EWM27940.1, cds2718 (CDS) Nannochloropsis gaditana

Overview
NameEWM27940.1
Unique Namecds2718
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1054062..1054653 -
Alignment locationCM002459.1:1053420..1053775 -
Alignment locationCM002459.1:1052516..1053304 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27940.1
Productalternative nadh-dehydrogenase
Orig transcript idgnl|cribi|Naga_100008g100.7832.mrna
GeneNDA
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1054062..1054653 -
CM002459.1supercontigCM002459.1:1053420..1053775 -
CM002459.1supercontigCM002459.1:1052516..1053304 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0050660flavin adenine dinucleotide binding
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR023753Pyr_nucl-diS_OxRdtase_FAD/NAD
IPR001327Pyr_OxRdtase_NAD-bd_dom
Homology
BLAST of EWM27940.1 vs. NCBI_GenBank
Match: gi|553187709|ref|XP_005854664.1| (NADH dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422294398|gb|EKU21698.1| NADH dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|585110281|gb|EWM27940.1| alternative nadh-dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 1175.23 bits (3039), Expect = 0.000e+0
Identity = 578/578 (100.00%), Postives = 578/578 (100.00%), Query Frame = 0
Query:    1 MTASVFGAAYTAAFGQHRKNLLLLCLTIVTVLKTHAFLPVRTLGHANRGSLPSTAQVRHLVAPLQAAPAPSEEPPFWSLVFSDLFLLFDRTLDTVEDIGVHLRRATERDMDRRFRRDRLTTKAGTKKRVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPNEVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLSTPNPTFDLEKVNAFGKVANVLRLRGRLEAQAFSFLNLGLLAYVGQANALAQVQTGNLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF 578
            MTASVFGAAYTAAFGQHRKNLLLLCLTIVTVLKTHAFLPVRTLGHANRGSLPSTAQVRHLVAPLQAAPAPSEEPPFWSLVFSDLFLLFDRTLDTVEDIGVHLRRATERDMDRRFRRDRLTTKAGTKKRVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPNEVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLSTPNPTFDLEKVNAFGKVANVLRLRGRLEAQAFSFLNLGLLAYVGQANALAQVQTGNLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF
Sbjct:    1 MTASVFGAAYTAAFGQHRKNLLLLCLTIVTVLKTHAFLPVRTLGHANRGSLPSTAQVRHLVAPLQAAPAPSEEPPFWSLVFSDLFLLFDRTLDTVEDIGVHLRRATERDMDRRFRRDRLTTKAGTKKRVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPNEVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLSTPNPTFDLEKVNAFGKVANVLRLRGRLEAQAFSFLNLGLLAYVGQANALAQVQTGNLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF 578          
BLAST of EWM27940.1 vs. NCBI_GenBank
Match: gi|873227964|emb|CEM17374.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 513.072 bits (1320), Expect = 2.116e-172
Identity = 255/493 (51.72%), Postives = 338/493 (68.56%), Query Frame = 0
Query:   92 LDTVEDIGVHLRRATERDMDRRFRRDRLTTKAGTKKRVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPNEVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLSTPN---PTFDLEKVNAFG---KVANVLRLRGRLEAQAFSFLNLGLLAYVGQANALAQVQTGNLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF 578
