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Properties
| Property Name | Value |
| Product | rieske (2fe-2s) domain protein |
| Orig transcript id | gnl|cribi|Naga_100008g117.7922.mrna |
| Orig protein id | gnl|cribi|Naga_100008g117.7922 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002459.1 | supercontig | CM002459.1:1096426..1099332 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2741 ID=rna2741|Name=rna2741|organism=Nannochloropsis gaditana|type=mRNA|length=3504bp CACAAGGCTTTTGACGGGCTCTTACCCCTGTGATATTATGTTTTTAGTTT TTCCAATGGGCCGGCTGCCACGCGTCACGGAGTACCATCTTCCTCTGTGT CGCCGTGTCGTCTTCAATATCTAGAAAAATACGACCACATGCCACATTCA TGAAAATCAACGATGATAATTTCTTTACTCTTAATAAAATGTTAAATATG TGCAATTCATGTTGCGCGTCGTATCGTAATTGCGGCGGGTTTTCCCAAAG ATCTGCTCCTGACCCTTAACCCCCACCTTCCTGCGTGTTTCGACCCCCTT CCTCGCGATTTGCTTGCTGGATTTCACAGGAAGGCAGACACTTTCAAAAA CGCCTCTCATCCATTTCCTCCTACTCCTAACAAGCTAACTATTTTTTGAT GGAGAAATTAACATTTTTTGTTTTTCGAACGTACCAAACAGGAGGATAGG AGGGACAGCTTGCTCGCTTTGAGGGGCTTCCGAGGCCATGGGTGGCGGCG GACAGACTGTAGTACCGCAAAGCATCGATAGTGATACAGCTGAGGTAATA GTCCTAGAAAATTCTCTTATTTGGTCGCTTGAGGCGTTGTTTAGCGACCG ACTTGTTGGGTAACGTAGGTGACTCGTGTAATCTGCCCCATTTTATGGTG ACAACCATACCGGCAATACGTCGGCAATCTTTCATTCACAGTCTCTTGAA TTAAAAAAATACAATTGTCTTTCACTCATTCTCAAAGGATGCATCCTCAA CGAGTGTAAGGGTCGATGGTCCGCTCGCAGCCGGGAGACGGGAGGATCCG CTGTCCTTTTCCGACGAGGGGTCACCACTCGCATCCATCCCGCACGCACA GCACCCGCTGGACGGCATTATAAACTCAGAATCCTCCACTTCGGCTGTCA ATCCTCTTCCCTTCACACTGCCTCGCAATATTTACGAGAAGCAGGACGTT GTCCCCTTCTATGACGCCCCACTGATTGTGGCAGTCGTCGCCAATGTGGT GTGGCCAGCGGTGCTTCTCGTTTTGACTGTTTGGAGCATGCTGGTGGTGA TATATTTCCGCCTGGCTCGTTTTCTCTCCGAAAACGTCCTCCAAACTCCA GCAGTGCACGTGCACGACGGAGACGAGGCTCCTGTGGACATGGGTCTCTA TTTCTTCGGCCTTGATAACCAGTGTGAGAAATGGTTGCCTTCCTCTTCCT CCTCCGCGGCAGAGGATCTTGCTCCCACTTTCCGCATGTCCCTCCTACGC GGGAGCAAGGGGAAAAAGAGCACGATTGATGCGAATCCCAAGGGTCAGTG CAAGTTTTTTGACCCCTGCAAACCCACTGTCATCTATGTCCACGGGTTTT CTCGCCGGACCACGGCCCGACGTTTTCGAGAGACCTTCAACTGGGCACAC AGCGATAAGCTGTACGGTCTGGATATTAATGCCGCCGATCGATGGGTACG