EWM28030.1, cds2733 (CDS) Nannochloropsis gaditana

Overview
NameEWM28030.1
Unique Namecds2733
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1096426..1099332 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28030.1
Productrieske (2fe-2s) domain protein
Orig transcript idgnl|cribi|Naga_100008g117.7922.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1096426..1099332 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR017941Rieske_2Fe-2S
IPR006843PAP/fibrillin_dom
Homology
BLAST of EWM28030.1 vs. NCBI_GenBank
Match: gi|585110371|gb|EWM28030.1| (rieske (2fe-2s) domain protein [Nannochloropsis gaditana])

HSP 1 Score: 2006.49 bits (5197), Expect = 0.000e+0
Identity = 968/968 (100.00%), Postives = 968/968 (100.00%), Query Frame = 0
Query:    1 MSPVQDPFLIPPHLCRTAGTKRRMSGASSSCTFLAVVAATAAAASTFRGSSSLYSPIMVDAFAPPTQFSWAPHKSSTAQRTAHCQRVPYFLPTTCLEKGGARMRHARDRSSLPVHAISPFQEQYRDDEGLPEKKKSSKGKDKDQVEGTQAPSSSTPSLHDEILTKFKSLFEGIASIDTHAESTHEEAVATLAATALAKTKGGAGGRGGSSLVTLGSPSTTTVSFPDQSRAADVAAAALQSPCDSALPAVVPKSSSSSPSPSTSLSASDVALGKVPEPVNENIARISSKVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEHQAGYVLSRYDKPLKIYRKALKEFMEASKSREFLAERRALEMELLRLIECTERGRKATRGQHSMILSIVQGLERGFARQFKDEEGGNGEVVIEDSAVNGTWHLVYANPGDLASLPPDDEQKEEEQRSLRMQDLRPALDATATAAAGPYPWRTMTPRQQQRMTREARERMQQAEEKGGSAHSLPAAEPASKPLPRSPRETDDVLLYSEEKSARLQERLRSAGGERYLLDFTPSKGRPLWVDTDESTQTIDTSKNLLSNTAVYQGLLGITTKVELNGIISTPAGGQKNKGDALGVKDGGRNKGHRQDVQFTSAKVDVGGFKVTFPHMDVFGVNGWLDTTFVDEHIRICRGNRGSIFVLTRRPLTVAAVGKGEV 968
            MSPVQDPFLIPPHLCRTAGTKRRMSGASSSCTFLAVVAATAAAASTFRGSSSLYSPIMVDAFAPPTQFSWAPHKSSTAQRTAHCQRVPYFLPTTCLEKGGARMRHARDRSSLPVHAISPFQEQYRDDEGLPEKKKSSKGKDKDQVEGTQAPSSSTPSLHDEILTKFKSLFEGIASIDTHAESTHEEAVATLAATALAKTKGGAGGRGGSSLVTLGSPSTTTVSFPDQSRAADVAAAALQSPCDSALPAVVPKSSSSSPSPSTSLSASDVALGKVPEPVNENIARISSKVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEHQAGYVLSRYDKPLKIYRKALKEFMEASKSREFLAERRALEMELLRLIECTERGRKATRGQHSMILSIVQGLERGFARQFKDEEGGNGEVVIEDSAVNGTWHLVYANPGDLASLPPDDEQKEEEQRSLRMQDLRPALDATATAAAGPYPWRTMTPRQQQRMTREARERMQQAEEKGGSAHSLPAAEPASKPLPRSPRETDDVLLYSEEKSARLQERLRSAGGERYLLDFTPSKGRPLWVDTDESTQTIDTSKNLLSNTAVYQGLLGITTKVELNGIISTPAGGQKNKGDALGVKDGGRNKGHRQDVQFTSAKVDVGGFKVTFPHMDVFGVNGWLDTTFVDEHIRICRGNRGSIFVLTRRPLTVAAVGKGEV