            LDTVED+ +H RR   +       + RL T    K R++ILG+GW  HA+ K++DT  ++VVIVSPRN+FLFTPMLA S+VGTV+YRSI EP+R ANPL  YYE +A+ I P  + +R+RS+I    GE  EF  PYD L++  G +S +FG  GV EH +FLKEI DA KLR A+ DRFERAN+P  S EEK+R+L+F V GGGPTGVEF GE  D L  +  K+YP L  +    ++Q+G  ILP+FD +L+  GL+ L+ QG++V L  +V +V  K I L  G  LPYGL VWAAGT PR+ITK LI  +P Q    A Q  +L+VD WLRV  TNG+ILA+GD  +++  PLP T QVAAQ GAFL RLLNR Y++S  +   PT+  ++    G   ++ ++LR+RG+ +A  F+F N G+LAY+G   ALAQ+Q  +L F + + +AG  LWRSVY+VKQVS RNRVLVL DW ++R+FGRD++R 
Sbjct:  169 LDTVEDVSLHWRRQFMKLNKVNLMQKRLDTD---KPRLVILGSGWAAHAMIKIIDTDKFDVVIVSPRNYFLFTPMLAASAVGTVEYRSITEPMRKANPLTSYYEGEAIDIDPEKKEIRVRSKIQTTEGETVEFAVPYDTLIFSPGVKSSSFGIKGVYEHCYFLKEIEDARKLRTAVQDRFERANIPDTSDEEKQRLLTFAVCGGGPTGVEFCGELFDLLRSEFRKFYPKLTPMAKVVLVQSGPNILPIFDESLRSVGLQKLRDQGVQVALETRVQEVGPKSILLSNGTELPYGLAVWAAGTGPREITKRLIEKVPTQQ-EMASQSKKLAVDPWLRVYDTNGTILAMGDCTKMDP-PLPQTAQVAAQQGAFLARLLNRGYNMSKADGRPPTYSYKESEKKGFGERLFSILRIRGKKKADPFNFFNYGMLAYLGDQKALAQIQANDLDFIKASGQAGFYLWRSVYVVKQVSFRNRVLVLFDWFKSRIFGRDLTRL 656          
BLAST of EWM27940.1 vs. NCBI_GenBank
Match: gi|873228141|emb|CEM16721.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 465.692 bits (1197), Expect = 1.264e-155
Identity = 238/498 (47.79%), Postives = 324/498 (65.06%), Query Frame = 0
Query:   92 LDTVEDIGVHLRRATERDMDRRFRRDRLTTKAGTKK-RVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPNEVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLSTPNPTFDLEKVNAFG----------KVANVLRLRGRLEAQAFSFLNLGLLAYVGQANALAQVQTGNLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF 578
            LDTVED  +   R    +       D L    G +K R++++G+GW  HA  K +DT  ++VVI+SPRN+FLFTP+LA +SVGTV+YRSI EP+R ANP A Y+E +A  I+P N+T+R+R+ +    G   +   PYD+LV+  G +S +FG  GV E+ +FLKE+ DA +LR A+ DRFERAN+P V+ EEK+RIL+FVV  GGPTGVEF GE  D L+ +    YP L  L    +IQ+G  ILPVF+ +L+  GL V+   G+EV L  +V  V    + L+ G  LPYGL VW AGT PR+IT+ LI  +P Q+  T+  + +L++D WLRV GTNGSILA+GD  ++E + LP T QVA+Q G +L R+LNR YD+STP+    ++  +  G          K  N+LR  G+ EA  F F N G+LAY+G    LA +Q  +L   + + +AG  LWRSVY VKQVS RNRVLVL DW+++R+FGRD+SR 
Sbjct:   50 LDTVEDASLFWSRQLRSE-------DELGDVKGPRKHRIVVIGSGWSSHAFIKSIDTDKFDVVIISPRNYFLFTPLLAAASVGTVEYRSITEPMRKANPYASYFEGEATDIFPENRTIRMRTRMQTNDGSKIDLNVPYDMLVFSPGVKSSSFGVKGVYENCYFLKEVDDARRLRSAVQDRFERANIPEVTEEEKRRILTFVVCEGGPTGVEFCGELYDLLSTEFKTLYPKLKSLARVVMIQSGPTILPVFEESLRSVGLNVITNAGVEVALETRVNAVGPYSMTLNNGTELPYGLAVWTAGTGPRNITERLIEKVPVQAEMTSRSK-KLTIDPWLRVYGTNGSILAMGDCTKMEPI-LPQTAQVASQQGHYLARMLNRGYDMSTPDNQPPVQTDDNNGDNGDNGGGVRKTFNLLRTLGKREADPFRFFNYGMLAYLGNDKGLAHIQANDLDLIKASGQAGFYLWRSVYFVKQVSLRNRVLVLFDWMKSRMFGRDLSRI 538          
BLAST of EWM27940.1 vs. NCBI_GenBank