GGAAGGCTGGAATATCGGAATTTTCTTCTGGAACAATCATGCCGACGAGG AGGTTCCACAGGACACAGAGAGCAAAATATGGACCTCGAACGGCCGGTGC GGAATGCGCTATCGGACGATCTGTCCTCAGAGGGGTCGCGTCATGTACTA CGCCTCCTCCCGCCCTTCCCCCTCCATTTCCCAAACCCTCGCGGACCTGT TGGCGGACGTGTTTAGGGGGGCTCAGGCTCCCTACAGGCTTGTGGGGCAT AGTTTGGGTACACAGGTGGTCGTGCATGCCGCCACCCTGCTTAGCCAGCG GAAAGCGCGAGAGGAAGAAGAAGTCAGGTCGGCGACTGCTTTAGCCGCTG CAGCCGCTTCGGCGGCCGTGGCAGTTGCCAGGACGGGGGCAGCGGCCACG ATGAAGGCAAAAATGGGGGTATATGCAAGCAAGAAAGAGAAACGAAAGAC CGTAGCGGCAGCTAAACGTGCCGAAGCTGCGGCAATCTCAACGGCCGCAC AAGCAGCCGCTTGTGCGGCAGCGAAAGCAGCAGCAGCTACACAGGCCCCT TTGCAGCTACCGACACGCATCGCCCTGTTGGACGCGTTTGCCACGCTCGG CGTGAAGGCCTACCTGTCGGGATGGCCGATCATGGTGGTGGTGCAGAAGG AGGTGCTTGCCCTCCGAGGGCTTGGGATTGTGTTTGAACAGTTCCAGACC AGCTTGATCGGCCGCCGGGGATTCTTTCTGCGCCATTTGACCGCCTTCGT TCAGTTGGATCCCCCCGGCATTCCCTGGTACCGGCTGCGATCACGGCACG TGGCAGCAGTCTACATGTACTTCCTCTCCTTTGGTCATGCCGTGGACGGG CCCCGACTGAAAAAGGCCGACCTTCGCCGGCATCAGTCCGTGGAGATCTG CTTCAGCCTCCTCAATAGTGCGGGTGGCAGCTTGGGAAGCGGGCTGAACG GCCTCAAGAGCCATCTCCTCCCGGAGACGGAGGAAGAACAAAACGCCGAC CCCAGCGCTTGGGCCATGGGGGCTACGTCGTGTGTCGCCCTCTCGACCCT TATCTCGGGCGCGTCGCCGTCTTCCCGTTCTCCGCCTTTGCGGACCTCCG TGTCCCTGTCTATTTTCCAACGTCGACACAGTGCAGGGACCTTGTCAAAT CAGGAAAATCCGAACGAGAGCCTTCGATGCTTTCCGACCGACGATGGTGC CACTTCCCCCCCTTCGATGACGTCTCCCACGGACGTGGCCACAGCGATTT TCCGGCGTCGTGTGCCCGCGTATAAGACGCTGGCCCTTGGGAACAAGAGC CTCAATTCCCTGCAAGAAGCCATGCCGCTTCTGCCACCTTTGTCGTCCAC CATTCAAACCCCCCTCGCTCTTCCTCTCGCACCCGCTTCCAAGGTGACCG TGACGTCACAATCGCAGGACGGAGCCCAGGTGCTGGGCAGGCAACAGCGG CATGAGTATTATTCGCACGGCGCCTACGAAGGGCACAACAAGAACCATTT GCGGTGGCTGACGGCCTCGGCGTATCGAGAGGTGGAGATTGGCGACTTTC CCCTCATGGCACGGGCAACGGATGCTGAGGTGCGTGAGCTGATGCTGGGA AACTATGTGTACAAGCAGTATCGGGGCCATTTGTTCTTGCGAGTTTCGCG GGCTTGGTAGCATGGTTTTTAGACATAGATTACATAGGTCAGCGGTAACT GAACGGTTATGAGAACCATCTTTAAAATTTGATTGCAAAGCATATAATGC GATAACACCAGGAAGTAAAGGCGGAGAAAGACTTGTCGGGGAGTCATGTA AATGTACGCGTAGGTAATCAGCTAGAAATAAGACTTGAAAACATGCCCTT GGTGTATTGCTCTTTGAAAGGACATGCGTGCCATCTAGGAACCCGACATG GATAACTTTGTTCAGAGTTATGATAGATAAAGTGGCACTTGTATAATAAA TACACATAGAGAAAACTGTGCTTGCAATTATTTGTGTTCCTCCAAAATTT ATTCTTTGAATCTTGAAGTGTTATGCCACTCTGTTTTTGCAAACTGTGCA TACC back to topprotein sequence of rna2741 >rna2741-protein ID=rna2741-protein|Name=rna2741|organism=Nannochloropsis gaditana|type=polypeptide|length=968bp MSPVQDPFLIPPHLCRTAGTKRRMSGASSSCTFLAVVAATAAAASTFRGS SSLYSPIMVDAFAPPTQFSWAPHKSSTAQRTAHCQRVPYFLPTTCLEKGG ARMRHARDRSSLPVHAISPFQEQYRDDEGLPEKKKSSKGKDKDQVEGTQA PSSSTPSLHDEILTKFKSLFEGIASIDTHAESTHEEAVATLAATALAKTK GGAGGRGGSSLVTLGSPSTTTVSFPDQSRAADVAAAALQSPCDSALPAVV PKSSSSSPSPSTSLSASDVALGKVPEPVNENIARISSKVPNTWLAVCHSS SLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDL VVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYL FPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDM LHISYVHSFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSI SKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTIYVVAVPVEDGLTVVH YKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEHQA GYVLSRYDKPLKIYRKALKEFMEASKSREFLAERRALEMELLRLIECTER GRKATRGQHSMILSIVQGLERGFARQFKDEEGGNGEVVIEDSAVNGTWHL VYANPGDLASLPPDDEQKEEEQRSLRMQDLRPALDATATAAAGPYPWRTM TPRQQQRMTREARERMQQAEEKGGSAHSLPAAEPASKPLPRSPRETDDVL LYSEEKSARLQERLRSAGGERYLLDFTPSKGRPLWVDTDESTQTIDTSKN LLSNTAVYQGLLGITTKVELNGIISTPAGGQKNKGDALGVKDGGRNKGHR QDVQFTSAKVDVGGFKVTFPHMDVFGVNGWLDTTFVDEHIRICRGNRGSI FVLTRRPLTVAAVGKGEV back to topmRNA from alignment at CM002459.1:1096426..1099332+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2741 ID=rna2741|Name=rna2741|organism=Nannochloropsis gaditana|type=mRNA|length=2907bp|location=Sequence derived from alignment at CM002459.1:1096426..1099332+ (Nannochloropsis gaditana) ATGTCCCCAGTGCAAGACCCGTTCCTAATACCTCCTCATCTATGCCGGAC
TGCTGGGACGAAACGCAGAATGTCCGGTGCAAGTTCATCTTGTACTTTCT
TGGCCGTTGTTGCTGCCactgctgcagctgccagTACCTTCcgtggctcc
tcctccctgtacAGTCCCATCATGGTGGATGCCTTTGCACCGCCTACTCA
GTTCTCATGGGCTCCCCACAAGTCTTCAACAGCGCAGAGGACGGCGCATT
GTCAACGCGTCCCGTACTTTCTACCTACCACCTGTCTCGAAAAAGGCGGG
GCAAGAATGAGACATGCCAGGGACAGATCTTCCTTGCCGGTCCACGCCAT
CAGCCCGTTCCAAGAGCAGTACCGCGATGACGAGGGACTgccggaaaaga
aaaagtcttcgaaggggaaggataAGGACCAGGTCGAAGGCACTCAGgct
ccgtcgtcctccacgccctccctccacgatGAGATCCTGACCAAGTTCAA
GTCCCTTTTCGAGGGAATAGCCTCCATCGACACCCACGCGGAATCGAcgc
acgaggaggcggttGCAACCCTTGCGGCCACTGCATTGGCGAAGAccaag
ggcggggccgggggacgagggggcaGCAGCTTGGTAACCCTTGGAAGTCC
TTCCACTACGACCGTGTCGTTTCCGGATCAATCCCGCGCCGCTGATGTCG
CGGCCGCCGCTTTGCAATCACCTTGCGACAGTGCCTTGCCTGCCGTCGTC
CCTaaatcttcctcctcctctccttccccctcgacgTCCCTGAGCGCCAG
CGACGTGGCCTTGGGCAAGGTACCAGAACCCGTGAACGAAAATATTGCGC
GAATCTCGAGCAAGGTGCCCAACACGTGGTTGGCCGTTTgtcattcctcc
tccctcaagaagaaggagctgAAAAAGATCTGGGTGGACGACAAGCCGAT
CTGCCTCTTTCGAGCCGCTTCGGGGGAGGTCAAGGCCATCAGCGACATTT
GTCTGCATCGGGCCGCTGCCCTGTCGGACGGCTGGTTGGACGGGGACCTG
GTCGTTTGCCCCTACCATGCCTACAAATTCGACGGGGAAGGCAAGCTCCG
CTATATCCcgggggtggacgagggTATGCTGGCCAAGAACAAGCGGACGG
CGCGCACGGTGTGGTACAAAACCTTGGAGCAGGGAGGCTTGATCTACCTC
TTCCCGGATGCCATGCGGGCCGGCGCGATTGAGCAGCACGTGAAGCCCTT
CCTGATaccggaggaggtggacccGTCCTTCCGAGTGGTGGAAGGCGTGG
CGGAGATCAAGGCGAGCGCGAATTTGGTGGTTGAGAATTTGTTGGACATG
CTCCACATATCGTACGTGCACTCCTTTGGGAACATGCAGGAACCGTTGCC
GTTCTCGGAGAATTACGACTATTTTTTCGACGACGAGGCCTCTCAGCTCC
TCCCGTACGCCAGGACCACCTTCAAATACCGGGCGGGACCTACTAGTATC
AGTAAAGTGGTGGGCCAAGTCaaagaggtggtggtggagaacgAGTTCCA
CTTGCCGTACACGACGGTGACCCGCGTCAAGTTTGGGAAGGATGTCAAGA
CGATCTATGTGGTGGCCGTCCCCGTGGAGGACGGGTTGACCGTGGTGCAT
TACAAGCTCTACCGTAATTTCATGTACGTGCACCCGCAGGACGAGAGTCC
CGTCAACAAGGGCCTGGACCATTTCTTCCAGTCGGTCATGCGTCTGACGT
tgaacgaggacaaggagataTTGGAGTCTCTGTATCAGGAACACCAGGCC
GGGTATGTCTTGAGTCGGTACGACAAGCCTCTGAAAATCTATCGCAAAGC
CTTGAAGGAATTCATGGAGGCTAGCAAGTCTCGTGAATTTTTGGCCGAAA
GGCGCGCGTTGGAAATGGAACTCTTGCGCTTGATTGAGTgcacggagagg
ggaagaaaagcgacCCGGGGCCAACACTCCATGATTCTGTCGATCGTCCA
AGGCTTGGAACGAGGCTTTGCCAGGCAGttcaaggacgaggaaggcggga
atggAGAGGTAGTAATAGAGGACAGCGCCGTCAATGGGACGTGGCATTTG
GTCTATGCTAATCCTGGTGATTTggcgtcccttcctcccgacgatgaaca
gaaggaggaagaacaacGGTCCCTCCGAATGCAAGACCTGCGCCCGGCAT
TGGACGCGACGGCCACAGCCGCGGCAGGGCCCTACCCATGGCGGACCATG
ACCCCAAGGCAGCAACAACGCATGACCCGTGAGGCGCGCGAGCGGATGCA
GCAAgcagaagagaaaggagggtcGGCCCATTCCCTTCCAGCTGCAGAAC
CGGCATCCAAGCCTCTTCCCCGTTCTCCTCGGGAGACGGACGATGTCTTG
CTGTATTCCGAAGAAAAATCGGCGCGTTTACAGGAGCGTCTGCGTTCCGC
CGGTGGAGAGAGATATCTGCTAGATTTTACACCGTCCAAAGGGCGGCCCT
TGTGGGTGGACACAGACGAATCTACTCAGACGATCGACACGTCGAAGAAC
CTTTTGTCGAACACGGCGGTCTACCAAGGGCTTCTGGGCATCACGACGAA
GGTGGAATTGAACGGGATCATCTCCACTCCCGCGGGAGGCCAGAAAAATA
AGGGCGATGCGCTGGGGgtgaaggatggaggaaggaacaagGGCCATCGC
CAAGATGTACAGTTCACCTCGGCAAAAGTGGACGTGGGGGGTTTCAAGGT
GACGTTCCCACACATGGATGTGTTTGGCGTGAATGGCTGGCTGGATACGA
CCTTTGTGGATGAGCACATTCGAATATGCCGGGGAAACAGAGGCTCGATA
TTTGTTCTTACCCGGCGCCCGCTGACTGTGGCAGCCGTAGGAAAGGGCGA
AGTGTGA back to topCoding sequence (CDS) from alignment at CM002459.1:1096426..1099332+ >rna2741 ID=rna2741|Name=rna2741|organism=Nannochloropsis gaditana|type=CDS|length=2907bp|location=Sequence derived from alignment at CM002459.1:1096426..1099332+ (Nannochloropsis gaditana) ATGTCCCCAGTGCAAGACCCGTTCCTAATACCTCCTCATCTATGCCGGAC TGCTGGGACGAAACGCAGAATGTCCGGTGCAAGTTCATCTTGTACTTTCT TGGCCGTTGTTGCTGCCactgctgcagctgccagTACCTTCcgtggctcc tcctccctgtacAGTCCCATCATGGTGGATGCCTTTGCACCGCCTACTCA GTTCTCATGGGCTCCCCACAAGTCTTCAACAGCGCAGAGGACGGCGCATT GTCAACGCGTCCCGTACTTTCTACCTACCACCTGTCTCGAAAAAGGCGGG GCAAGAATGAGACATGCCAGGGACAGATCTTCCTTGCCGGTCCACGCCAT CAGCCCGTTCCAAGAGCAGTACCGCGATGACGAGGGACTgccggaaaaga aaaagtcttcgaaggggaaggataAGGACCAGGTCGAAGGCACTCAGgct ccgtcgtcctccacgccctccctccacgatGAGATCCTGACCAAGTTCAA GTCCCTTTTCGAGGGAATAGCCTCCATCGACACCCACGCGGAATCGAcgc acgaggaggcggttGCAACCCTTGCGGCCACTGCATTGGCGAAGAccaag ggcggggccgggggacgagggggcaGCAGCTTGGTAACCCTTGGAAGTCC TTCCACTACGACCGTGTCGTTTCCGGATCAATCCCGCGCCGCTGATGTCG CGGCCGCCGCTTTGCAATCACCTTGCGACAGTGCCTTGCCTGCCGTCGTC CCTaaatcttcctcctcctctccttccccctcgacgTCCCTGAGCGCCAG CGACGTGGCCTTGGGCAAGGTACCAGAACCCGTGAACGAAAATATTGCGC GAATCTCGAGCAAGGTGCCCAACACGTGGTTGGCCGTTTgtcattcctcc tccctcaagaagaaggagctgAAAAAGATCTGGGTGGACGACAAGCCGAT CTGCCTCTTTCGAGCCGCTTCGGGGGAGGTCAAGGCCATCAGCGACATTT GTCTGCATCGGGCCGCTGCCCTGTCGGACGGCTGGTTGGACGGGGACCTG GTCGTTTGCCCCTACCATGCCTACAAATTCGACGGGGAAGGCAAGCTCCG CTATATCCcgggggtggacgagggTATGCTGGCCAAGAACAAGCGGACGG CGCGCACGGTGTGGTACAAAACCTTGGAGCAGGGAGGCTTGATCTACCTC TTCCCGGATGCCATGCGGGCCGGCGCGATTGAGCAGCACGTGAAGCCCTT CCTGATaccggaggaggtggacccGTCCTTCCGAGTGGTGGAAGGCGTGG CGGAGATCAAGGCGAGCGCGAATTTGGTGGTTGAGAATTTGTTGGACATG CTCCACATATCGTACGTGCACTCCTTTGGGAACATGCAGGAACCGTTGCC GTTCTCGGAGAATTACGACTATTTTTTCGACGACGAGGCCTCTCAGCTCC TCCCGTACGCCAGGACCACCTTCAAATACCGGGCGGGACCTACTAGTATC AGTAAAGTGGTGGGCCAAGTCaaagaggtggtggtggagaacgAGTTCCA CTTGCCGTACACGACGGTGACCCGCGTCAAGTTTGGGAAGGATGTCAAGA CGATCTATGTGGTGGCCGTCCCCGTGGAGGACGGGTTGACCGTGGTGCAT TACAAGCTCTACCGTAATTTCATGTACGTGCACCCGCAGGACGAGAGTCC CGTCAACAAGGGCCTGGACCATTTCTTCCAGTCGGTCATGCGTCTGACGT tgaacgaggacaaggagataTTGGAGTCTCTGTATCAGGAACACCAGGCC GGGTATGTCTTGAGTCGGTACGACAAGCCTCTGAAAATCTATCGCAAAGC CTTGAAGGAATTCATGGAGGCTAGCAAGTCTCGTGAATTTTTGGCCGAAA GGCGCGCGTTGGAAATGGAACTCTTGCGCTTGATTGAGTgcacggagagg ggaagaaaagcgacCCGGGGCCAACACTCCATGATTCTGTCGATCGTCCA AGGCTTGGAACGAGGCTTTGCCAGGCAGttcaaggacgaggaaggcggga atggAGAGGTAGTAATAGAGGACAGCGCCGTCAATGGGACGTGGCATTTG GTCTATGCTAATCCTGGTGATTTggcgtcccttcctcccgacgatgaaca gaaggaggaagaacaacGGTCCCTCCGAATGCAAGACCTGCGCCCGGCAT TGGACGCGACGGCCACAGCCGCGGCAGGGCCCTACCCATGGCGGACCATG ACCCCAAGGCAGCAACAACGCATGACCCGTGAGGCGCGCGAGCGGATGCA GCAAgcagaagagaaaggagggtcGGCCCATTCCCTTCCAGCTGCAGAAC CGGCATCCAAGCCTCTTCCCCGTTCTCCTCGGGAGACGGACGATGTCTTG CTGTATTCCGAAGAAAAATCGGCGCGTTTACAGGAGCGTCTGCGTTCCGC CGGTGGAGAGAGATATCTGCTAGATTTTACACCGTCCAAAGGGCGGCCCT TGTGGGTGGACACAGACGAATCTACTCAGACGATCGACACGTCGAAGAAC CTTTTGTCGAACACGGCGGTCTACCAAGGGCTTCTGGGCATCACGACGAA GGTGGAATTGAACGGGATCATCTCCACTCCCGCGGGAGGCCAGAAAAATA AGGGCGATGCGCTGGGGgtgaaggatggaggaaggaacaagGGCCATCGC CAAGATGTACAGTTCACCTCGGCAAAAGTGGACGTGGGGGGTTTCAAGGT GACGTTCCCACACATGGATGTGTTTGGCGTGAATGGCTGGCTGGATACGA CCTTTGTGGATGAGCACATTCGAATATGCCGGGGAAACAGAGGCTCGATA TTTGTTCTTACCCGGCGCCCGCTGACTGTGGCAGCCGTAGGAAAGGGCGA AGTGTGA back to top
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