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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100008g108.7840.mrna |
| Orig protein id | gnl|cribi|Naga_100008g108.7840 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1071251..1073173 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2733 ID=rna2733|Name=rna2733|organism=Nannochloropsis gaditana|type=mRNA|length=4001bp
ACAAGCTCGAGGACAACGACCACCAGTCCCCTCCTTAGGCTTTTGCCCGT
TTGTTGTCTCTGGAGCCTTCTTAAATGGTAGACCCTCGACCTTATGCCCC
AATTACATGCCTGGTGGTAGTGATGCTTGGCATGGGTGGTGAAGTTGATC
AGGAAGTTTCGATGATGAAGCGAGTGCTCCGTCGTTTTGAGTTCCCGCTC
GCTTTCCCACCGGAGCGCAGAAAAAGAAAACTCGCGCGCCTCGCATCTAT
TACCCTGTGACGTGCCCATCTTTTGTGTAATTTTGAACCTTCGGCAACGG
CTCGTGTCGAAAAGAAATGTTGAGGAGAGTATTGTTTGTATGTCTTCAAG
GAGGTAGGGGTCAGAGGGATCGTTGTCCTTCTCATATTGCTTGGTTTGCT
CCTGTCCGAAGCGGAAAACGACCTTATTAGCTGCGCGATTGATCTGTGTC
TTAGATGTGTAGTGCGAATTATCAATCTTCACGAGATTTTGGAAAAGCTC
GAAGGGAGGGGAAGGACGACGAAATTCATGACACATTTTTCGGTTTCATT
TGACGACCTGATCCAACCTCTGCATGTGCGACCTGCCGCCTCAGGTAACT
TATCTACAATTTCTTCACAAACATGCAGCCCTTTCAACAGCGAGCCACGC
CTTGGCCGAGAAAGGCAGTGATATCAGTCTCATACTTGTGATCGGGTGGA
ACAAGGCATTTTGGCCATGGCCTCCTTGGAAGCCATCATGCCCACCACGG
CCAAAACTCCGTTCGGAGCAGACAAGGAGGAACTAGCCAAATACCGTGCG
GGACAAGCGCTCAACCACAAAGCCGTGGCCCCAATTCTGAAGGATATTCA
AGGCCGACGTACGGGGTTGGTGATCGACAACCGCATCAGCAAAGATTCGG
AGGGCTTCGAGGACATTGACGCCTTCTGGGAGATGGCCTCGCAGGGGGAT
GAGAGTTCCTTGCGTGGCGCCCGGCGGTCGGACAGGCGGGCGACAAACCT
GAGTGTGGGTAGGTACTCGCGTGACAGCCAGGGGCTGGCATTGGGCTTGG
ATTCCCTCCCAGGTGAGGATGGGGGACGCCGCAGTAGTGCCAGCAGCCTC
GGGGCCCCCCTATCGGAGGATGTGGTGTCTGCCAAGAAGAACCTTCGGTC
TTCCTCCTTGCCCGCGGAGGCCGTCGCGGCGGCTCGCTCCCGACGGCGCA
GCAGCACGCTGTCGTACGAATCCTCTTCCCCCATGGCGGGATCCACGCCC
CTCTCCGATGGCCCTGGCTTAACTGTCTCTCCCGAGGGCATGGCGGAAGA
TGACCACACGCCGGCGGGTCTGAGCGCTGCTGCCCGTCTTTCCAACATCA
AGGCACCTTCGCGTCGCCTGGATTTCCTCCTGAGCCAGAAGGAGAGTTTG
GGAGGAGGCGCTGTGGTCTTGGGGCAGAGGGAAGGGAAGGAGGGCGGGGG
GGAGAGCGAGGGGGAGAGCGAGGCCCCGACGGAGGAAGAGTTTGAGGGAA
CAGAGGATGCAGCTGCAGTGGCAGCAGTGGCGGGTAGACGGCGTAGCAGT
GCTTCGAACGGGGACGGGGGCGGCTTCGTGGACGACTGGGGTGCAGGGGG
AGCCGACGAGTACCTGGACGAGGGAGTGGGGGAGGAGCCGGTGGAGGAAC
CGGTAGAAGAAGAGGTGGAGGAAGCGAGGGAGGAAAAAGCGGAACTGGTG
GGCACGAAGGAGAAGAAGAAGGGAAAAACGGTGGCTCGGGAGAAGAAAGC
AGCAGAGAGGAAGAAGAAGGGTGGAAAGTCGCAGGCGTCGCGACCCAGGG
CGCCGGAGTCGGAGCGGGACACGGAGGTGAGCTCCTACGAGGACGAAGGA
GAGGACAAGGAAGAGCGGCGAAAGACCCAGGAGCGCTTTCGACGTTTGCG
GCTGTCCGAGTATAACCGAGAAATGGGCGGGAAAAGTTTGTTGCAGGAAG
GATCGGGGGAGGGCGGGGGGGAGGGCCCGGTGGGGGAGCGGCGTTCGACG
CGTCGGAAGGTGCAGCCCCTGCAGTTTTGGAAAAATGAGCGGGTCTTGTA
CGCGGTGGAGAGCACGGAGGGGGTGGATGAGAGACGGAGGCGGGAGGAAG
GCGGGAAGGAGGGCGGGAGGGAGGAAGCGGTGGACTGCATGGCTATGAAG
GAGGTGCTGGTGGCGAACCAGACGCCGGTGGCGCCACGGAGGAGGAAGAG
GAAAGGAGGGCGGGGAGGCGGCCGGGAGGCCAAGCGGGGGAAGGGGGAGG
AAGGGAAGGAGGTCCAGAGGGAGGCCTGGGGGGAGATGGACCCGGAGAGG
GTGTACAAGAAACACCCCAACTACACCTACGTGAAAGACGGGCAAGGGAA
AGGGCGGGTGTGGGACGAGCGGAAAGCCCTGAGGACGACGCGGCGGGTGG
TGATGCGGGTCGACCAGGTGGTGATGCGGCCCCTGGAGAACGAGGAGGAG
GACGGCGTGGCTCTGGAGGCGGGGCACGCCTTCCGAGTCCTGCAAGTGGC
GCGTTCCCGGGAAGACCGAGCGGCGCATGAACCTTCCTTAGCAGGGTATC
CTGGGTGGGTGGCGGGGCACATGACCCTGATGCCGCGCAAGGGGAAGGAC
CCGGAGAACGTGGGCCCATGTTCACAAGTCTTCCACGTGCTTGCCTGCGA
GAAGAACGCCTTGGAGCTGGCGGTAGGGGAGTTGGGGGAGGACGCATTCA
AATTCAATGAGGAGGCGGCGACCCGGTTTTTGTTGGGACCGGGGGACAGC
TTCCACTTGCCCCCCATGAACGTGTACAAATTGTACAACCATTCGAAACG
GGGCCCGGCCAAGGTGTTCTGGACCATCGTCAAGCCTTGGAGCGAGGAGG
AGGAGGAGGGCGGGGCGGGCGGGGCGGAGGGGGGGAAAAAGGGGTCGACT
GGGGGGAAGGACACGCCCGTTGCGGCCAAGCGTGGACGAAAGTCGTCGGT
GGTCACGGGGGCGGGGAAGGGAGGGAGGAAAAGGCCTTCCATGCCAGTCA
GTGCCGTCAAGGAAAATGACGCGCGCTCACAAGCCAGTGAAAGTGAAGAG
GAAGAGCTTGAGGTGTCGAGCGGGGAGGAGAGCGAGAGTGAGCAGGGCGA
GGAAGCGAGTGAAAGCGACTCGTCTGGCTCTGATGTATCGGACCGAAGGG
ATTTACCATCACAAGTCCTCACTAGGACATTTATAACCACCACGATGTGC
ACGGCGAAAATAAAGGTGGAGGTAAATTTCGGAGATTTTTATGAGATTGG
GGCTAAGGGGCCTGACATACAGAAAAAGCTGGCAGCCGTTCTTATTGGTT
TTATAATTATCAAGTGCCTCAAAAAAGTCAACAGAGTAAGGAGGAAAAAG
TCATTGATTGCGTGCATGTCTCTCCGGAACGCAAGCCTTGCTGTGTTGCG
ACAAAAAAAGTCTTTGCTTTCTGCTCTCCAACCGGCGCAGTATACGCAGC
CATGTCTGTTGGTCGGGGGAGGGAGCGTCGGGCAGCATCTTCGGCACTCT
CTTGACCATTTTCGCAAACTTTTCGAAGGTATCGCCGTCCCCAAAGCTGG
GACTGTGTCTTCCTCGTCCTCTCACTCGCATGGTTCCATCCAATATGACG
TTCGGGATAGAGGCACGGAAATAGAGAAGGACCTCGACGCAGCCCGGCGA
GAAGTGGAGCGTCTGATAGCCGACGTGAAAGCCCTTTCGAGCGAACGATT
AAAAGATCCTGTTCAGGCCACGTTTGTCCTTTCCGCGGAGGGGGACGCCG
CAGCATTGTGTTCGACCGTGGGAAGGGAGTTAGGGTTCTGCACCCATCAT
GCCATCCATCACCATGCGCTTATCAAGGCGATTGCCTCGGATTTAGGTAT
ACAAGCTAATCTCCCCCACGACTTTGGATTGGCGCCTTCCACAGCCCATC
ACCAAAAGGTACACTCTGCTCCTAAACTTGCTGTGAGACATGAGCACCGG
ATCTACATGCGTGAAGGCTTGCTGGCACCACGGTCGATAACCCACAGTTG
A back to topprotein sequence of rna2733 >rna2733-protein ID=rna2733-protein|Name=rna2733|organism=Nannochloropsis gaditana|type=polypeptide|length=357bp
MCIGNLCPSATPWWCASICNNLKLLALSRTQRSDRVKLPASRKGSSKYEG
KGGDRATRICNQEGMALLSRKGMRGTCLVVMVVVMGMTVVRGDSADLYAV
QCAKAFGKALKAATTEIESLKGEVAEGKLVSGFGARADGICNTALSTFAM
EAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYK
TQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNF
IAQKNKKLLDVKSQAAQTQQQTMALLQQQQSQMMQLQNALGGGSPLNFGL
SYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLG
VTVNLNV back to topmRNA from alignment at CM002459.1:1071251..1073173- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2733 ID=rna2733|Name=rna2733|organism=Nannochloropsis gaditana|type=mRNA|length=1923bp|location=Sequence derived from alignment at CM002459.1:1071251..1073173- (Nannochloropsis gaditana)
TGGTCACCGTGTTTATGACGATAGAGGCGTGGGAATGGAAGAGAATAACA
TCGTAGGTGGGTAGGCGTAGTCGCGAGCATGTGTATCGGAAATCTTTGCC
CGAGCGCCACTCCCTGGTGGTGCGCTTCAATATGCAACAACCTCAAATTA
CTTGCCCTCTCCCGCACGCAAAGGAGTGACAGGGTAAAGTTGCCAGCATC
CAGGAAAGGCAGCAGCAAGTACGAGGGCAAGGGCGGTGACAGGGCGACTC
GAATTTGTAATCAGGAAGGAATGGCGTTGTTGAGCAGAAAAGGCATGAGG
GGAACATGCCTAGTTGTGATGGTCGTGGTCATGGGAATGACGGTGGTGCG
GGGAGATTCAGCCGATCTGTATGCCGTTCAGTGTGCAAAGGTAAGAATGT
TCATGGGGAAGGCGGGAAATTAGGCGGAAAGATGTTGGATCAAATGCGTA
GTAGAGCCTGTGGCGTAATGTGGGCTTAGTCTGAGCATGAGCATGGCGTC
TAAGAGATGTACGCGACCTTTATCTCGCGACGCTCGGTCAAGGTATTCGA
AAATGGCAGGGTTCTGTCTCGTGGGCCGTCTTTTGGAAAAGCGGTATCGA
ATATGAAGCTCAATGACTAGGATGCATGTAGCTGTAGAGAGGCGAGGGAG
GGCGTCGGGCGCGCCAAGCACATCCGTCATCGTGACGTGCACCGCCTTGT
TATGGGTCATCGAGACGCTTGAATAGGGGGAGAAGAGTAGCATGGTTGCC
GTCTTCGTTTGGACGCGAGACCTCTTCATCCGCAAACCTCTTGCTCACGG
CTCCACCCGCCCTCTACACGGCAGGCATTCGGCAAAGCCCTCAAAGCCGC
GACGACGGAAATCGAAAGTTTGAAAGGCGAAGTGGCGGAAGGAAAACTCG
TGTCAGGTTTTGGGGCCAGGGCGGACGGGATCTGCAACACCGCCTTGAGC
ACCTTTGCGATGGAGGCCCCGGACGCGGACAGGGACCCGATCAAGGTCCA
GATCCATGACAAGCAAGTTGAGGAGCTGGAGAAATCTTTGGACCCACCGC
TGAATGTGCTCTTCATTAGACAGCTCTTGACCTTGCGGGACAAGGCCCTC
CAACGCTACAAGACGCAGGCGAAAGGGACGGAGACCAGCGACTACGAAGC
CATGCAGGCTGCCGACGCCTTCTTTACCTCGGAGGCAGAGGCCTGCCTGC
GGGCCGGTTCCGACTGGGACTATGCTGCCGAGCGGGCTAGCTTGCAGCAA
ACCATGAATTTTATCGCCCAGAAAAACAAGAAGCTCCTGGACGTGAAGAG
CCAAGCGGCGCAAACCCAGCAACAGACCATGGCCCTCCTGCAGCAGCAGC
AGTCCCAGATGATGCAGCTTCAAAACGCCCTCGGAGGCGGAAGCCCCCTC
AATTTTGGTCTGAGCTACCGGATCCCCGACACAAACATCAACGTGCAATA
CACCTTCCAGCAGGGGAAAACGAACGTGCAGTTCACCTGCATTCCGGACG
ACCAAGCGCCCTTCTTGGGACCCCAGGGGTTCACGCACGGCATTGGCCCG
GGGAATCTGGGCGTAACGGTGAATTTGAATGTGTAACGCTTGCCCGGAAT
GTGTAGAAGACGGGGAGAGGGAGAGAGTGAGGGAAGGGGACGAAGGGGGG
AGGAAGACGGGATCAGAATGGAAGGAATCAGAGAAAGTAAAAGCACTCAT
GGACGGGAAACAAGAAAGAGCCCCGCTGGGACCACGTCTGTTTCTCAGCG
CGTTTCATTTCAACTGTGGGTTATCGACCGTGGTGCCAGCAAGCCTTCAC
GCATGTAGATCCGGTGCTCATGTCTCACAGCAAGTTCTCACCGCCCGATC
CTATATCTACATCCATGTCTTCGCGAGTTACTTTCAACTAGGAGCAGAGT
GTACCTTTTGGTGATGGGCTGTG back to topCoding sequence (CDS) from alignment at CM002459.1:1071251..1073173- >rna2733 ID=rna2733|Name=rna2733|organism=Nannochloropsis gaditana|type=CDS|length=2148bp|location=Sequence derived from alignment at CM002459.1:1071251..1073173- (Nannochloropsis gaditana)
GCATTCGGCAAAGCCCTCAAAGCCGCGACGACGGAAATCGAAAGTTTGAA
AGGCGAAGTGGCGGAAGGAAAACTCGTGTCAGGTTTTGGGGCCAGGGCGG
ACGGGATCTGCAACACCGCCTTGAGCACCTTTGCGATGGAGGCCCCGGAC
GCGGACAGGGACCCGATCAAGGTCCAGATCCATGACAAGCAAGTTGAGGA
GCTGGAGAAATCTTTGGACCCACCGCTGAATGTGCTCTTCATTAGACAGC
TCTTGACCTTGCGGGACAAGGCCCTCCAACGCTACAAGACGCAGGCGAAA
GGGACGGAGACCAGCGACTACGAAGCCATGCAGGCTGCCGACGCCTTCTT
TACCTCGGAGGCAGAGGCCTGCCTGCGGGCCGGTTCCGACTGGGACTATG
CTGCCGAGCGGGCTAGCTTGCAGCAAACCATGAATTTTATCGCCCAGAAA
AACAAGAAGCTCCTGGACGTGAAGAGCCAAGCGGCGCAAACCCAGCAACA
GACCATGGCCCTCCTGCAGCAGCAGCAGTCCCAGATGATGCAGCTTCAAA
ACGCCCTCGGAGGCGGAAGCCCCCTCAATTTTGGTCTGAGCTACCGGATC
CCCGACACAAACATCAACGTGCAATACACCTTCCAGCAGGGGAAAACGAA
CGTGCAGTTCACCTGCATTCCGGACGACCAAGCGCCCTTCTTGGGACCCC
AGGGGTTCACGCACGGCATTGGCCCGGGGAATCTGGGCGTAACGGTGAAT
TTGAATGTGTAAATGTGTATCGGAAATCTTTGCCCGAGCGCCACTCCCTG
GTGGTGCGCTTCAATATGCAACAACCTCAAATTACTTGCCCTCTCCCGCA
CGCAAAGGAGTGACAGGGTAAAGTTGCCAGCATCCAGGAAAGGCAGCAGC
AAGTACGAGGGCAAGGGCGGTGACAGGGCGACTCGAATTTGTAATCAGGA
AGGAATGGCGTTGTTGAGCAGAAAAGGCATGAGGGGAACATGCCTAGTTG
TGATGGTCGTGGTCATGGGAATGACGGTGGTGCGGGGAGATTCAGCCGAT
CTGTATGCCGTTCAGTGTGCAAAGGCATTCGGCAAAGCCCTCAAAGCCGC
GACGACGGAAATCGAAAGTTTGAAAGGCGAAGTGGCGGAAGGAAAACTCG
TGTCAGGTTTTGGGGCCAGGGCGGACGGGATCTGCAACACCGCCTTGAGC
ACCTTTGCGATGGAGGCCCCGGACGCGGACAGGGACCCGATCAAGGTCCA
GATCCATGACAAGCAAGTTGAGGAGCTGGAGAAATCTTTGGACCCACCGC
TGAATGTGCTCTTCATTAGACAGCTCTTGACCTTGCGGGACAAGGCCCTC
CAACGCTACAAGACGCAGGCGAAAGGGACGGAGACCAGCGACTACGAAGC
CATGCAGGCTGCCGACGCCTTCTTTACCTCGGAGGCAGAGGCCTGCCTGC
GGGCCGGTTCCGACTGGGACTATGCTGCCGAGCGGGCTAGCTTGCAGCAA
ACCATGAATTTTATCGCCCAGAAAAACAAGAAGCTCCTGGACGTGAAGAG
CCAAGCGGCGCAAACCCAGCAACAGACCATGGCCCTCCTGCAGCAGCAGC
AGTCCCAGATGATGCAGCTTCAAAACGCCCTCGGAGGCGGAAGCCCCCTC
AATTTTGGTCTGAGCTACCGGATCCCCGACACAAACATCAACGTGCAATA
CACCTTCCAGCAGGGGAAAACGAACGTGCAGTTCACCTGCATTCCGGACG
ACCAAGCGCCCTTCTTGGGACCCCAGGGGTTCACGCACGGCATTGGCCCG
GGGAATCTGGGCGTAACGGTGAATTTGAATGTGTAAATGTGTATCGGAAA
TCTTTGCCCGAGCGCCACTCCCTGGTGGTGCGCTTCAATATGCAACAACC
TCAAATTACTTGCCCTCTCCCGCACGCAAAGGAGTGACAGGGTAAAGTTG
CCAGCATCCAGGAAAGGCAGCAGCAAGTACGAGGGCAAGGGCGGTGACAG
GGCGACTCGAATTTGTAATCAGGAAGGAATGGCGTTGTTGAGCAGAAAAG
GCATGAGGGGAACATGCCTAGTTGTGATGGTCGTGGTCATGGGAATGACG
GTGGTGCGGGGAGATTCAGCCGATCTGTATGCCGTTCAGTGTGCAAAG back to top
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