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Properties
| Property Name | Value |
|---|
| Product | alternative nadh-dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100008g100.7832.mrna |
| Orig protein id | gnl|cribi|Naga_100008g100.7832 |
| Gene | NDA |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1052040..1054711 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2726 ID=rna2726|Name=rna2726|organism=Nannochloropsis gaditana|type=mRNA|length=777bp
ATGATCACCAACTACACACTCCCGGCCCTGGCCGCTGGTCTTCGGGACAG
GGAAGAAACGTTGCAGTTCTGCGCGCGACTATTGGAGGACGGCAACCTGG
AGCAATTAGAGCGGGTCCTCCACCCCTACCAAGCTGAACTCATCACCCGC
CGTCGCCGGAAAACCCGCAGCTTGGATTTGGCAGGGGGGCTGACGTCGAA
GCACCTGAACATGTTGCGGAAATACTTGCAGCGATCCCCGCGCCAGCTGA
CCCGCGCGGTCTCCCTGCGCGCGTCGGTGGTGATTCCACTCTGCAATGTG
AACGGGGTGGCCTCCGTGCTCTTCGAACGCCGCTCTCCCTTCGTCCGCTC
CTTCAAGAGCCAAGTGTGTTTCCCAGGGGGGATGGTGGAAGAGTCCTTGG
ACGTGAACATCATCGAAACATCCCTTCGAGAGATGGAGGAAGAGATCGGG
TTCCCCGCCCGGTCGGTGGACGTGCTGGGCGTCTTGCGCTGTGACTGGTC
CGAGGTGCACAAGATCACGGGCATAGGGGTCACGCCCGTGGTAGGCTTTC
TCGGTGATCTGACGGAGAAGGAGCTGTCTCCAAACCCCAAGGAGGTCGCG
GAGTGTTTCACGATTCCTCTGGCCACGCTCCTGGACGTGGAGCACTGGAA
CCGAGAAGAGGAGAAAGGCACTGTGGTCTTTGTAGGAGGGCCCCACGTGA
TCTGGGGGCTGACCGCCCACTTGCTGGATATTTTTTTGAAGGACATTTTG
ATGCGGTACAAAGTGCAAGTGCAATAG back to topprotein sequence of rna2726 >rna2726-protein ID=rna2726-protein|Name=rna2726|organism=Nannochloropsis gaditana|type=polypeptide|length=578bp
MTASVFGAAYTAAFGQHRKNLLLLCLTIVTVLKTHAFLPVRTLGHANRGS
LPSTAQVRHLVAPLQAAPAPSEEPPFWSLVFSDLFLLFDRTLDTVEDIGV
HLRRATERDMDRRFRRDRLTTKAGTKKRVMILGTGWGGHAVTKVVDTGLY
EVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALA
IYPNNQTVRIRSEIPNEVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREH
AFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGV
EFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLE
VLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKS
LIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPA
TGQVAAQHGAFLGRLLNREYDLSTPNPTFDLEKVNAFGKVANVLRLRGRL
EAQAFSFLNLGLLAYVGQANALAQVQTGNLKFGEYTARAGNLLWRSVYLV
KQVSTRNRVLVLNDWLRTRVFGRDISRF back to topmRNA from alignment at CM002459.1:1052040..1054711- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2726 ID=rna2726|Name=rna2726|organism=Nannochloropsis gaditana|type=mRNA|length=2672bp|location=Sequence derived from alignment at CM002459.1:1052040..1054711- (Nannochloropsis gaditana)
CCTCACAGGGACACGAACAAGAACACTTCGATCGGCAGGGTAAGAGGACC
TTCTAAATATGACAGCCTCTGTTTTTGGTGCCGCTTACACGGCCGCATTT
GGACAACATCGTAAGAATTTGTTATTATTATGTCTGACTATTGTGACGGT
ATTGAAGACCCATGCTTTTTTGCCAGTGCGGACTTTGGGTCACGCCAACC
GGGGCAGTTTACCTTCAACCGCGCAAGTGAGACATCTTGTCGCCCCTTTG
CAAGCGGCCCCTGCCCCCTCAGAGGAGCCGCCATTTTGGTCTCTGGTATT
CAGTGATCTATTCCTTTTGTTCGATCGCACGCTCGACACCGTAGAGGACA
TCGGTGTCCACTTGCGCCGGGCAACGGAAAGAGACATGGACCGGCGCTTT
CGCCGAGATCGCCTGACCACGAAGGCTGGCACCAAGAAGCGGGTGATGAT
CTTGGGCACTGGATGGGGGGGGCATGCTGTGACCAAGGTGGTGGATACGG
GGTTGTACGAGGTGGTGATCGTCTCGCCGCGAAACTTCTTCTTGTTCACT
CCCATGCTCGCCGGCAGCTCGGTCGGTACTGTCGATTATCGGTCTATCAT
CGAGCCCATTCGAGCAGCCAACCCTCTTGCAGACTACTACGAAGCACAAG
GTAGGGGAAAGGCCTTGTGGCTTGGGATTTCTGTGCTAGTGTTGCCTGTC
GCTTGATGGCCAGAAGAGAAGTGCCGCGCGTCGGAGTCACTGCAGCCTCG
GTGGTTTTTCGAGGGAGGTGTCTTTTATCCATGTATTTTCCTTTCCCTTT
CAAATGCGCGCCATCCACTTTCCTTCTCACATGCACTTTTTCCAAGCTTT
GTCGAATCCGCCCTTCTCGTAAAACGCGATCGTCACACACTCCTCCCCCT
CTGGGCGTATCCCATGCCCCCCTCTCATCCCCACAGCCCTGGCCATATAT
CCCAACAATCAAACGGTGCGCATCCGCTCTGAAATTCCGAACGAAGTCGG
GGAATACGAGGAATTTTTGGCGCCTTATGATATCCTGGTGTACGGGTGCG
GGGCTCAGAGCGGCACGTTTGGCACTCCGGGCGTGCGGGAGCATGCTTTC
TTCCTGAAAGAAATCAGCGATGCGGTCAAACTACGCCAAGCCCTGGTGGA
TCGCTTTGAACGAGCCAACATGCCAAGCGTGTCCATGGAGGAGAAAAAGC
GGATCTTGAGTTTCGTCGTGGTGGGGGGGGGCCCTACTGGTGTCGAATTT
TCGGGCGAGTTCTCCGATTTTCTTAACAGAGACTTGGCCAAGGTGGGTAA
AACAAACTAAAATAAAAAGTGCGGGGTATCTTGACGGCATGGTGTCAACT
GGGAAAAAACAAGCGCCTAACGGAGGTGCAATATCCTCCACTTGCCTTTT
TCAACAGTACTATCCCGCCTTGGTCGACCTTGTGTCCTTCAAAATTATTC
AAGCCGGTTCCCGCATCCTCCCTGTCTTCGACGCTGCACTGCAAGAACAA
GGGCTAGAGGTGTTGAAGGCGCAGGGTATCGAGGTCATGCTGAATCGCAA
GGTCCTGAAAGTCGAGGAGAAGCACATCGAGCTCGACGGAGGCGAGATAT
TGCCCTACGGTCTCTGTGTGTGGGCTGCGGGTACGGCCCCCCGCGATATC
ACCAAATCCTTGATCGCAGCGATCCCAGAGCAAAGTGCCTCCACGGCAGG
CCAACGAGGTCGACTCTCTGTGGACAGGTGGCTGCGCGTGCAAGGTACGA
ATGGAAGCATCTTGGCCCTGGGAGACGCGGTCGAGGTGGAGGGCCTGCCT
TTGCCAGCCACGGGACAAGTAGCTGCACAGCACGGTGCGTTTCTCGGCCG
CTTGCTCAACCGTGAGTACGACTTGAGCACACCTAACCCGACGTTTGATC
TGGAAAAAGTGAACGCTTTTGGCAAAGTCGCCAACGTGCTCCGTCTTCGC
GGGCGCTTGGAGGCGCAGGCCTTCTCCTTCTTGAACCTGGGCTTGTTGGC
TTACGTGGGCCAAGCCAATGCTCTGGCTCAAGTCCAGACGGGGAACCTCA
AATTCGGAGAATATACGGCCAGGGCTGGCAACCTCTTGTGGCGCAGTGTT
TATCTTGTCAAGCAGGTTTCGACGCGAAACCGAGTCTTGGTGCTGAACGA
CTGGCTGAGGACCCGTGTCTTTGGTCGAGACATTAGTCGCTTCTAGGAAT
GCTTGGGGTTGGAGCGAAAACTTGCAGTGGAATTATAGATGGCTTCAATT
GCCCATTGGGTTTTGTACTTTTGAGGGGAAATTTTCTGATTCGAAAATGT
ATTATTCATGCGATACCACAGAACCAGCGTTACAGACAATTTCATTCCAT
CCCTCTTTGCTCAACGTTGTACCCCTTAAATGGGCACAGGCCCTTTCCTA
GAAGCCCAGAGGACCTGCCGTCTCGAACAGTGAAGGAATTCACACTACTG
GATGTGCTACCATGTGATGCCCCAGGCCGATCCGGGGGTCGAACCAATGA
CACACACGAGCCCTCCCACAACAGCAGGTCAATTTTATGCATTAACATCT
TACATGTCTCGCAATCCCTTTATTTCGTTGTGATAATTCATATTATCTAT
CACAAAGCCACCGGTCGTCGCTATTTTCGCGGTCTTCCAACGAAGCCCTC
TACAACGCCAATGCTTCAGTCC back to topCoding sequence (CDS) from alignment at CM002459.1:1052040..1054711- >rna2726 ID=rna2726|Name=rna2726|organism=Nannochloropsis gaditana|type=CDS|length=5211bp|location=Sequence derived from alignment at CM002459.1:1052040..1054711- (Nannochloropsis gaditana)
TACTATCCCGCCTTGGTCGACCTTGTGTCCTTCAAAATTATTCAAGCCGG
TTCCCGCATCCTCCCTGTCTTCGACGCTGCACTGCAAGAACAAGGGCTAG
AGGTGTTGAAGGCGCAGGGTATCGAGGTCATGCTGAATCGCAAGGTCCTG
AAAGTCGAGGAGAAGCACATCGAGCTCGACGGAGGCGAGATATTGCCCTA
CGGTCTCTGTGTGTGGGCTGCGGGTACGGCCCCCCGCGATATCACCAAAT
CCTTGATCGCAGCGATCCCAGAGCAAAGTGCCTCCACGGCAGGCCAACGA
GGTCGACTCTCTGTGGACAGGTGGCTGCGCGTGCAAGGTACGAATGGAAG
CATCTTGGCCCTGGGAGACGCGGTCGAGGTGGAGGGCCTGCCTTTGCCAG
CCACGGGACAAGTAGCTGCACAGCACGGTGCGTTTCTCGGCCGCTTGCTC
AACCGTGAGTACGACTTGAGCACACCTAACCCGACGTTTGATCTGGAAAA
AGTGAACGCTTTTGGCAAAGTCGCCAACGTGCTCCGTCTTCGCGGGCGCT
TGGAGGCGCAGGCCTTCTCCTTCTTGAACCTGGGCTTGTTGGCTTACGTG
GGCCAAGCCAATGCTCTGGCTCAAGTCCAGACGGGGAACCTCAAATTCGG
AGAATATACGGCCAGGGCTGGCAACCTCTTGTGGCGCAGTGTTTATCTTG
TCAAGCAGGTTTCGACGCGAAACCGAGTCTTGGTGCTGAACGACTGGCTG
AGGACCCGTGTCTTTGGTCGAGACATTAGTCGCTTCTAGCCCTGGCCATA
TATCCCAACAATCAAACGGTGCGCATCCGCTCTGAAATTCCGAACGAAGT
CGGGGAATACGAGGAATTTTTGGCGCCTTATGATATCCTGGTGTACGGGT
GCGGGGCTCAGAGCGGCACGTTTGGCACTCCGGGCGTGCGGGAGCATGCT
TTCTTCCTGAAAGAAATCAGCGATGCGGTCAAACTACGCCAAGCCCTGGT
GGATCGCTTTGAACGAGCCAACATGCCAAGCGTGTCCATGGAGGAGAAAA
AGCGGATCTTGAGTTTCGTCGTGGTGGGGGGGGGCCCTACTGGTGTCGAA
TTTTCGGGCGAGTTCTCCGATTTTCTTAACAGAGACTTGGCCAAGATGAC
AGCCTCTGTTTTTGGTGCCGCTTACACGGCCGCATTTGGACAACATCGTA
AGAATTTGTTATTATTATGTCTGACTATTGTGACGGTATTGAAGACCCAT
GCTTTTTTGCCAGTGCGGACTTTGGGTCACGCCAACCGGGGCAGTTTACC
TTCAACCGCGCAAGTGAGACATCTTGTCGCCCCTTTGCAAGCGGCCCCTG
CCCCCTCAGAGGAGCCGCCATTTTGGTCTCTGGTATTCAGTGATCTATTC
CTTTTGTTCGATCGCACGCTCGACACCGTAGAGGACATCGGTGTCCACTT
GCGCCGGGCAACGGAAAGAGACATGGACCGGCGCTTTCGCCGAGATCGCC
TGACCACGAAGGCTGGCACCAAGAAGCGGGTGATGATCTTGGGCACTGGA
TGGGGGGGGCATGCTGTGACCAAGGTGGTGGATACGGGGTTGTACGAGGT
GGTGATCGTCTCGCCGCGAAACTTCTTCTTGTTCACTCCCATGCTCGCCG
GCAGCTCGGTCGGTACTGTCGATTATCGGTCTATCATCGAGCCCATTCGA
GCAGCCAACCCTCTTGCAGACTACTACGAAGCACAAGTACTATCCCGCCT
TGGTCGACCTTGTGTCCTTCAAAATTATTCAAGCCGGTTCCCGCATCCTC
CCTGTCTTCGACGCTGCACTGCAAGAACAAGGGCTAGAGGTGTTGAAGGC
GCAGGGTATCGAGGTCATGCTGAATCGCAAGGTCCTGAAAGTCGAGGAGA
AGCACATCGAGCTCGACGGAGGCGAGATATTGCCCTACGGTCTCTGTGTG
TGGGCTGCGGGTACGGCCCCCCGCGATATCACCAAATCCTTGATCGCAGC
GATCCCAGAGCAAAGTGCCTCCACGGCAGGCCAACGAGGTCGACTCTCTG
TGGACAGGTGGCTGCGCGTGCAAGGTACGAATGGAAGCATCTTGGCCCTG
GGAGACGCGGTCGAGGTGGAGGGCCTGCCTTTGCCAGCCACGGGACAAGT
AGCTGCACAGCACGGTGCGTTTCTCGGCCGCTTGCTCAACCGTGAGTACG
ACTTGAGCACACCTAACCCGACGTTTGATCTGGAAAAAGTGAACGCTTTT
GGCAAAGTCGCCAACGTGCTCCGTCTTCGCGGGCGCTTGGAGGCGCAGGC
CTTCTCCTTCTTGAACCTGGGCTTGTTGGCTTACGTGGGCCAAGCCAATG
CTCTGGCTCAAGTCCAGACGGGGAACCTCAAATTCGGAGAATATACGGCC
AGGGCTGGCAACCTCTTGTGGCGCAGTGTTTATCTTGTCAAGCAGGTTTC
GACGCGAAACCGAGTCTTGGTGCTGAACGACTGGCTGAGGACCCGTGTCT
TTGGTCGAGACATTAGTCGCTTCTAGCCCTGGCCATATATCCCAACAATC
AAACGGTGCGCATCCGCTCTGAAATTCCGAACGAAGTCGGGGAATACGAG
GAATTTTTGGCGCCTTATGATATCCTGGTGTACGGGTGCGGGGCTCAGAG
CGGCACGTTTGGCACTCCGGGCGTGCGGGAGCATGCTTTCTTCCTGAAAG
AAATCAGCGATGCGGTCAAACTACGCCAAGCCCTGGTGGATCGCTTTGAA
CGAGCCAACATGCCAAGCGTGTCCATGGAGGAGAAAAAGCGGATCTTGAG
TTTCGTCGTGGTGGGGGGGGGCCCTACTGGTGTCGAATTTTCGGGCGAGT
TCTCCGATTTTCTTAACAGAGACTTGGCCAAGATGACAGCCTCTGTTTTT
GGTGCCGCTTACACGGCCGCATTTGGACAACATCGTAAGAATTTGTTATT
ATTATGTCTGACTATTGTGACGGTATTGAAGACCCATGCTTTTTTGCCAG
TGCGGACTTTGGGTCACGCCAACCGGGGCAGTTTACCTTCAACCGCGCAA
GTGAGACATCTTGTCGCCCCTTTGCAAGCGGCCCCTGCCCCCTCAGAGGA
GCCGCCATTTTGGTCTCTGGTATTCAGTGATCTATTCCTTTTGTTCGATC
GCACGCTCGACACCGTAGAGGACATCGGTGTCCACTTGCGCCGGGCAACG
GAAAGAGACATGGACCGGCGCTTTCGCCGAGATCGCCTGACCACGAAGGC
TGGCACCAAGAAGCGGGTGATGATCTTGGGCACTGGATGGGGGGGGCATG
CTGTGACCAAGGTGGTGGATACGGGGTTGTACGAGGTGGTGATCGTCTCG
CCGCGAAACTTCTTCTTGTTCACTCCCATGCTCGCCGGCAGCTCGGTCGG
TACTGTCGATTATCGGTCTATCATCGAGCCCATTCGAGCAGCCAACCCTC
TTGCAGACTACTACGAAGCACAAGTACTATCCCGCCTTGGTCGACCTTGT
GTCCTTCAAAATTATTCAAGCCGGTTCCCGCATCCTCCCTGTCTTCGACG
CTGCACTGCAAGAACAAGGGCTAGAGGTGTTGAAGGCGCAGGGTATCGAG
GTCATGCTGAATCGCAAGGTCCTGAAAGTCGAGGAGAAGCACATCGAGCT
CGACGGAGGCGAGATATTGCCCTACGGTCTCTGTGTGTGGGCTGCGGGTA
CGGCCCCCCGCGATATCACCAAATCCTTGATCGCAGCGATCCCAGAGCAA
AGTGCCTCCACGGCAGGCCAACGAGGTCGACTCTCTGTGGACAGGTGGCT
GCGCGTGCAAGGTACGAATGGAAGCATCTTGGCCCTGGGAGACGCGGTCG
AGGTGGAGGGCCTGCCTTTGCCAGCCACGGGACAAGTAGCTGCACAGCAC
GGTGCGTTTCTCGGCCGCTTGCTCAACCGTGAGTACGACTTGAGCACACC
TAACCCGACGTTTGATCTGGAAAAAGTGAACGCTTTTGGCAAAGTCGCCA
ACGTGCTCCGTCTTCGCGGGCGCTTGGAGGCGCAGGCCTTCTCCTTCTTG
AACCTGGGCTTGTTGGCTTACGTGGGCCAAGCCAATGCTCTGGCTCAAGT
CCAGACGGGGAACCTCAAATTCGGAGAATATACGGCCAGGGCTGGCAACC
TCTTGTGGCGCAGTGTTTATCTTGTCAAGCAGGTTTCGACGCGAAACCGA
GTCTTGGTGCTGAACGACTGGCTGAGGACCCGTGTCTTTGGTCGAGACAT
TAGTCGCTTCTAGCCCTGGCCATATATCCCAACAATCAAACGGTGCGCAT
CCGCTCTGAAATTCCGAACGAAGTCGGGGAATACGAGGAATTTTTGGCGC
CTTATGATATCCTGGTGTACGGGTGCGGGGCTCAGAGCGGCACGTTTGGC
ACTCCGGGCGTGCGGGAGCATGCTTTCTTCCTGAAAGAAATCAGCGATGC
GGTCAAACTACGCCAAGCCCTGGTGGATCGCTTTGAACGAGCCAACATGC
CAAGCGTGTCCATGGAGGAGAAAAAGCGGATCTTGAGTTTCGTCGTGGTG
GGGGGGGGCCCTACTGGTGTCGAATTTTCGGGCGAGTTCTCCGATTTTCT
TAACAGAGACTTGGCCAAGATGACAGCCTCTGTTTTTGGTGCCGCTTACA
CGGCCGCATTTGGACAACATCGTAAGAATTTGTTATTATTATGTCTGACT
ATTGTGACGGTATTGAAGACCCATGCTTTTTTGCCAGTGCGGACTTTGGG
TCACGCCAACCGGGGCAGTTTACCTTCAACCGCGCAAGTGAGACATCTTG
TCGCCCCTTTGCAAGCGGCCCCTGCCCCCTCAGAGGAGCCGCCATTTTGG
TCTCTGGTATTCAGTGATCTATTCCTTTTGTTCGATCGCACGCTCGACAC
CGTAGAGGACATCGGTGTCCACTTGCGCCGGGCAACGGAAAGAGACATGG
ACCGGCGCTTTCGCCGAGATCGCCTGACCACGAAGGCTGGCACCAAGAAG
CGGGTGATGATCTTGGGCACTGGATGGGGGGGGCATGCTGTGACCAAGGT
GGTGGATACGGGGTTGTACGAGGTGGTGATCGTCTCGCCGCGAAACTTCT
TCTTGTTCACTCCCATGCTCGCCGGCAGCTCGGTCGGTACTGTCGATTAT
CGGTCTATCATCGAGCCCATTCGAGCAGCCAACCCTCTTGCAGACTACTA
CGAAGCACAAG back to top
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