Match: gi|873240211|emb|CEL93662.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 466.077 bits (1198), Expect = 7.262e-155
Identity = 241/497 (48.49%), Postives = 320/497 (64.39%), Query Frame = 0
Query:   92 LDTVEDIGVHLRRATERDMDRRFRRDRLTTKAGTKK-RVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPNEVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLSTPN--PTFDLEKVN-------AFGKVANVLRLRGRLEAQAFSFLNLGLLAYVGQANALAQVQTGNLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF 578
            LDTVED  +   R    +       D L  + G +K R++++G+GW  HA  K +DT  ++VVI+SPRN+FLFTP+LA +SVGTV+YRSI EP+R ANP A Y+E +A  I+P N+TVR+R+ +    G   +   PYD LV+  G  S +FG  GV E+ +FLKE+ DA +LR A+ DRFERAN+P V+ E K+RIL+FVV GGGPTGVEF GE  D L+ +    YP L  L    +IQ+G  ILPVF+ +L+  GL V+   G+EV L  +V  V    + L  G  LPYGL VW AGT PR IT+ LI  +  Q+  T+  R +L++D WLRV GTNGSILA+GD  +++ + LP T QVA+Q G +L R+LNR YDLSTP+  P    +  N       A  K  N+LR  G+ EA  F F N G+LAY+G    LA +Q  +L   + + +AG  LWRSVY VKQVS RNRVLVL DW+++R+FGRD+SR 
Sbjct:  108 LDTVEDASLFWSRQLRSE-------DELGDEQGPRKHRIVVIGSGWSSHAFIKSIDTHKFDVVIISPRNYFLFTPLLAAASVGTVEYRSITEPMRKANPYASYFEGEATDIFPENRTVRMRTRMQTNDGSKIDLNVPYDTLVFSPGVMSSSFGVKGVYENCYFLKEVDDARRLRSAVQDRFERANIPEVTEEAKRRILTFVVCGGGPTGVEFCGELYDLLSTEFKTLYPKLKSLARVVMIQSGPTILPVFEESLRAVGLNVITTAGVEVALETRVKAVGPYSMTLHNGTELPYGLAVWTAGTGPRKITERLIEKVAVQAEMTSRAR-KLTIDPWLRVYGTNGSILAMGDCTKMDPI-LPQTAQVASQQGDYLARMLNRGYDLSTPDDQPPVQPDDKNGDNGDNGAVRKAFNLLRTLGKKEADPFRFFNYGMLAYLGNDKGLAHIQANDLDLIKASGQAGFFLWRSVYFVKQVSLRNRVLVLFDWMKSRMFGRDLSRI 595          
BLAST of EWM27940.1 vs. NCBI_GenBank
Match: gi|545705090|ref|XP_005704866.1| (NADH dehydrogenase isoform 2 [Galdieria sulphuraria] >gi|452821314|gb|EME28346.1| NADH dehydrogenase isoform 2 [Galdieria sulphuraria])

HSP 1 Score: 456.447 bits (1173), Expect = 9.125e-152
Identity = 252/533 (47.28%), Postives = 333/533 (62.48%), Query Frame = 0
Query:   58 RHLVAPLQAAPAPSEEP---------PFWSLVFSDLF--LLFDRTLDTVEDIGVHLRRATERDMDRRFRRDRLTTKAGTKKRVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPNEVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLSTPNPTFDLEKVNAFGKVANVLRLRGRLE-AQAFSFLNLGLLAYVGQANALAQVQTGNLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF 578
            R LVA L   P P ++P            + V  D F  L+ +R +DTV+D  VH         +R F   ++  +A  K  ++ILGTGW  H++ KV+DT  Y+V +VSPRN+FLFTPML  ++VGTV++RSI+E  R ANP  DY+EA  + +    Q     S IP E  +++ F   YD LV   GA + TFGTPGV+EH +FLKEISDA  LR+A+V+RFE A+ P +S EEK R+LSFVVVGGGPTG EF+ E  DFL +DL KYYP L   V   ++Q+G  IL  FD  LQE+ LE  +   I+V+   +V +V   HI L  G+ +PYGL VWAAG   + +T+ L++ IPEQ    A  RGRL VD WLRV+G   ++ A+GD   +E +PLPAT QVA Q GA+L RL NR+Y LS P P  + +      K     R  G  E A+ F FL+LG+LAY+G+  A+AQ++TG  K  +       LLW+SVY+ KQVS RNRVLVL DW +TRVFGRD+S+F
