EWM30411.1, cds275 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30411.1 vs. NCBI_GenBank
Match: gi|585113071|gb|EWM30411.1| (chaperone protein [Nannochloropsis gaditana]) HSP 1 Score: 435.261 bits (1118), Expect = 2.712e-154 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query: 1 MDSPPPRKDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGFLDRLAGIRRPRPPPGSRKGGFSSSRAFHLVEIALSPRVLVMGIGLAFMTYIALGPREDRGHSNDLLVPAWYNQRTKRWETPAPWNPDYRAAGSEHHAKVSKYHVFESAPPASRRMGGAGSNDPV 215
MDSPPPRKDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGFLDRLAGIRRPRPPPGSRKGGFSSSRAFHLVEIALSPRVLVMGIGLAFMTYIALGPREDRGHSNDLLVPAWYNQRTKRWETPAPWNPDYRAAGSEHHAKVSKYHVFESAPPASRRMGGAGSNDPV
Sbjct: 1 MDSPPPRKDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGFLDRLAGIRRPRPPPGSRKGGFSSSRAFHLVEIALSPRVLVMGIGLAFMTYIALGPREDRGHSNDLLVPAWYNQRTKRWETPAPWNPDYRAAGSEHHAKVSKYHVFESAPPASRRMGGAGSNDPV 215
BLAST of EWM30411.1 vs. NCBI_GenBank
Match: gi|979964544|emb|CUS90437.1| (DnaJ domain-containing protein, partial [Candidatus Kryptonium thompsoni]) HSP 1 Score: 77.411 bits (189), Expect = 1.655e-14 Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 0
Query: 6 PRKDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEY 74
P+KDYY +LGVPR+++ E IK YR+LAM+ HPDR G+ + E+FK ++EAY++LSD +R+ D Y
Sbjct: 2 PKKDYYEILGVPRNATTEEIKKAYRKLAMEYHPDR-NHGNKEAEEKFKEITEAYQILSDPEKRKRYDMY 69
BLAST of EWM30411.1 vs. NCBI_GenBank
Match: gi|1162406032|gb|OPX20734.1| (molecular chaperone DnaJ [Desulfobacca sp. 4484_104]) HSP 1 Score: 80.4925 bits (197), Expect = 3.588e-14 Identity = 45/86 (52.33%), Postives = 54/86 (62.79%), Query Frame = 0
Query: 8 KDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGFLD 93
KDYY +LGVPRD+ E IK +YRQLA+ HPDR GD + ERFK SEAY+VL D +RR+ D+Y G R G GF D
Sbjct: 6 KDYYQILGVPRDAKAEDIKKKYRQLALKYHPDR-NPGDKEAEERFKEASEAYEVLRDPQKRRLYDQY----GHEGLRDTGFTGFRD 86
BLAST of EWM30411.1 vs. NCBI_GenBank
Match: gi|1057116243|ref|WP_068511995.1| (molecular chaperone DnaJ [Caldimicrobium thiodismutans] >gi|972621913|dbj|BAU22583.1| molecular chaperone DnaJ [Caldimicrobium thiodismutans]) HSP 1 Score: 79.7221 bits (195), Expect = 6.200e-14 Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 0
Query: 8 KDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGFLD 93
KDYY++LGVPR+++ + IK YR+LAM HPDR GD S+ E+FK +SEAY+VLSD +R I D+ EG + G + G GF D
Sbjct: 4 KDYYAILGVPRNATQDEIKRAYRRLAMQFHPDR-NQGDKSAEEKFKDISEAYEVLSDPAKRAIYDQ--EG--YVGLKSSGYRGFED 84
BLAST of EWM30411.1 vs. NCBI_GenBank
Match: gi|56519178|emb|CAH81492.1| (heat shock protein DNAJ homologue Pfj4, putative, partial [Plasmodium chabaudi chabaudi]) HSP 1 Score: 74.7146 bits (182), Expect = 8.544e-14 Identity = 37/70 (52.86%), Postives = 45/70 (64.29%), Query Frame = 0
Query: 5 PPRKDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEY 74
P R DYY VLGVP+D+ IK YR LAM HPD+ + + ERFK +SEAY+VLSD +RR D Y
Sbjct: 2 PNRVDYYEVLGVPQDADISVIKKSYRTLAMKWHPDKNPNNKAEATERFKQISEAYEVLSDPKRRRKYDLY 71
BLAST of EWM30411.1 vs. NCBI_GenBank
Match: gi|1088858328|emb|SDY33152.1| (molecular chaperone DnaJ [Nitrosomonas halophila]) HSP 1 Score: 78.5666 bits (192), Expect = 1.287e-13 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 0
Query: 7 RKDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGFLDRLAGI 98
++DYY VLGV RD+ + +K YR+LAM HPDR AG++ + +RFK + EAY+VLSD+ +R D++ AGA G +GF D + I
Sbjct: 3 QRDYYEVLGVGRDADESELKKAYRKLAMKYHPDR-NAGNAQAEDRFKEIKEAYEVLSDASKRAAYDQFGHAGLNAGASGMGAQGFSDAFSDI 93
BLAST of EWM30411.1 vs. NCBI_GenBank
Match: gi|652765684|ref|WP_027080020.1| (molecular chaperone DnaJ [Luteimonas mephitis]) HSP 1 Score: 78.5666 bits (192), Expect = 1.333e-13 Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 0
Query: 7 RKDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEY 74
++DYY +LGV RD+ D+ +K YR+ AM HPDR GD+S++E FK EAY+VLSDSG+RR+ D++
Sbjct: 3 KRDYYEILGVARDAGDDELKKAYRRCAMKYHPDR-NPGDASAIESFKECKEAYEVLSDSGKRRMYDQH 69
BLAST of EWM30411.1 vs. NCBI_GenBank
Match: gi|503674780|ref|WP_013908856.1| (molecular chaperone DnaJ [Thermodesulfobacterium geofontis] >gi|334901350|gb|AEH22156.1| Chaperone protein dnaJ [Thermodesulfobacterium geofontis OPF15]) HSP 1 Score: 78.5666 bits (192), Expect = 1.654e-13 Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 0
Query: 8 KDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGFLD 93
KDYY++LGVPRD++ E IK YR+LA+ HPDR G+ + E+FK +SEAY+VLSD +R I D Y ++G R G GF D
Sbjct: 4 KDYYAILGVPRDATQEEIKRAYRRLALKYHPDR-NPGNKEAEEKFKEISEAYEVLSDPEKRAIYDAY----GYSGLRSTGYRGFED 84
BLAST of EWM30411.1 vs. NCBI_GenBank
Match: gi|1082136100|gb|OFV92195.1| (molecular chaperone DnaJ [Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15] >gi|1082200366|gb|OFW33140.1| molecular chaperone DnaJ [Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11]) HSP 1 Score: 78.5666 bits (192), Expect = 1.746e-13 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 0
Query: 7 RKDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGF 91
++DYY VLGVPR +SD IK+ YR+LAM HPDR AGD ++ E+FK +EAY VLSD+ +R + D + G GA G GF
Sbjct: 3 KRDYYEVLGVPRSASDGDIKSAYRKLAMKYHPDR-NAGDKAAEEKFKEAAEAYAVLSDTEKRGVYDRF--GHSGVGATAGGPAGF 84
BLAST of EWM30411.1 vs. NCBI_GenBank
Match: gi|1183362509|gb|ORX89486.1| (DnaJ-domain-containing protein [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 77.7962 bits (190), Expect = 2.131e-13 Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 10 YYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLE 76
YY +LGVP+D+ ++AIK YR+LA+ HPDR A ++ ++FK +SEAY+VLSD +R I D+Y E
Sbjct: 5 YYDILGVPKDADEDAIKKAYRKLALKWHPDRNANNKETAEKKFKEISEAYEVLSDKNKRAIYDQYGE 71 The following BLAST results are available for this feature:
BLAST of EWM30411.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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