCTGGGGGTGTACTGGATCGCCAACAACTTGATCACCACCCTCACCACGG
TGGCCGTCAGGGCCGTCATacaaggcaaggaggaggaagccgttgccgga
gggggggggggggggcacctCCGTGATCTCTCCTGTGGATGA back to top
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