Sbjct:   38 RDLVAALPKTPTPQKDPVQEKNQTKRSNETSVNEDSFFSLILNRVVDTVDDAMVHF--------NRTFFPPKIDPQA-KKPTLVILGTGWAAHSLIKVIDTVKYDVRVVSPRNYFLFTPMLPSTAVGTVEFRSIVETFRTANPFVDYFEAHCVDVDLQKQVAVCESNIPGEKRKFQIF---YDYLVIAVGAATNTFGTPGVQEHCYFLKEISDARGLRRAIVERFELASFPDISKEEKCRLLSFVVVGGGPTGCEFAAELHDFLVQDLKKYYPKLFGDVQVLLLQSGDSILTQFDRTLQEKALENFRQSNIQVITKARVTEVTSTHIRLVDGKEIPYGLAVWAAGNGTQPLTRLLLSKIPEQKVDEA--RGRLLVDSWLRVKGAL-NVFAVGDCAAMEPVPLPATAQVAGQQGAYLARLFNRDYCLSCPVPESEEKSTAPLAK----WRPGGSPEVAKPFQFLSLGILAYIGRERAMAQIETGLEKI-KMAGVLTYLLWQSVYITKQVSFRNRVLVLFDWFKTRVFGRDMSQF 550          
BLAST of EWM27940.1 vs. NCBI_GenBank
Match: gi|299472684|emb|CBN78336.1| (NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus])

HSP 1 Score: 458.373 bits (1178), Expect = 2.285e-151
Identity = 248/583 (42.54%), Postives = 349/583 (59.86%), Query Frame = 0
Query:   63 PLQAAPAPSEEPPFWSLVFS--DLFLLFDRTLDTVEDIGVHLRRA----TERDMDRRFRRDRLTTKAGTKKRVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPN----------------------------NQTVRIRSEIPNE-------------VGE---YEEFLAP-----------YDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAI-PEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLS---TPNPT-FDLEKVNAFGKVANVLRLRGRLEAQAFSFLNLGLLAYVGQANALAQVQTG-NLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF 578
            P+  A A  E+   W L  S  D+    DR +DT ED+ +H  RA       ++  +   D     A  K+R+++LGTGWGGHA++KV+D+  YEV+ VSPRN+F+FTPMLA +SVGTVD RSI EPIR ANP   Y   + + I P                             N    + S+ P E              GE    +E LA            YD LVY  G ++GTFG PGVRE+ + LKE +DA +LR A+V+  E A +P V+ EEK+++LSFVV+G GPTGVEF+GE +D +  D+ + +P LV L++  ++ +G ++LP+F+  LQ++GL +L++QGIE++L     +V ++ + L  G+ +PYGLC WA GT  R +T+SLI  I PEQ+ ++  +RG+++VD ++R  GTNG+ILALGDA  ++G+ +P TGQVAAQ GA++ RLLNR YD S    P  T +D        K  +  RLRGRL A  F F+NLG+LAY+G   A+A+V+ G +    +   +AG  LWRS Y+VKQVS RNR+ V  DWL+ R FGRDI+R 
Sbjct:   57 PVLGAKAKEEQDIMWKLKVSPEDVLAFADRAIDTAEDVFMHATRAFKPAARMNLPLQDGEDAPPLTATKKERIVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVIDIKPGDKKVVVALPSPQEKRPPQMPVSAASVAPNVPPLVHSKSPAEGATAATGGGALSRAGEGSLSQEPLASLDDAKPLMELSYDKLVYAVGTKTGTFGVPGVRENCYMLKEANDARQLRAAIVNVLEEACLPGVTDEEKRKLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELVGLINLTVVSSG-KVLPMFEEVLQDRGLNLLQSQGIEILLGSAASEVTKEEVVLKNGKRIPYGLCFWAGGTEARPLTQSLIETIGPEQTDASGSKRGQITVDGYMRALGTNGTILALGDASSIQGVKMPTTGQVAAQEGAYVARLLNRGYDTSVEAAPTMTGYDNSTAGQMEKAVDFFRLRGRLSASPFHFINLGVLAYIGMGQAVAEVKVGKDTPVLDAAGKAGFFLWRSTYVVKQVSPRNRINVAVDWLKVRFFGRDITRL 638          
BLAST of EWM27940.1 vs. NCBI_GenBank
Match: gi|545705092|ref|XP_005704867.1| (NADH dehydrogenase isoform 1 [Galdieria sulphuraria] >gi|452821315|gb|EME28347.1| NADH dehydrogenase isoform 1 [Galdieria sulphuraria])

HSP 1 Score: 454.521 bits (1168), Expect = 4.443e-151
Identity = 251/533 (47.09%), Postives = 333/533 (62.48%), Query Frame = 0
