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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF1499 |
| Orig transcript id | gnl|cribi|Naga_100008g126.7865.mrna |
| Orig protein id | gnl|cribi|Naga_100008g126.7865 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1112349..1113770 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2748 ID=rna2748|Name=rna2748|organism=Nannochloropsis gaditana|type=mRNA|length=1243bp
ACCCGAAAGCCTCTTACAGTCGAGTGTTGCTCACCTTTTTCATCCTTTTG
CACCTTGCAGGAGCTGCAGGGTGGTAAGGAACGGATTGCAAAGATTGGAA
CGGTCTCTACGGATGAGGCGTTTGCTGTGTGCCGGGGGAAGCGTGGCCGG
GAGAAGAACTAGCGGTGCTGGAAATGCGTCCTTGACTCTGTTCGGTAAAC
CGACATCTTTACCACTCACGCAAGCGACACCATCAGCATCCCTTTCAACC
GCCACACGGTTGATGGATCGGATAAATTTTGAGCCTCAGAAATCCGGATT
GGACAGTAAAGCACGTCGGGATAAAAGCACTCCACCACCGACCCGCCGGT
CAGGCGCCATCGCATTGAAAGTCGGAATGCTCGGCGTCTATGACCAATGG
GGCCGACGGTACGCATGTACAGTTCTTCAGCTTGACGCCGTTCAGGTAGT
GCAAGTGAAAAAGGAGGCGACGGATGGATACACTTCGGTGCAACTCGGGG
CGGGAGAAAAGAAGCTGAAGAACGCCTCTCGACCTGAACGAGGCCATTTG
GACCGTTGGATTGATGGACACGGCACCGCAGCACCCAAACGAAAACTCTG
GGAATTTAGAGTGACGCCAGATGCGCTCATGGCCCCAGGCACCCCGGTGT
TAGCCCAGCATTTCGTGCCTGGCCAGCTGGTGGATGTGGTCGGGACAAGC
AAAGGCAAGGGTTTCCAGGGCGTCATGAAACGATGGAATTTCAAAGGACA
AGGGGCATCCCACGGCGCGTCCCTTTCTCATCGATCCTTGGGCTCTACGG
GACAAAATACGTCCCCTGGCCGTGTCTTCAAGGGGAAAAAGATGCCGGGT
CGTCTTGGAGGAGAGAGGGTGACTGTGCAAAACCTCTGGCTGTATAAAAT
TGACACGGAGAGAAACCTCCTGTACGTGAAAGGGCACGTGCCAGGACCGA
AGGGAACCTACGTGCGAGTCAGCGATGCCATCAAAGGCGCCCATTTTCCT
GTGCCGCCCCCCGTACCCACGTTTGTGCCCGAGGCAGGCATCGCCTACCC
GGGGGAAATCACGGCGCAACTTCCAGAAGCGGATCCTTTGATACCGCCAG
AGGGGAGGGACGATGAATAAAGAGCCAGAAAGCAAGTGAAATTCAAAAAG
GAGGACCGTGTCGCCCGGAAGAGAGACGAACATGGCGCGTAGATGATGGT
TGTTTTTTCTGCTTTCTATGCTTCTGTACATGCCACCCAGCCC back to topprotein sequence of rna2748 >rna2748-protein ID=rna2748-protein|Name=rna2748|organism=Nannochloropsis gaditana|type=polypeptide|length=262bp
MGGGRTFRLSLGGKIVVLSTLLGSTNAWRSPPRLHTPLAHFETLSTSSAI
DVHSFPSSVASRLGSAISGRFLESVLLLLPLTVLPPSACAFPGLEDCTSE
SNPSFTIVTCDRFGIDPVAGRPKRCLSAENCISSTSVNNPSKYMSPWVFN
GAGEDVPTAWLSLVRAVEAQEGLKVVEIDNGSKQYYLRAEAPSKVPPGGV
DDLEFLLSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRLETIQKAV
GWSTVEEFYDYK back to topmRNA from alignment at CM002459.1:1112349..1113770- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2748 ID=rna2748|Name=rna2748|organism=Nannochloropsis gaditana|type=mRNA|length=1422bp|location=Sequence derived from alignment at CM002459.1:1112349..1113770- (Nannochloropsis gaditana)
GCCCGCAAAAGACGGGGCACAATTGAAAAACCATACAGGGACGGGTGGTG
GGGCGGGCATACTGCATTAATTTTATACCCGGGCGACGTTGTGGTGAGTA
CCATGGAGAGGATCCTTTCTTCTCGCTGTTCGAAGGGGAGGAGACAAGAG
CAGGAACGCCTCGCTTCCTCGCCCTTTGCCCTTTGCCCTTTGCGGCACAC
ACCTACGAAAGAGGGTGTAAGGCCAGACTGAGATTGTATGGTTACAATAT
TGACCACAAATAAGCTGGGAATGCTGTTCATACGAAAAAGTAAGGTTGGT
ATTTGATACATGAGAAATGGAATAATTAACCATCTATAATACGAAATACG
GATCAAGTGCTTTTTGTACTCTTCGTGCCGCATCAAGTTCGCAAGGGTTT
GCAGTATGAGCATCATTCAAGAATCTCCTTTTTCAAACCTCGCCATTACA
GAAATCTCATGGGCGGCGGTCGAACTTTTCGTTTATCCCTTGGCGGTAAA
ATTGTCGTTCTCTCTACTCTTCTCGGGTCTACAAATGCCTGGCGCTCGCC
ACCTCGACTTCACACACCCCTAGCACACTTTGAGACTCTTTCAACGTCGT
CAGCCATTGATGTTCATTCATTTCCCTCCTCGGTTGCCAGCCGGCTTGGA
TCAGCCATCTCTGGTCGCTTTCTCGAAAGCGTCCTTCTCCTCCTCCCTCT
GACGGTCCTTCCTCCGTCTGCCTGTGCCTTCCCGGGCCTGGAGGATTGCA
CCAGTGAATCCAATCCCTCTTTCACCATTGTGACCTGCGATCGTTTTGGC
ATAGATCCTGTCGCGGGACGGCCGAAGCGCTGTTTGTCTGCTGAAAACTG
CATCAGTTCCACGAGTGTGAATAATCCCAGCAAATACATGTCCCCTTGGG
TCTTCAATGGGGCTGGTGAAGACGTGCCTACCGCATGGTTGTCCCTCGTC
CGTGCAGTGGAAGCCCAGGAAGGATTGAAGGTTGTGGAAATCGACAACGG
AAGCAAGCAATACTATCTCCGGGCGGAAGCGCCGAGCAAAGTACCCCCCG
GCGGAGTGGACGACTTGGAATTCCTCTTATCGCCGAAAGATGGCTTGGTG
TTCTTCCGCTCCGCCTCACGACAAATGGCCTTCCTCTACCCGTTGACCCA
GCCCGTGGGCGATGGAGGGAGCATCAAGAAGAGGCTGGAAACGATCCAGA
AGGCCGTGGGCTGGTCGACTGTTGAGGAGTTTTACGACTACAAGTAATTC
TTGCGGCAAGGCAAGCGCCTGGTTAGCGGTTGGTTAGCGGTGGTGATCAC
TTGTATATGTACTGAATAAATTTTTATGCCGGCAAGGCATCGATTCTTGG
AAAAAAAGGCTGGGCTGGGTGGCATGTACAGAAGCATAGAAAGCAGAAAA
AACAACCATCATCTACGCGCCA back to topCoding sequence (CDS) from alignment at CM002459.1:1112349..1113770- >rna2748 ID=rna2748|Name=rna2748|organism=Nannochloropsis gaditana|type=CDS|length=789bp|location=Sequence derived from alignment at CM002459.1:1112349..1113770- (Nannochloropsis gaditana)
ATGGGCGGCGGTCGAACTTTTCGTTTATCCCTTGGCGGTAAAATTGTCGT
TCTCTCTACTCTTCTCGGGTCTACAAATGCCTGGCGCTCGCCACCTCGAC
TTCACACACCCCTAGCACACTTTGAGACTCTTTCAACGTCGTCAGCCATT
GATGTTCATTCATTTCCCTCCTCGGTTGCCAGCCGGCTTGGATCAGCCAT
CTCTGGTCGCTTTCTCGAAAGCGTCCTTCTCCTCCTCCCTCTGACGGTCC
TTCCTCCGTCTGCCTGTGCCTTCCCGGGCCTGGAGGATTGCACCAGTGAA
TCCAATCCCTCTTTCACCATTGTGACCTGCGATCGTTTTGGCATAGATCC
TGTCGCGGGACGGCCGAAGCGCTGTTTGTCTGCTGAAAACTGCATCAGTT
CCACGAGTGTGAATAATCCCAGCAAATACATGTCCCCTTGGGTCTTCAAT
GGGGCTGGTGAAGACGTGCCTACCGCATGGTTGTCCCTCGTCCGTGCAGT
GGAAGCCCAGGAAGGATTGAAGGTTGTGGAAATCGACAACGGAAGCAAGC
AATACTATCTCCGGGCGGAAGCGCCGAGCAAAGTACCCCCCGGCGGAGTG
GACGACTTGGAATTCCTCTTATCGCCGAAAGATGGCTTGGTGTTCTTCCG
CTCCGCCTCACGACAAATGGCCTTCCTCTACCCGTTGACCCAGCCCGTGG
GCGATGGAGGGAGCATCAAGAAGAGGCTGGAAACGATCCAGAAGGCCGTG
GGCTGGTCGACTGTTGAGGAGTTTTACGACTACAAGTAA back to top
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