rna275, rna275 (mRNA) Nannochloropsis gaditana

Overview
Namerna275
Unique Namerna275
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length426
Alignment locationCM002455.1:697480..698634 -

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Properties
Property NameValue
Productchaperone protein
Orig transcript idgnl|cribi|Naga_100026g41.10665.mrna
Orig protein idgnl|cribi|Naga_100026g41.10665
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:697480..698634 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100026g41gene264Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna275rna275-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30411.1cds275Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna275 ID=rna275|Name=rna275|organism=Nannochloropsis gaditana|type=mRNA|length=426bp
ATGGCAGTGAGCTCTCGTGGAGGGGAAAGCTTCGCGTTTTTGAATCTGTA
CACCGCCACACTCCAGGTGCTCAGCTGCCGCGTGACCGCCCGCATCCTGC
GCACTCCTACTTCTCAGATAGGCGCTAGCAGCGCACCGACGACCAGACAC
TGTCTGCTCCTAATCACACCCGTAAGTTTTTGGGCCTACTGCAAGCATCC
AGAACTCTTCGCAACGCTCCACCCTCTCTCGCCCACGGCACCCGAACGCC
GACCGGAAGACTTCGACTACGATAGCAGCGGAAGAAGAAAGCGGAGGAGG
AGATGCCATTCATCAGCTCAAAGTCAAAATCAAGGACCTTCCAAGTCAAA
GACAAGAGCAAAGTGCCCTGTGCAGAGAACCTCCCCGACCGACAGGAGAC
AAGGAAAGAAAATAAACACCACCTAG
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protein sequence of rna275

>rna275-protein ID=rna275-protein|Name=rna275|organism=Nannochloropsis gaditana|type=polypeptide|length=215bp
MDSPPPRKDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVE
RFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGFLDRLAGIRR
PRPPPGSRKGGFSSSRAFHLVEIALSPRVLVMGIGLAFMTYIALGPREDR
GHSNDLLVPAWYNQRTKRWETPAPWNPDYRAAGSEHHAKVSKYHVFESAP
PASRRMGGAGSNDPV
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mRNA from alignment at CM002455.1:697480..698634-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna275 ID=rna275|Name=rna275|organism=Nannochloropsis gaditana|type=mRNA|length=1155bp|location=Sequence derived from alignment at CM002455.1:697480..698634- (Nannochloropsis gaditana)
ATGGAACAGGCGAGCCCTCCCAAATACAACTCATCTCACCGCCTTTCCAT
TCAACCTGCCCGGGAAAGGGGGGGGCTGGGCACGCCTGGAGGGAGAGAGC
ACACATATTTCGCGAAAAGGAATCCGCTTTCCCAGGCGCCCGTGCGAGCG
AGGCTCCCGGTCCACAACCACGGCACATACCCGTCCCTGCCCACGCCTGC
GCCGCGTCCTTGCTCTTGCTGTCATAGGGTCGATAACTCCATCATCCTTT
CTGCCTTTCGTCTGATTTTAATACGCTAGGAAACCTAGCCCTCCATCATT
CGTGGTAGCGCTTGATGGACTCACCACCGCCAAGAAAGGATTACTACTCA
GTGCTCGGCGTTCCTCGTGACTCGAGCGATGAAGCAATAAAAGCTCGATA
CAGGCAGCTTGCGATGGATTTGCATCCAGATCGGTGTGCAGCAGGCGATT
CAAGCTCTGTAGAGCGTTTTAAAGCAGTTTCAGAGGCCTACAAAGTGCTT
TCAGATAGTGGTCAGCGACGTATCCTGGACGAGTACTTGGAAGGTAGGAG
GTTTGCTGGTGCTCGTCTTCGGGGAGATGAGGGATTTTTGGACCGCTTGG
CTGGGATTCGAAGACCACGACCACCCCCAGGGTCACGTAAGGGTGGATTT
TCCTCCTCCCGGGCCTTCCATCTCGTTGAAATCGCACTTTCTCCCCGTGT
GCTGGTCATGGGGATTGGGTTGGCATTTATGACCTACATTGCTTTGGGAC
CCCGCGAAGACCGTGGGCATTCAAACGATTTGCTGGTACCGGCGTGGTAC
AATCAAAGGTGTGTTTCTCTTGATCGTTTTTTGCACTTTCAGTGCGGGTT
TAACGTTATTTCTAACCTTCATCCTTCTCCACACCGGTTGCACAGAACAA
AGCGGTGGGAGACTCCTGCCCCGTGGAATCCTGACTACAGGGCAGCCGGC
AGCGAACATCATGCCAAGGTTTCTAAGTATCATGTTTTTGAGTCAGCACC
ACCTGCATCGAGAAGGATGGGCGGTGCAGGGTCGAATGATCCGGTGTAAA
TAGTAGTGTAGGTGCGCTCTGTCAGTTTTGCATGTATAGGATTGATCGGG
AGGAAACAACAGGTGCAAGAAGATAAGAAAAGACAAAAGACAAAGCATTT
GACCC
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Coding sequence (CDS) from alignment at CM002455.1:697480..698634-

>rna275 ID=rna275|Name=rna275|organism=Nannochloropsis gaditana|type=CDS|length=1296bp|location=Sequence derived from alignment at CM002455.1:697480..698634- (Nannochloropsis gaditana)
AACAAAGCGGTGGGAGACTCCTGCCCCGTGGAATCCTGACTACAGGGCAG
CCGGCAGCGAACATCATGCCAAGGTTTCTAAGTATCATGTTTTTGAGTCA
GCACCACCTGCATCGAGAAGGATGGGCGGTGCAGGGTCGAATGATCCGGT
GTAAATGGACTCACCACCGCCAAGAAAGGATTACTACTCAGTGCTCGGCG
TTCCTCGTGACTCGAGCGATGAAGCAATAAAAGCTCGATACAGGCAGCTT
GCGATGGATTTGCATCCAGATCGGTGTGCAGCAGGCGATTCAAGCTCTGT
AGAGCGTTTTAAAGCAGTTTCAGAGGCCTACAAAGTGCTTTCAGATAGTG
GTCAGCGACGTATCCTGGACGAGTACTTGGAAGGTAGGAGGTTTGCTGGT
GCTCGTCTTCGGGGAGATGAGGGATTTTTGGACCGCTTGGCTGGGATTCG
AAGACCACGACCACCCCCAGGGTCACGTAAGGGTGGATTTTCCTCCTCCC
GGGCCTTCCATCTCGTTGAAATCGCACTTTCTCCCCGTGTGCTGGTCATG
GGGATTGGGTTGGCATTTATGACCTACATTGCTTTGGGACCCCGCGAAGA
CCGTGGGCATTCAAACGATTTGCTGGTACCGGCGTGGTACAATCAAAGAA
CAAAGCGGTGGGAGACTCCTGCCCCGTGGAATCCTGACTACAGGGCAGCC
GGCAGCGAACATCATGCCAAGGTTTCTAAGTATCATGTTTTTGAGTCAGC
ACCACCTGCATCGAGAAGGATGGGCGGTGCAGGGTCGAATGATCCGGTGT
AAATGGACTCACCACCGCCAAGAAAGGATTACTACTCAGTGCTCGGCGTT
CCTCGTGACTCGAGCGATGAAGCAATAAAAGCTCGATACAGGCAGCTTGC
GATGGATTTGCATCCAGATCGGTGTGCAGCAGGCGATTCAAGCTCTGTAG
AGCGTTTTAAAGCAGTTTCAGAGGCCTACAAAGTGCTTTCAGATAGTGGT
CAGCGACGTATCCTGGACGAGTACTTGGAAGGTAGGAGGTTTGCTGGTGC
TCGTCTTCGGGGAGATGAGGGATTTTTGGACCGCTTGGCTGGGATTCGAA
GACCACGACCACCCCCAGGGTCACGTAAGGGTGGATTTTCCTCCTCCCGG
GCCTTCCATCTCGTTGAAATCGCACTTTCTCCCCGTGTGCTGGTCATGGG
GATTGGGTTGGCATTTATGACCTACATTGCTTTGGGACCCCGCGAAGACC
GTGGGCATTCAAACGATTTGCTGGTACCGGCGTGGTACAATCAAAG
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Synonyms
Publications