Query:   58 RHLVAPLQAAPAPSEEP---------PFWSLVFSDLF--LLFDRTLDTVEDIGVHLRRATERDMDRRFRRDRLTTKAGTKKRVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPNEVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLSTPNPTFDLEKVNAFGKVANVLRLRGRLE-AQAFSFLNLGLLAYVGQANALAQVQTGNLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF 578
            R LVA L   P P ++P            + V  D F  L+ +R +DTV+D  VH         +R F   ++  +A  K  ++ILGTGW  H++ KV+DT  Y+V +VSPRN+FLFTPML  ++VGTV++RSI+E  R ANP  DY+EA  + +    Q     S IP E  +++ F   YD LV   GA + TFGTPGV+EH +FLKEISDA  LR+A+V+RFE A+ P +S EEK R+LSFVVVGGGPTG EF+ E  DFL +DL KYYP L   V   ++Q+G  IL  FD  LQE+ LE  +   I+V+   +V +V   HI L  G+ +PYGL VWAAG   + +T+ L++ IPEQ  +    RGRL VD WLRV+G   ++ A+GD   +E +PLPAT QVA Q GA+L RL NR+Y LS P P  + +      K     R  G  E A+ F FL+LG+LAY+G+  A+AQ++TG  K  +       LLW+SVY+ KQVS RNRVLVL DW +TRVFGRD+S+F
Sbjct:   38 RDLVAALPKTPTPQKDPVQEKNQTKRSNETSVNEDSFFSLILNRVVDTVDDAMVHF--------NRTFFPPKIDPQA-KKPTLVILGTGWAAHSLIKVIDTVKYDVRVVSPRNYFLFTPMLPSTAVGTVEFRSIVETFRTANPFVDYFEAHCVDVDLQKQVAVCESNIPGEKRKFQIF---YDYLVIAVGAATNTFGTPGVQEHCYFLKEISDARGLRRAIVERFELASFPDISKEEKCRLLSFVVVGGGPTGCEFAAELHDFLVQDLKKYYPKLFGDVQVLLLQSGDSILTQFDRTLQEKALENFRQSNIQVITKARVTEVTSTHIRLVDGKEIPYGLAVWAAGNGTQPLTRLLLSKIPEQKEA----RGRLLVDSWLRVKGAL-NVFAVGDCAAMEPVPLPATAQVAGQQGAYLARLFNRDYCLSCPVPESEEKSTAPLAK----WRPGGSPEVAKPFQFLSLGILAYIGRERAMAQIETGLEKI-KMAGVLTYLLWQSVYITKQVSFRNRVLVLFDWFKTRVFGRDMSQF 548          
BLAST of EWM27940.1 vs. NCBI_GenBank
Match: gi|585112204|gb|EWM29632.1| (Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 416.387 bits (1069), Expect = 6.098e-135
Identity = 243/605 (40.17%), Postives = 338/605 (55.87%), Query Frame = 0
Query:   19 KNLLLLCLTIVTVLKT-HAFLPVRTLGHA----NRGSLPSTAQVRHLV---------APLQAAPAPSEEPPFW---SLVFSDLF-------LLFDRTLDTVEDIGVHLRRATERDMDRRFRRDRLTTKAG--TKKRVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPN-EVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLK-------AQGI------EVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLSTPNPTFDLEKVNAFGKVANVL-----RLRGRLEAQAFSFLNLGLLAYVGQANALAQVQTGNLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF 578
            K   L C  ++  L   HAFL   +   A     R ++P   Q    V          P    P+PS         S +  +L         L ++ +  ++D  + L+ +        FRR     K    T++R+++LGTGWG HA  + VD   YEVV+VSPRNF LFTPMLAGS+VGTV++ SI EPIR  NP ADY EA    +    +++  +S I      + EEF  PYD+L+   GA + T+G PGV+E+  FLK+I+DAVKLR ++ + FERAN+P +S  ++ + L+FV+VG GPTGVEF+ E  DF+  D+ K+YP L+  V  K+++A  R+L +FD ALQ + ++ L         QG+      EV+L   V +V+ + I L  G  LPYGL VWAAG  P  +  +LI  +PEQ    A  RGRL  D WLRV+G  G +LA+GD   +   PLPA  Q A+Q G FLGRLL++  D +   P    E+         +L     R  G++ A+ F FLNLG LAY G  +ALAQ+        + +  AG LLWRSVYL KQVS RNR LV  DW+++R++GRD++RF