Sbjct:    1 MSPVQDPFLIPPHLCRTAGTKRRMSGASSSCTFLAVVAATAAAASTFRGSSSLYSPIMVDAFAPPTQFSWAPHKSSTAQRTAHCQRVPYFLPTTCLEKGGARMRHARDRSSLPVHAISPFQEQYRDDEGLPEKKKSSKGKDKDQVEGTQAPSSSTPSLHDEILTKFKSLFEGIASIDTHAESTHEEAVATLAATALAKTKGGAGGRGGSSLVTLGSPSTTTVSFPDQSRAADVAAAALQSPCDSALPAVVPKSSSSSPSPSTSLSASDVALGKVPEPVNENIARISSKVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEHQAGYVLSRYDKPLKIYRKALKEFMEASKSREFLAERRALEMELLRLIECTERGRKATRGQHSMILSIVQGLERGFARQFKDEEGGNGEVVIEDSAVNGTWHLVYANPGDLASLPPDDEQKEEEQRSLRMQDLRPALDATATAAAGPYPWRTMTPRQQQRMTREARERMQQAEEKGGSAHSLPAAEPASKPLPRSPRETDDVLLYSEEKSARLQERLRSAGGERYLLDFTPSKGRPLWVDTDESTQTIDTSKNLLSNTAVYQGLLGITTKVELNGIISTPAGGQKNKGDALGVKDGGRNKGHRQDVQFTSAKVDVGGFKVTFPHMDVFGVNGWLDTTFVDEHIRICRGNRGSIFVLTRRPLTVAAVGKGEV 968          
BLAST of EWM28030.1 vs. NCBI_GenBank
Match: gi|553193141|ref|XP_005855718.1| (rieske (2fe-2s) domain protein [Nannochloropsis gaditana CCMP526] >gi|422293340|gb|EKU20640.1| rieske (2fe-2s) domain protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1929.45 bits (4997), Expect = 0.000e+0
Identity = 931/945 (98.52%), Postives = 937/945 (99.15%), Query Frame = 0
Query:   24 MSGASSSCTFLAVVAATAAAASTFRGSSSLYSPIMVDAFAPPTQFSWAPHKSSTAQRTAHCQRVPYFLPTTCLEKGGARMRHARDRSSLPVHAISPFQEQYRDDEGLPEKKKSSKGKDKDQVEGTQAPSSSTPSLHDEILTKFKSLFEGIASIDTHAESTHEEAVATLAATALAKTKGGAGGRGGSSLVTLGSPSTTTVSFPDQSRAADVAAAALQSPCDSALPAVVPKSSSSSPSPSTSLSASDVALGKVPEPVNENIARISSKVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEHQAGYVLSRYDKPLKIYRKALKEFMEASKSREFLAERRALEMELLRLIECTERGRKATRGQHSMILSIVQGLERGFARQFKDEEGGNGEVVIEDSAVNGTWHLVYANPGDLASLPPDDEQKEEEQRSLRMQDLRPALDATATAAAGPYPWRTMTPRQQQRMTREARERMQQAEEKGGSAHSLPAAEPASKPLPRSPRETDDVLLYSEEKSARLQERLRSAGGERYLLDFTPSKGRPLWVDTDESTQTIDTSKNLLSNTAVYQGLLGITTKVELNGIISTPAGGQKNKGDALGVKDGGRNKGHRQDVQFTSAKVDVGGFKVTFPHMDVFGVNGWLDTTFVDEHIRICRGNRGSIFVLTRRPLTVAAVGKGEV 968
            MSGA S  T LAVVAATAAAASTFRGSSSLYSPIMVDAFAPPTQFSWAPHKSSTAQRTAHCQRVPYFLPTTCLEKGGARMRHARDRSS PVHAISPFQEQYRDD+GLPEKKKSSKGKDKD+V GTQAPSSSTPSLHDEILTKFKSLFEGIASIDTHA+STHEEA+ATLAATALAKTKGGAGGRGGSSLVTLGSPSTTTVSFPDQSRAADVAA ALQSPCDSALPA VPKSSSSSPSPSTSLSASDVALGKVPEPVNENIARISSKVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEHQAGYVLSRYDKPLKIYRKALKEFMEASKSREFLAERRALEMELLRLIECTERGRKATRGQHSMILSIVQGLERGFARQFKDEEGGNGEVVIEDSAVNGTWHLVYANPGDLASLPPDDEQKEEEQRSLRMQDLRPALDATATAAAGPYPWRTMTPRQQQRMTREARERMQQAEEKGGSAHSLPAAEPASKPLPRSPRETDDVLLYSEEKSARLQERLRSAGGERYLLDFTPSKGRPLWVDT+ESTQTIDTSKNLLSNTAVYQGLLGITTKVELNGIISTPAGGQKNKGDALGV+DGGRNKGHRQDVQFTSAKVDVGGFKVTFPHMDVFGVNGWLDTTFVDEHIRICRGNRGSIFVLTRRPLTVAAVGKGEV
Sbjct:    1 MSGACSPYTLLAVVAATAAAASTFRGSSSLYSPIMVDAFAPPTQFSWAPHKSSTAQRTAHCQRVPYFLPTTCLEKGGARMRHARDRSSSPVHAISPFQEQYRDDDGLPEKKKSSKGKDKDKVAGTQAPSSSTPSLHDEILTKFKSLFEGIASIDTHADSTHEEAIATLAATALAKTKGGAGGRGGSSLVTLGSPSTTTVSFPDQSRAADVAATALQSPCDSALPAAVPKSSSSSPSPSTSLSASDVALGKVPEPVNENIARISSKVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEHQAGYVLSRYDKPLKIYRKALKEFMEASKSREFLAERRALEMELLRLIECTERGRKATRGQHSMILSIVQGLERGFARQFKDEEGGNGEVVIEDSAVNGTWHLVYANPGDLASLPPDDEQKEEEQRSLRMQDLRPALDATATAAAGPYPWRTMTPRQQQRMTREARERMQQAEEKGGSAHSLPAAEPASKPLPRSPRETDDVLLYSEEKSARLQERLRSAGGERYLLDFTPSKGRPLWVDTEESTQTIDTSKNLLSNTAVYQGLLGITTKVELNGIISTPAGGQKNKGDALGVEDGGRNKGHRQDVQFTSAKVDVGGFKVTFPHMDVFGVNGWLDTTFVDEHIRICRGNRGSIFVLTRRPLTVAAVGKGEV 945          
BLAST of EWM28030.1 vs. NCBI_GenBank
Match: gi|1004142779|gb|KXZ50765.1| (hypothetical protein GPECTOR_15g450 [Gonium pectorale])

HSP 1 Score: 142.895 bits (359), Expect = 1.897e-31
Identity = 101/340 (29.71%), Postives = 155/340 (45.59%), Query Frame = 0
Query:  291 NTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLD----GDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVH--SFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTI-YVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEHQAGYVLSRYDKPLKIYRKALKEFME 623
            N W A   S  +  K +K + +  + + ++R   G+V  + ++C HR A LS GW         VVCPYH + F+GEG L  +P     +    +    +  Y   E+GG ++LF  +    A E+   P ++PE  DP +R V G  E   +   V EN LDM HI Y+H  SFGN  +P+          D + ++        F     P +      +V  V VE    LP T+  ++  G  ++ I YV  VP+++   +  + L RNF        SP+    D + +  M   L EDKE++E L  E     V    DKP   YRK  +E+++
Sbjct:  327 NFWYAAALSEKVSSKPIK-VDIMSRTVTIWRGEDGKVHCLDNVCPHRGAPLSGGWTKTKNGKSCVVCPYHGWAFNGEGSLEEVPSQSPELAFPRRPLVDS--YPVEERGGFVWLFFGSKSLPADERPPIP-MVPELEDPKWRAVYGEMEFDCAHWSVFENALDMAHIHYLHNGSFGNQDKPV--------INDMDVTRDTWSVGAKFSIHNKPVNPLWKFSEVPAVPVEARAMLPSTSYVKITLGGGIQMITYVNTVPIDENRAINRFCLIRNFAL------SPI---FDGYTRKSMFKILGEDKEMIELLKPEQIRSEVSLEADKPQIAYRKLRQEWID 645          
BLAST of EWM28030.1 vs. NCBI_GenBank
Match: gi|760444623|ref|XP_011399380.1| (Vanillate O-demethylase oxygenase subunit [Auxenochlorella protothecoides] >gi|675354008|gb|KFM26448.1| Vanillate O-demethylase oxygenase subunit [Auxenochlorella protothecoides])

HSP 1 Score: 139.428 bits (350), Expect = 8.654e-31
Identity = 121/383 (31.59%), Postives = 180/383 (47.00%), Query Frame = 0
Query:  252 KSSSSSPSPSTSLSASDVALGKVPEPVNENIARISSKVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFR-AASGEVKAISDICLHRAAALSDGWL----DGDLVVCPYHAYKFDGEGKLRYIP-GVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVH--SFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVK-TIYVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKG--LDHFFQSVMRLTLNEDKEILESLYQEHQAGYVLSRYDKPLKIYRKALKEFME 623
            K ++S P P    SA ++A G V +   E   R S  + N W AV  S+++  KE  K+ +  + + LFR A SG+V+A+ ++C HR A LS GWL     G  VVCPYH +  DG G L+ +P  +++G     KR+   V Y   E+GG ++LF  + R    E+   P+ IPE  D  +R V    E + +   V EN +DM HI Y+H  SFGN   P    E  D     +A  +      TF     P +    + QV EV V     LP T+V     G  +  T +V  VP+    +V  + L R        D + +      D   +  MR  L+EDK ++E L  +        R D P   +RK  +++++
Sbjct:  184 KPATSVPLPRAPSSAEEMAAG-VAKRARELRDR-SGYLKNMWYAVALSANVGSKEPVKVQLCGREMVLFRDATSGDVQALDNVCPHRGAPLSSGWLSEKESGTCVVCPYHGWALDGAGALKDVPAAMNKGEWP--KRSLMNV-YDVEEKGGFVWLFYGSRRMPVNERPPIPY-IPELDDGGWRAVYEEMEFECNHFGVFENAIDMAHIHYLHGDSFGNADAP----EIKDMQVASDAYGI----TATFTITNKPVNAFWSMFQVPEVFVTARVFLPSTSVVTFTLGAGLSFTTFVNTVPLTATRSVNRFALIRRLA----SDRTGLFNARIWDGMARDAMRKILSEDKAMVEQLRYDLLPAEYSVRADLPQVAFRKLRQQYVD 548          
BLAST of EWM28030.1 vs. NCBI_GenBank
Match: gi|926791013|ref|XP_013903980.1| (hypothetical protein MNEG_2999 [Monoraphidium neglectum] >gi|761974935|gb|KIZ04961.1| hypothetical protein MNEG_2999 [Monoraphidium neglectum])

HSP 1 Score: 129.413 bits (324), Expect = 3.603e-27
Identity = 107/353 (30.31%), Postives = 157/353 (44.48%), Query Frame = 0
Query:  287 SKVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFR-AASGEVKAISDICLHRAAALSDGWLDGD------LVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFL----IPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVH--SFGNMQEPLPFSENYDYFFDDEASQLLPY-ARTTFKYRAGPTS-ISKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTI-YVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEH-QAGYVLSRYDKPLKIYRKALKEFM 622
            S + N W A   SS L       + +    I LFR   +GEV  + D C HR A LS G +  D       VVCPYH + FD EG+LR +P  + G   K    +    Y  +EQGG ++LF      G + + ++P +    +PE  DP +  V G  E       V EN +DM HI Y+H  SFGN  +P              A++  PY   + F+    P + + +       V V  +  LP T+   +     V  I +V  VP+ +  ++  + L RNFM           +G D + ++ M   L EDK ++E L+ E  +  Y LS  D P   +RK   E+M
Sbjct:  324 SYLKNFWYAAAISSDLGDDTPLGVDILGGRITLFRDQETGEVLCVDDWCPHRGAPLSGGKVKQDPSTGHTCVVCPYHGWAFDAEGRLRDVPSAEPGRWPKRPLLSS---YPVVEQGGFVWLF-----FGDLPEDLRPPIPGSFVPELNDPKWHAVYGEIEFDCGHWGVFENAIDMAHIHYLHSDSFGNSSQP--------RIHGMTATRPSPYNVESQFRIHNKPMNKLWEWTNTGDSVPVTAKAMLPSTSAVTIDLAHGVSMITFVNTVPISENKSINRFALIRNFMGW---------EGFDDYARNQMFKILGEDKVMVEKLHPEALEHEYSLSP-DGPQVAFRKLRDEWM 650          
BLAST of EWM28030.1 vs. NCBI_GenBank
Match: gi|299115625|emb|CBN75826.1| (Rieske (2Fe-2S) domain protein [Ectocarpus siliculosus])

HSP 1 Score: 126.716 bits (317), Expect = 2.433e-26
Identity = 71/154 (46.10%), Postives = 92/154 (59.74%), Query Frame = 0
Query:  805 EKSARLQERLRSAGGERYLLDFTPSKGRPLWVDTDESTQTIDTSKNLLSNTAVYQGLLGITTKVELNGIISTPAGGQKNKGDALGVKDGGRNKGHRQDVQFTSAKVDVGGFKVTFPHMDVFGVNGWLDTTFVDEHIRICRGNRGSIFVLTRRPL 958
            EK  RL   L+ AG E  L D+  + GRPLW DT ES Q IDT    L+N AVY+G  G TT V+L+ +I               +KD    +  R  V F  A V+VGG KVTFPH+  F   GW++TT++++ IRI RGN+GSIFVLTR+P+
Sbjct:  484 EKKERLAV-LKEAGSEALLFDWKET-GRPLWADTSESVQIIDTKARTLTNRAVYKGWSGFTTTVQLDAVIEP-------------LKD----EASRLMVGFRKAIVNVGGMKVTFPHLQRFSPTGWMETTYLNQGIRIARGNKGSIFVLTRQPV 618          

HSP 2 Score: 87.8113 bits (216), Expect = 3.760e-14
Identity = 36/68 (52.94%), Postives = 50/68 (73.53%), Query Frame = 0
Query:  287 SKVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCP 354
            ++VPN WLAV HSS +K  E+KK+ VD  PI L+R ++G V A SD+C+HR A+L+ GW+  D +VCP
Sbjct:  172 TRVPNLWLAVAHSSDVKAGEVKKVEVDGVPIALWRTSTGSVSAQSDVCIHRGASLARGWIANDRLVCP 239          
BLAST of EWM28030.1 vs. NCBI_GenBank
Match: gi|656719752|gb|KEF42478.1| (Rieske (2Fe-2S) protein [Cyanobium sp. CACIAM 14])

HSP 1 Score: 114.775 bits (286), Expect = 4.840e-24
Identity = 99/345 (28.70%), Postives = 155/345 (44.93%), Query Frame = 0
Query:  291 NTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFP-DAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVHS--FGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISKVVGQVKEVVVENEFH--------LPYTTVTRVKFG-KDVKTIYVVA-VPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQ----EHQAGYVLSRYDKPLKIYRKAL 618
            N W AV H+ +LK + +    +  +   LFR A+G    ++D C HR A+L  GW++G  V CPYH + +D EG    IP    G     +   RT  +   EQ G +++FP +A RA  +   + PF  PE   P +R V G     A  + VVE+ LD  H  +VH   FGN +E     E+ D   + +        R +  ++  P    K VG +K +V +   H        LP      + F  K  + IY  + +PV+D  T+  +   RNF+     D + +   +D         T  ED+ ++E+  +      Q   +L   D+ +  YR+AL
Sbjct:    7 NFWYAVEHAHALKDRPVSVTLLGRR-YLLFRDAAGRPHGLADYCAHRGASLGLGWIEGSCVRCPYHGWSYDTEGHCVRIPADPPGTPIPARARMRT--FPVREQSGFLWIFPGEAQRAADVP--IPPF--PELDQPGWRAVSGHYTWNAHFSRVVESGLDTSHAPFVHRPFFGNREEAS--VESLDILSEPD--------RVSTHHKVKP---PKRVGLLKYIVKKERSHSSATLTGYLPNVNRIALDFNWKGFQYIYFASNIPVDDNTTLTKWIGVRNFLPYRWADGNSIRNTVD---------TYEEDRAVVETQPRGPSWTSQGDELLLASDQLILAYRRAL 322          
BLAST of EWM28030.1 vs. NCBI_GenBank
Match: gi|499563586|ref|WP_011244369.1| (aromatic ring-hydroxylating dioxygenase subunit alpha [Synechococcus elongatus] >gi|56687027|dbj|BAD80249.1| unknown protein [Synechococcus elongatus PCC 6301])

HSP 1 Score: 110.153 bits (274), Expect = 1.962e-23
Identity = 61/180 (33.89%), Postives = 95/180 (52.78%), Query Frame = 0
Query:  291 NTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFL--IPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVH--SFGNMQEPL 466
            N W  V  +  +  + L      +  I L+R ++G++ A+SD C+HR AALS GW++ D +VCPYH +++D +G  R IP   E    +    A+   Y  +E+ GL++LF      G + +  +P L  +PE  DP++R V+G          V ENL+D  H  + H  SFG   +PL
Sbjct:    5 NYWYPVALAQKVGDRPLSVTLCGEA-IALYRDSAGQIHALSDRCVHRGAALSGGWVENDCLVCPYHGWQYDAQGHCRKIPANTEQQ--RIPFAAKVPHYDAIERYGLVWLF-----YGDLPEADRPPLPPLPEYDDPAWRTVQGEVTYTTHYTRVTENLMDFAHAPFTHSGSFGAASDPL 176          
BLAST of EWM28030.1 vs. NCBI_GenBank
Match: gi|504975048|ref|WP_015162150.1| (aromatic ring-hydroxylating dioxygenase subunit alpha [Chamaesiphon minutus] >gi|428019971|gb|AFY96065.1| ring-hydroxylating dioxygenase, large terminal subunit [Chamaesiphon minutus PCC 6605])

HSP 1 Score: 111.309 bits (277), Expect = 6.677e-23
Identity = 93/312 (29.81%), Postives = 139/312 (44.55%), Query Frame = 0
Query:  291 NTWLAV--CHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVHS--FGNMQEPLPFS---ENYDYFFDDEASQLLPYARTTFKYRAGPTSISK--VVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILES 593
            N W AV  C++     K LK   + D+ + L+R A G ++AI + C+HR AAL++GW++ D +VCPYH +++  +G    IP   +   A   + A+   Y   E+ G I+LF     AG I   +  F  P+    + R ++G     A+   V+EN LD  H  +VHS  FGN   P       ENY     D AS       T +     P  + K  V G+   +     F LP  T   V       TI+   +P++   TV  +  +RNF      D    N+ +  F Q         D+ I+ES
Sbjct:    4 NLWYAVEFCNAIGTSPKLLK---ILDRELVLYRTADGRIRAIDNNCIHRGAALANGWIENDCIVCPYHGWQYQTDGTCSKIPS--QAATATIPKPAKMAVYPVGEKYGWIWLFLGDEMAGEIPT-IPNF--PQLESDAIRSIQGEFYWNANYERVLENGLDFAHAPFVHSGAFGNPDRPEIQDLQIENY----PDGASA------TVYLSATPPKGLWKFLVRGERSPIKTRTGFFLPNLTFLEVYLPFGQLTIWTAHIPIDLHTTVSKWINFRNFFTGKWADRDAYNRTIKIFEQ---------DRPIVES 288          
BLAST of EWM28030.1 vs. NCBI_GenBank
Match: gi|499452567|ref|WP_011140031.1| (aromatic ring-hydroxylating dioxygenase subunit alpha [Gloeobacter violaceus] >gi|37519596|ref|NP_922973.1| hypothetical protein gll0027 [Gloeobacter violaceus PCC 7421] >gi|35210587|dbj|BAC87968.1| gll0027 [Gloeobacter violaceus PCC 7421])

HSP 1 Score: 111.309 bits (277), Expect = 1.213e-22
Identity = 75/274 (27.37%), Postives = 130/274 (47.45%), Query Frame = 0
Query:  291 NTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFL--IPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVH--SFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISK-VVGQV-KEVVVENEFHLPYTTVTRVKFGKDVKTIYVVAVPVEDGLTVVHYKLYRNFM 558
            N W  + HS ++     +++ V  +P+ L+R   G V A+ D C HR  ALS GW++G+ + CPYH +++  +G    IP    G+     R A+   +   E+ GL+++F      G + +  +P L  +PE   P +R V G          V+ N +DM H  +VH  +FG  + P        Y  + E  +       + +++  P    K V+G+   +  + + FHLP  T    +FG+    +++V VPV++  T   +   RNF+
Sbjct:   25 NFWYGLAHSPAITSIP-RQVVVMGRPLVLYRTVGGRVVALEDRCAHRDTALSGGWVEGNCLRCPYHGWRYAPDGGCTEIPANQPGVAI--SRLAKVETFPVQERHGLVWVF-----LGELPEAQRPELPSLPEYAAPGWRAVRGEFTWSGHYTRVIANTVDMSHAPFVHAAAFGRKEAP----RIQTYHIESERWR----GSASIQFKTKPAYFLKLVLGKTPPDGSITSTFHLPNVTQVHHRFGRIQFILFLVHVPVDERTTHTCWLHLRNFV 282          
The following BLAST results are available for this feature:
BLAST of EWM28030.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110371|gb|EWM28030.1|0.000e+0100.00rieske (2fe-2s) domain protein [Nannochloropsis ga... [more]
gi|553193141|ref|XP_005855718.1|0.000e+098.52rieske (2fe-2s) domain protein [Nannochloropsis ga... [more]
gi|1004142779|gb|KXZ50765.1|1.897e-3129.71hypothetical protein GPECTOR_15g450 [Gonium pector... [more]
gi|760444623|ref|XP_011399380.1|8.654e-3131.59Vanillate O-demethylase oxygenase subunit [Auxenoc... [more]
gi|926791013|ref|XP_013903980.1|3.603e-2730.31hypothetical protein MNEG_2999 [Monoraphidium negl... [more]
gi|299115625|emb|CBN75826.1|2.433e-2646.10Rieske (2Fe-2S) domain protein [Ectocarpus silicul... [more]
gi|656719752|gb|KEF42478.1|4.840e-2428.70Rieske (2Fe-2S) protein [Cyanobium sp. CACIAM 14][more]
gi|499563586|ref|WP_011244369.1|1.962e-2333.89aromatic ring-hydroxylating dioxygenase subunit al... [more]
gi|504975048|ref|WP_015162150.1|6.677e-2329.81aromatic ring-hydroxylating dioxygenase subunit al... [more]
gi|499452567|ref|WP_011140031.1|1.213e-2227.37aromatic ring-hydroxylating dioxygenase subunit al... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2741rna2741Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications