EWM27948.1, cds2725 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27948.1 vs. NCBI_GenBank
Match: gi|585110289|gb|EWM27948.1| (hypothetical protein Naga_100008g108 [Nannochloropsis gaditana]) HSP 1 Score: 740.725 bits (1911), Expect = 0.000e+0 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0
Query: 1 MCIGNLCPSATPWWCASICNNLKLLALSRTQRSDRVKLPASRKGSSKYEGKGGDRATRICNQEGMALLSRKGMRGTCLVVMVVVMGMTVVRGDSADLYAVQCAKAFGKALKAATTEIESLKGEVAEGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMALLQQQQSQMMQLQNALGGGSPLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV 357
MCIGNLCPSATPWWCASICNNLKLLALSRTQRSDRVKLPASRKGSSKYEGKGGDRATRICNQEGMALLSRKGMRGTCLVVMVVVMGMTVVRGDSADLYAVQCAKAFGKALKAATTEIESLKGEVAEGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMALLQQQQSQMMQLQNALGGGSPLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV
Sbjct: 1 MCIGNLCPSATPWWCASICNNLKLLALSRTQRSDRVKLPASRKGSSKYEGKGGDRATRICNQEGMALLSRKGMRGTCLVVMVVVMGMTVVRGDSADLYAVQCAKAFGKALKAATTEIESLKGEVAEGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMALLQQQQSQMMQLQNALGGGSPLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV 357
BLAST of EWM27948.1 vs. NCBI_GenBank
Match: gi|298710796|emb|CBJ32213.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 268.47 bits (685), Expect = 3.724e-85 Identity = 143/287 (49.83%), Postives = 189/287 (65.85%), Query Frame = 0
Query: 73 MRGTCLVVMVVVMGMTVVRGDSADLYAVQCAKAFGKALKAATTEIESLKGEVAEGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMALLQQQQSQMMQLQNALGGG--SPLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV 357
M+ TCL+ + + DS Y + C + K + A +I+ L+ V G+ G +AD ICN AL F+ +A D + DP K I D++VEELE SLD PL +++++QL LR+KALQRYKT AKG+ETSDY+AM AAD +F EAEA RAGS W+++A R SLQ MN +AQ+ KK D +AAQ M LQ QQ Q+ LQN L GG SP NFG +YRIPD+NIN+ T+QQGK N+Q TC+PD+ + LG QGFTHG+GPGNLG++VNL++
Sbjct: 1 MKATCLMFLGLAGRAAGAASDSVSAYHMSCHGVYNKIARQAMGDIKELQTRVDSGEACPALGEKADSICNQALEQFSTDAADTENDPTKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQAMVAADQWFVKEAEASTRAGSSWEFSAVRNSLQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLAALQNQLYGGQPSPWNFGAAYRIPDSNINLSGTYQQGKANLQMTCVPDEYSSMLGAQGFTHGVGPGNLGLSVNLSI 287
BLAST of EWM27948.1 vs. NCBI_GenBank
Match: gi|219126260|ref|XP_002183379.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405135|gb|EEC45079.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 251.136 bits (640), Expect = 4.133e-78 Identity = 128/261 (49.04%), Postives = 173/261 (66.28%), Query Frame = 0
Query: 99 AVQCAKAFGKALKAATTEIESLKGEVAEG-KLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMAL-LQQQQSQMMQLQNALGGGSPLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV 357
A++ KA K L+ A + IE L+ E+ +G K+V FG + ICN AL FA AP+A D K D++++ELE +LD PL VL+++QL LR+ ALQRY+ K + SDYEAM AD+ F EA+ +R GSDWDY AERA LQ MN IA+ ++K +DV+ +AQ QQ M QQQ G SP N G++YRIPDTN N+Q ++QQG+ NVQ +C+PD+ APFLGP GFT+G+GPGNLG+++NL+V
Sbjct: 50 ALESVKA--KVLQTAASSIEDLRSEIVDGGKVVEAFGTATETICNQALEGFASAAPEAGDDANKAATFDRKLQELEAALDAPLQVLYLKQLGFLREAALQRYRAATKTSGASDYEAMLQADSQFVREADGSIREGSDWDYTAERAFLQSVMNNIAESSRKAMDVQMNSAQQQQTAMQFLQSQQQMIQQLQMQLYGQSSPWNVGVAYRIPDTNFNLQGSYQQGRANVQLSCVPDEYAPFLGPNGFTNGVGPGNLGLSLNLSV 308
BLAST of EWM27948.1 vs. NCBI_GenBank
Match: gi|873218612|emb|CEM39216.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 228.794 bits (582), Expect = 8.311e-69 Identity = 114/263 (43.35%), Postives = 176/263 (66.92%), Query Frame = 0
Query: 98 YAVQCAKAFGKALKAATTEIESLKGEVAEGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQ--QTMALLQQQQSQMMQLQNALG-GGSPLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV 357
+A+QC + K L + EI+ ++ V +G +VSG G +AD + +A++ E P K + DK+VEELE+ LD L+V+F++QL LRDKALQ+YK+ + T DY+A+ A +FF +EAEA R S+W+Y +E A L+ ++ +A+ ++K+++ +S+ A+ + + Q QQ + +Q Q A+G GGSP N GL+YRIPDTNIN+ ++QG+T +Q +C+PDD AP LGPQGF +G+GPGNLG++VNLN+
Sbjct: 96 FALQCDRTASKLLSDSAGEIDEMRKTVDKGGVVSGLGDKADTMVASAVAKLRSELPSGAPKQ-KATLMDKKVEELERMLDASLHVVFLKQLRILRDKALQKYKSAMRADGTKDYDAVVTAQSFFNTEAEAARRKNSNWEYGSEAAELKDILDELAKGSRKVVETQSKFAEQMRGLAQILQQQDQQLRAIQQQFAMGAGGSPWNVGLAYRIPDTNINLSGRYEQGRTQIQMSCVPDDSAPMLGPQGFVNGVGPGNLGISVNLNI 357
BLAST of EWM27948.1 vs. NCBI_GenBank
Match: gi|224009568|ref|XP_002293742.1| (hypothetical protein THAPSDRAFT_269759 [Thalassiosira pseudonana CCMP1335] >gi|220970414|gb|EED88751.1| hypothetical protein THAPSDRAFT_269759 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 225.328 bits (573), Expect = 1.194e-68 Identity = 113/248 (45.56%), Postives = 158/248 (63.71%), Query Frame = 0
Query: 112 AATTEIESLKGEVA-EGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMAL-LQQQQSQMMQLQNALGGGSPLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV 357
AA +IE + ++ EG + FGA+AD IC+ A+ FA AP D + +++EELE SLD PL VL++RQL LR++AL Y++ +K ++ SDYEAM AADA F AE+ R S W Y AER+ LQ M+ AQ KKL + + +++Q Q M QQQ G SP N G++YRIPDTN N+Q ++QQG+ NVQ +C+PD+ AP LGP GFT+G+GPGNLG+++NL++
Sbjct: 17 AAHVQIEEARRKIVDEGTAIPDFGAKADEICSQAIEEFARSAPSPSDDNTASSAYARKLEELESSLDAPLQVLYLRQLSLLREQALSSYRSASKASDASDYEAMLAADAQFLRAAESSTRKASTWTYDAERSHLQTVMSEFAQTTKKLTETQVKSSQQQSTAMQFLQHQQQMIQQLQMQLYGQSSPWNVGVAYRIPDTNFNLQGSYQQGRANVQLSCVPDEYAPMLGPNGFTNGVGPGNLGLSLNLSI 264
BLAST of EWM27948.1 vs. NCBI_GenBank
Match: gi|1072235600|gb|OEU20329.1| (hypothetical protein FRACYDRAFT_236404 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 223.787 bits (569), Expect = 1.811e-67 Identity = 126/282 (44.68%), Postives = 180/282 (63.83%), Query Frame = 0
Query: 83 VVMGMTVVRGDSADLYAVQCAKAFGKALKAATTEIESL-KGEVAEGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAK--GTETSDYEAMQAADAFFTSEAEACLR---AGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMALLQQQQSQMMQLQNALGG-GSPLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV 357
++M + RG A YA + K L + I+ L K ++E + FG++AD I NTAL FA AP D D + ++ ++E++E SLD PL VL+++QL LR++ALQ Y+ +K G TS+YEAM ADA+F EAE+ R + +WD+ +ER +LQ MN +A+ + K D++ +A QQ M LQ Q + QLQ L G SP N G++YRIPDTN N+Q ++QQGKTNVQ +C+PD+ APFLGP GFT+G+GPGNLG+++NL+V
Sbjct: 26 MMMPWALPRG-GASSYASKLEAVKEKVLASTLPSIDELRKTIISESTPIEDFGSKADTIVNTALEEFASNAPQDDGDTDETS-YETKLEQIEASLDAPLQVLYLKQLQLLREQALQNYRAASKVNGGGTSEYEAMLQADAYFVREAESSTRDDVSSENWDFTSERIALQSVMNRLAESSNKAQDIQISSASQQQTAMQFLQSQAQMIQQLQQQLYGQASPWNVGVAYRIPDTNFNLQGSYQQGKTNVQLSCVPDEYAPFLGPSGFTNGVGPGNLGLSLNLSV 305
BLAST of EWM27948.1 vs. NCBI_GenBank
Match: gi|944186091|dbj|BAT25214.1| (ORF534, partial [Nitzschia sp. IriIs04]) HSP 1 Score: 218.394 bits (555), Expect = 1.092e-64 Identity = 113/226 (50.00%), Postives = 155/226 (68.58%), Query Frame = 0
Query: 124 VAEGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLR-AGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMALLQQQQSQMMQLQNAL-GGGSPLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPG 347
+ + +V FG++A+ ICN AL FA +PDA D I+D+ +E LE +LD PL +L++RQL LRD+ALQRY+ AK + S+YEAM ADA F AEA +R G+DWDY+AER LQ MN I++ +KK+ D+++++AQ QQ M LQQQQ + QLQ L G +P N G +YR P++N N+Q T+QQG+TNVQ +C+ D+ APFLGP GFT G+GP
Sbjct: 126 INQATIVEDFGSKAETICNNALEDFAKTSPDAT-DASSEAIYDRTLESLEAALDAPLQILYLRQLSMLRDQALQRYRAAAKTSGASEYEAMLQADAQFVRAAEASMREGGADWDYSAERGYLQSVMNSISESSKKVADIQTKSAQQQQTAMQFLQQQQHMIQQLQVQLYGQNTPWNIGFAYRFPNSNFNLQGTYQQGRTNVQVSCVADEYAPFLGPHGFTKGVGPA 350
BLAST of EWM27948.1 vs. NCBI_GenBank
Match: gi|397623951|gb|EJK67209.1| (hypothetical protein THAOC_11791 [Thalassiosira oceanica]) HSP 1 Score: 204.527 bits (519), Expect = 6.380e-60 Identity = 116/291 (39.86%), Postives = 174/291 (59.79%), Query Frame = 0
Query: 69 SRKGMRGTCLVVMVVVMGMTVVRGDSADLYAVQCAKAFGKALKAATTEIESLKGEVA-EGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMAL-LQQQQSQMMQLQNALGGGSPLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV 357
S G G V+ +T +RG A+ Y + L+ A +IE + ++ EG +V+ FG++A+ IC+ A+ FA AP + + ++++ELE SLD PL VL++RQL LR++ L YK+ +K +++SDYEAM AADA F AE+ R S W Y AER++LQ ++ A KKL + + +++Q Q M QQQ G SP N G++YRIPDTN NVQ ++Q G+T+V +C+PD+ AP LGP GFT+G+GPGNLG+++NL++
Sbjct: 21 SWTGNNGHRSAVISTPSFVTSIRG-GANEYETKYEGVKSGVLEKAAKKIEDARRKIEDEGSIVTDFGSKAEEICSAAIEEFARSAPTDTDGALASTAYSRKLQELESSLDSPLQVLYLRQLALLREQCLASYKSASKASDSSDYEAMLAADAQFLRAAESSTRPSSAWTYDAERSALQSVLSDFASTTKKLSETQVKSSQQQSTAMQFLQHQQQMIQQLQMQLYGQSSPWNVGVAYRIPDTNFNVQGSYQSGRTSVSLSCVPDEYAPMLGPNGFTNGVGPGNLGLSLNLSI 310
BLAST of EWM27948.1 vs. NCBI_GenBank
Match: gi|544211874|ref|XP_005536336.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449016648|dbj|BAM80050.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 201.445 bits (511), Expect = 9.377e-56 Identity = 112/261 (42.91%), Postives = 159/261 (60.92%), Query Frame = 0
Query: 99 AVQCAKAFGKALKAATTEIESLKGEVAEGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMALLQQQQSQMMQLQNALGGGS--PLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV 357
A C AF +AL+ + E+ L ++ EG+ +SGFG RA+ + LS F A ++ ++++ ELE LD L LF++QL +R+ ALQ +KT + E A ADA F EAE +R GSDW YA ER+ LQQTM I+ + K+L+ V+ QAA+ Q+Q M +Q QQ+Q+ +Q GG+ N GL+YR PDTN+N+ QQG+T VQ + +PD+QA LGP GFT G+GPGNLGV+ N+N+
Sbjct: 342 AYHCDAAFSEALRNSAEELGELASQLDEGEKISGFGRRAEELLQKYLSGF----ESATEAYAGTEVRERKLAELETVLDASLQSLFLKQLQIIRENALQHFKTASSSEEIPGDFAFYTADALFQREAEESVRPGSDWSYANERSDLQQTMAEISARRKQLIHVQIQAAEQQRQAMQYMQLQQAQLQAVQQQQYGGALGNWNIGLAYRPPDTNVNMSLLHQQGRTQVQLSMVPDEQAGLLGPNGFTSGVGPGNLGVSFNINI 598
BLAST of EWM27948.1 vs. NCBI_GenBank
Match: gi|544211910|ref|XP_005536354.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449016666|dbj|BAM80068.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 201.06 bits (510), Expect = 1.123e-55 Identity = 112/261 (42.91%), Postives = 159/261 (60.92%), Query Frame = 0
Query: 99 AVQCAKAFGKALKAATTEIESLKGEVAEGKLVSGFGARADGICNTALSTFAMEAPDADRDPIKVQIHDKQVEELEKSLDPPLNVLFIRQLLTLRDKALQRYKTQAKGTETSDYEAMQAADAFFTSEAEACLRAGSDWDYAAERASLQQTMNFIAQKNKKLLDVKSQAAQTQQQTMALLQQQQSQMMQLQNALGGGS--PLNFGLSYRIPDTNINVQYTFQQGKTNVQFTCIPDDQAPFLGPQGFTHGIGPGNLGVTVNLNV 357
A C AF +AL+ + E+ L ++ EG+ +SGFG RA+ + LS F A ++ ++++ ELE LD L LF++QL +R+ ALQ +KT + E A ADA F EAE +R GSDW YA ER+ LQQTM I+ + K+L+ V+ QAA+ Q+Q M +Q QQ+Q+ +Q GG+ N GL+YR PDTN+N+ QQG+T VQ + +PD+QA LGP GFT G+GPGNLGV+ N+N+
Sbjct: 341 AYHCDAAFSEALRNSAEELGELASQLDEGEKISGFGRRAEELLQKYLSGF----ESATEAYAGTEVRERKLAELETVLDASLQSLFLKQLQIVRENALQHFKTASSSEEIPGDFAFYTADALFQREAEESVRPGSDWSYANERSDLQQTMAEISARRKQLIHVQIQAAEQQRQAMQYMQLQQAQLQAVQQQQYGGALGNWNIGLAYRPPDTNVNMSLLHQQGRTQVQLSMVPDEQAGLLGPNGFTSGVGPGNLGVSFNINI 597 The following BLAST results are available for this feature:
BLAST of EWM27948.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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