Sbjct:   35 KVFFLACCCLLPFLTCLHAFLVAPSSSSALALLKRSAVPPPQQTEEAVRSKLREKNTGPQSEPPSPSTGNSMMEEDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPDPSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSITCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQINDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELRDFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQKLVEQGLIGEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGPLPLVSNLIKQLPEQEEKQAFGRGRLVTDEWLRVKGAEG-VLAIGDCCVINDKPLPANAQAASQQGFFLGRLLSKNIDFTRSIP----ERTGPITTPGELLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKRAI-KSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 633          
BLAST of EWM27940.1 vs. NCBI_GenBank
Match: gi|1072237409|gb|OEU22136.1| (hypothetical protein FRACYDRAFT_205063 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 409.453 bits (1051), Expect = 1.371e-133
Identity = 226/492 (45.93%), Postives = 305/492 (61.99%), Query Frame = 0
Query:  124 GTKKRVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPN-EVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVL-----------------KAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAI-PEQSASTAGQRGRLSVDRWLRVQGTNGSILALGD-AVEVEGL--PLPATGQVAAQHGAFLGRLLNREYDLS--------------TPNPTFDLEKVNAFGKVANVLRLRGRLEAQAFSFLNLGLLAYVGQANALAQVQTG-NLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF 578
            G +++V++LGTGWG  A  K +DT LY+V I+SPRN+F+FTPMLAG+SVGTVDYRSI EPIR  N  A + E+ A  +    +T+   S + +    E  EF  PYD LV   GAQ+ TFG PGVREH  FLK+I DA ++R A+V+ FERAN+P +S EE+  IL+F V+G GPTG+EF+ E  DF+  D  KYYP L+  V  K+I+A S IL  FD +LQE+ +  +                 + + +E++L+  V +V  K I L+ G  + YGL VWAAG  P  +T  ++  +  EQS+     RGR+  D W+R +G+NGSILA GD +   EG   PLPATGQVAAQ G +L +L+N+ YDLS              TP P +   +      +AN     G   A+ F FLNLG+LAY G  +ALAQV TG N +  + T + GN LW+SVY+ KQVS RNR +V+NDW+R ++FGRDI+R 
Sbjct:   57 GQREKVVVLGTGWGAAAFLKGIDTRLYDVTIISPRNYFVFTPMLAGASVGTVDYRSITEPIREINRDARFLESLATDVDEVGKTLTCESVVCDGNSCEINEFSIPYDRLVVTIGAQTNTFGIPGVREHCNFLKQIEDARRIRTAIVNCFERANLPGLSDEERINILTFAVIGAGPTGIEFAAELRDFVEEDGPKYYPTLLKYVRIKVIEASSTILAPFDKSLQEEAITQMNRNVEFKDISIYRLLPERFKLVELLLDSSVKEVTAKTILLNDGNTINYGLSVWAAGNGPLPLTLQIVDKLGDEQSSEQNVARGRIVTDAWMRAKGSNGSILAFGDCSCTTEGPDGPLPATGQVAAQQGEYLAKLMNKGYDLSPTINTNGGIVTLPPTPKPEY---QSTVSESIANFSTRTGEY-AKPFQFLNLGILAYTGGGSALAQVPTGPNAEPIKGTGKIGNALWKSVYISKQVSWRNRFMVVNDWVRRQIFGRDITRL 544          
BLAST of EWM27940.1 vs. NCBI_GenBank
Match: gi|551637439|ref|XP_005821538.1| (hypothetical protein GUITHDRAFT_98053 [Guillardia theta CCMP2712] >gi|428165566|gb|EKX34558.1| hypothetical protein GUITHDRAFT_98053 [Guillardia theta CCMP2712])

HSP 1 Score: 405.216 bits (1040), Expect = 8.759e-132
Identity = 239/523 (45.70%), Postives = 322/523 (61.57%), Query Frame = 0
Query:   88 FDRTLDTVEDIGVHLRRATERDMDRRFRRDRLTTKAGTKK-RVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPNEVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLKAQGIEVMLNRKVLKVEEKHIELD--------GGEILPYGLCVWAAGTAPRDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTN-GSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLSTPNPTFDLEKVNAFGKVANVLRLRG--------------RLEAQAFSFLNLGLLAYVGQANALAQVQTGN----------LKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDIS 576
            F R  DT  DIG+HL R              + +  G +K RV+I G+GWG HA+ K++DT + +VV VSPR++F+FTPMLA +SVGTV+YRSI EP+R+ANP   Y+EA   +I  + +T+R +   P   G   EF   YD LV G G +  TFGTPGV+EH FFLK+I+DA +LR A++D+FE A++P+++ EE++ +LSFVVVGGGPTGVEFSGEF DFLN DL +YYP LV  V  ++IQAG  +L  FD  +Q   L  L +QG++V+LN +V +V  K I  +              Y LCVWAAG +P +++K       +       +RGR+  D WLRV G N GS+ ALGD  E E + LP T QVAAQ GA+L R+ NR++    P+  F  E+      +A  LR R               R+  + F FL+LGLLAYVG  +A+AQV+ G           L+  + +  AG +LWRSVYL KQV+ RNRVLVL DW+++RVFGRDI+
Sbjct:   38 FHRLYDTALDIGLHLSREASS-------MAHMNSGQGERKPRVVIAGSGWGAHAMLKIIDTSVLDVVCVSPRSYFIFTPMLASASVGTVEYRSITEPMRSANPCVTYHEASITSIDADRKTIRCK---PVFEGFDREFDLSYDYLVLGLGMKINTFGTPGVKEHCFFLKDINDAKRLRSAIIDKFESASLPNLTDEERRELLSFVVVGGGPTGVEFSGEFFDFLNEDLKRYYPQLVPFVRTELIQAGDALLNQFDETMQAMALRSLLSQGVKVLLNARVEEVSAKEIRYNIRNPDKTTTTITTKYSLCVWAAGNSPIELSKEFQK---KNQPWKQDKRGRIVTDDWLRVVGINDGSVFALGDCSESESVVLPQTAQVAAQQGAYLARIFNRQF--RGPDKGFLPEQTYG-AALALSLRARARDGDELAKTIIDEHRVFVRPFQFLSLGLLAYVGGRSAIAQVEVGMDSPHKTGTQLLRLSKQSGLAGWILWRSVYLTKQVAFRNRVLVLFDWMKSRVFGRDIA 544          
The following BLAST results are available for this feature:
BLAST of EWM27940.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553187709|ref|XP_005854664.1|0.000e+0100.00NADH dehydrogenase [Nannochloropsis gaditana CCMP5... [more]
gi|873227964|emb|CEM17374.1|2.116e-17251.72unnamed protein product [Vitrella brassicaformis C... [more]
gi|873228141|emb|CEM16721.1|1.264e-15547.79unnamed protein product [Vitrella brassicaformis C... [more]
gi|873240211|emb|CEL93662.1|7.262e-15548.49unnamed protein product [Vitrella brassicaformis C... [more]
gi|545705090|ref|XP_005704866.1|9.125e-15247.28NADH dehydrogenase isoform 2 [Galdieria sulphurari... [more]
gi|299472684|emb|CBN78336.1|2.285e-15142.54NADH dehydrogenase (ubiquinone) [Ectocarpus silicu... [more]
gi|545705092|ref|XP_005704867.1|4.443e-15147.09NADH dehydrogenase isoform 1 [Galdieria sulphurari... [more]
gi|585112204|gb|EWM29632.1|6.098e-13540.17Pyridine nucleotide-disulfide oxidoreductase, FAD/... [more]
gi|1072237409|gb|OEU22136.1|1.371e-13345.93hypothetical protein FRACYDRAFT_205063 [Fragilario... [more]
gi|551637439|ref|XP_005821538.1|8.759e-13245.70hypothetical protein GUITHDRAFT_98053 [Guillardia ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2726rna2726Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications