rna2721, rna2721 (mRNA) Nannochloropsis gaditana

Overview
Namerna2721
Unique Namerna2721
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1706
Alignment locationCM002459.1:1043409..1045188 -

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Properties
Property NameValue
Productiron-containing alcohol dehydrogenase
Orig transcript idgnl|cribi|Naga_100008g93.7934.mrna
Orig protein idgnl|cribi|Naga_100008g93.7934
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1043409..1045188 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100008g93gene2602Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28042.1cds2713Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2721rna2721-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2721 ID=rna2721|Name=rna2721|organism=Nannochloropsis gaditana|type=mRNA|length=1706bp
CTGCCTGTGCCCTGTTTGGCTGAGAAGGACCCTCCTGGCCTTTGTTCTCC
ATGCTCAACACCGGCAGTGCGAATGCGGGGACGAGGGGTAGGAGCAGCCT
GCCCCCCACTTCGTTCGCCTCATCCACCACCTCCTCCGAATCTCCAGCCC
AGGCGCGCCAAAAGCTGTGTGTACGGGCTAAGGACGCGGCGGCGGCCGAA
GTTTGGAGAGCGACCAGATTGGCCACCGCTCGGTTCAGGTTTTGGGTCCG
TTCGCGGGCCGTGTGCGGGACTGTGTAGCAGAGGAAGGCCTTGGTAAACT
TGTACAGAGCTACCTCCTCGGTCGCCAACCGCCCTTCGTAGACTTCCCGG
TCCGCAGGGCTGGCGGAGCCGTGTCGGAGGCGATGGACCTTCTTTTGGAG
CTTGAGGATGGAGGCAAGGAGCGCCTCACGTCCGGCCACCAGGCCTTTGA
GAGCCTGCAGTCGAACGAGCTCGTACTCCAGCCGGGCCAGGAAGAGGTAG
GCCGCTTGCTCGGGGACCCCCTGGTAGCCCGGAACCGTGTCCGCAAACAT
ATTTGCGGCCTGAGATGCAAGTGCTGGAATCGGCGTCCACCTGGGAAAAG
GCGCGAAAGCGACTACATGGGGCTCTTCCGCATGAAAGCTGCCTCTTGTG
CCTTGATCTCCCTCGGAGGTATCCTTGTGGGACGTATCGACGGCGTTCAA
GCTCTCGATCTTTCCTTCCCCCTCCGCGAGGACATGCATGCTCTGACTAA
AGATTTGTATGCCCTTTGCGTATTGGCGGATGCCCTCACCGAGAGCCTGG
TATGCTTCCAGAGTCGCCCTCACAGCGCTTTCCGCCGTGTCGATTTCACC
GCGCACTTTTTCGATCACGACTTCCGGCTCCAGCGGCAGTACAAAAGAGG
AGAGGTATTCCGTCCACTGGACATAGCCACGGTTGTGAGTAGGAGTGAGG
GAGGTGAAAGGAGGAGCGGGCGGTGACTCCTCAGAGGAAAGCGGGGGACA
TGACGCATGAGGCAAGGTTTCCCCTAACCCTTCGTCGAAGAGAGCTACAA
TGGAGTCATTCCCACCCGTGGTGGTGCGCGTTAAGAATTTCTGGGTGAGC
AAGTCGTTGAAGAGAAAAGGAGACGCCGCGATACCGTCCATGAAGTACTG
CAGCCAATTCATGCGACTCTTGATAAAGTCCATGTCCTTGTTATTTCTGA
TGCTTTTTGGAGGCAACGGCGGAATCAACATTCCCTCAGCCCCAAACCGG
CGTTGCAACCGCAAAGACAAGGCTTCAAAGTCCGAGTAGCGATGCCGGAC
ACCATACTTTGGGAACTTAGAGGGACTCTGCGTTGAATTTCCACACTGCA
CGCAGACTGCATAAGTCATAACTTGTCGCGCGGTGAGGAGCCCTCCGCTT
ATTTTGCGAAGCTCAGGAAGCTCGACCACGATACGCAGTTGATGCCTCTC
ATAGTCTTGCAAAATGTGGCTCATGATATTTGACGGTGTCAGGGGAGTCG
TTTCTTATTCCTAGAGGGGCGTACGGCTTTGTGAGAACACAGTGTAGGCA
GCTGAAAAAGTAGTCACACTGACGATACGGTGTAACTCGTCCTTACAAAG
CGCTGTGACTGAAGCCTATGAATCTGCATCCCGTTCATAAGAGAAAAGTG
TGGCAATTATCTGCGCTTCCTCGAATGCAGAATTAAAATAACAAAACAGA
TTACGC
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protein sequence of rna2721

>rna2721-protein ID=rna2721-protein|Name=rna2721|organism=Nannochloropsis gaditana|type=polypeptide|length=449bp
MRHRFALATQFGRPACQLHRPQVKRSSSSSQAVLPLNNSPQHATTQIELN
ENAVDEVGVKHRRLIGPRTVVVSTPTDRAENPHVQRVLARLRGVGIECGT
FSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTG
EGRARDYLRVFHKEKELSDQRLPVVTVPTTASAGGGGIGPQCLALYEAEE
ALVPLHARDLAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSV
RGVLANHAMADLILGGASELGRGLGMAAGNDKGETKRRHLAQGSVAAGRL
LRLVKAPPIQSLARCLAPLFPLATYSQLTAVLLRSYLAVLADRRQQGELG
GEAWNEALLLRMGAATCSARDGPGANGGGLLEMAEWAWEESQKAGLRSLL
DYRALDKETKDAETLAGQVMSVLALFEVEGGPALEADVVRDVLEVSLGT
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mRNA from alignment at CM002459.1:1043409..1045188-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2721 ID=rna2721|Name=rna2721|organism=Nannochloropsis gaditana|type=mRNA|length=1780bp|location=Sequence derived from alignment at CM002459.1:1043409..1045188- (Nannochloropsis gaditana)
CACAGGTCATGCGTCACAGGTTCGCACTGGCAACGCAGTTTGGTCGTCCG
GCATGCCAACTCCATCGACCTCAAGTCAAACGTAGCTCCTCCTCGTCTCA
AGCCGTACTGCCCCTGAATAATAGCCCCCAACACGCCACGACTCAGATAG
AGCTCAATGAAAATGCCGTGGACGAGGTTGGAGTCAAGCACCGACGTCTT
ATCGGCCCTCGAACGGTGGTGGTTAGCACGCCTACAGATAGGGCGGAAAA
TCCTCACGTGCAGCGGGTTTTGGCCCGATTGCGTGGCGTAGGGATTGAAT
GCGGTACATTCTCCATGCTGGAGCGATACCCAACAACGCAAGCCTTGGAT
GAAGGTGCACAAATGGCTAAACGTATGGGAGCGCACTCCATCATAGGGGT
CGGGGGGGGGGGCGCGTTGGATTTGGCCAAAGGTATGGCTGTCCTGGCTT
GTACAGGCGAGGGACGTGCGCGAGACTATCTCCGAGTGTTCCATAAGGAA
AAAGAGCTTTCCGACCAGCGTTTGCCTGTTGTGACGGTGCCAACCACGGC
CAGCGCAGGGGGAGGGGGCATCGGGCCCCAATGCCTGGCTCTGTACGAAG
CCGAAGAGGCCTTGGTGCCCTTGCACGCCCGCGACCTGGCACCCGACCTC
GCCATCGTCGACCCCACCTTGACGGTCACCCTGCCGCTCCAAGCGGAACG
CTCCATGGCCCTGGGAGCCTGGTCGGTATGTTTTGACGCCCTGCTGTGCG
GATCCGTGCGGGGAGTGCTGGCTAACCACGCCATGGCGGACTTGATCCTC
GGGGGCGCCTCGGAACTGGGTCGCGGCCTGGGAATGGCTGCAGGGAACGA
CAAAGGGGAGACAAAGAGGCGGCATTTGGCCCAAGGCAGCGTCGCGGCAG
GTCGTTTGTTGCGCTTGGTGAAGGCCCCCCCCATACAGAGCCTGGCGCGT
TGCCTCGCCCCTCTCTTCCCCCTTGCCACGTACTCGCAACTGACTGCCGT
CCTCCTGCGTTCGTACCTGGCTGTCCTGGCTGATAGGAGGCAGCAGGGCG
AGCTGGGTGGGGAGGCGTGGAACGAAGCATTGCTGCTTCGAATGGGTGCA
GCCACGTGCTCTGCTCGGGACGGTCCAGGTGCCAATGGAGGAGGACTTCT
GGAGATGGCGGAGTGGGCATGGGAGGAGAGCCAAAAGGCGGGCCTGCGCA
GCTTGTTGGACTACCGGGCGTTGGACAAGGAAACCAAGGACGCCGAGACC
TTGGCGGGGCAGGTGATGAGCGTGTTGGCTCTGTTTGAAGTGGAAGGGGG
GCCTGCCTTGGAGGCCGACGTGGTCCGGGACGTGCTCGAAGTGTCGTTAG
GAACGTGACTTCTTGGGTGTCGAGATGAAAGAAATGTACAATCTGTGAAC
GGACGAGGAAGAGTCCGTGAAGGATGGCTTCCTCTGGCGTAGGCAGATTT
TTATGCGCCTTCTCGAGGCACCTTCATCTTGCACCGTGGGACACACACAC
ACAGCCGAGCAATTTCTTTCCCGCCTCCCAGCAGTGGCAGCCAACACCTT
CCGGCGCACGTCTCTTCAGAGCACTGGCATGCCAGTCTCAGCCTCGGTCT
GTTTAGCGGCCTCCCTTCGCTCTCCCACGGTGCCTAGGTTCTCGGCGTCC
TCGTTCCCTCAGCTGCGTGGGTAGTGTCGCTCCCTCCGGCCTCCGCTGTC
CGGGCCAGGGCAACGTGATCTGTCATGCAATCGCTGGGGTCCTCCGTCTT
GGGGGCTCCCAGACCAGTTCCTTCCGATCC
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Coding sequence (CDS) from alignment at CM002459.1:1043409..1045188-

>rna2721 ID=rna2721|Name=rna2721|organism=Nannochloropsis gaditana|type=CDS|length=1350bp|location=Sequence derived from alignment at CM002459.1:1043409..1045188- (Nannochloropsis gaditana)
ATGCGTCACAGGTTCGCACTGGCAACGCAGTTTGGTCGTCCGGCATGCCA
ACTCCATCGACCTCAAGTCAAACGTAGCTCCTCCTCGTCTCAAGCCGTAC
TGCCCCTGAATAATAGCCCCCAACACGCCACGACTCAGATAGAGCTCAAT
GAAAATGCCGTGGACGAGGTTGGAGTCAAGCACCGACGTCTTATCGGCCC
TCGAACGGTGGTGGTTAGCACGCCTACAGATAGGGCGGAAAATCCTCACG
TGCAGCGGGTTTTGGCCCGATTGCGTGGCGTAGGGATTGAATGCGGTACA
TTCTCCATGCTGGAGCGATACCCAACAACGCAAGCCTTGGATGAAGGTGC
ACAAATGGCTAAACGTATGGGAGCGCACTCCATCATAGGGGTCGGGGGGG
GGGGCGCGTTGGATTTGGCCAAAGGTATGGCTGTCCTGGCTTGTACAGGC
GAGGGACGTGCGCGAGACTATCTCCGAGTGTTCCATAAGGAAAAAGAGCT
TTCCGACCAGCGTTTGCCTGTTGTGACGGTGCCAACCACGGCCAGCGCAG
GGGGAGGGGGCATCGGGCCCCAATGCCTGGCTCTGTACGAAGCCGAAGAG
GCCTTGGTGCCCTTGCACGCCCGCGACCTGGCACCCGACCTCGCCATCGT
CGACCCCACCTTGACGGTCACCCTGCCGCTCCAAGCGGAACGCTCCATGG
CCCTGGGAGCCTGGTCGGTATGTTTTGACGCCCTGCTGTGCGGATCCGTG
CGGGGAGTGCTGGCTAACCACGCCATGGCGGACTTGATCCTCGGGGGCGC
CTCGGAACTGGGTCGCGGCCTGGGAATGGCTGCAGGGAACGACAAAGGGG
AGACAAAGAGGCGGCATTTGGCCCAAGGCAGCGTCGCGGCAGGTCGTTTG
TTGCGCTTGGTGAAGGCCCCCCCCATACAGAGCCTGGCGCGTTGCCTCGC
CCCTCTCTTCCCCCTTGCCACGTACTCGCAACTGACTGCCGTCCTCCTGC
GTTCGTACCTGGCTGTCCTGGCTGATAGGAGGCAGCAGGGCGAGCTGGGT
GGGGAGGCGTGGAACGAAGCATTGCTGCTTCGAATGGGTGCAGCCACGTG
CTCTGCTCGGGACGGTCCAGGTGCCAATGGAGGAGGACTTCTGGAGATGG
CGGAGTGGGCATGGGAGGAGAGCCAAAAGGCGGGCCTGCGCAGCTTGTTG
GACTACCGGGCGTTGGACAAGGAAACCAAGGACGCCGAGACCTTGGCGGG
GCAGGTGATGAGCGTGTTGGCTCTGTTTGAAGTGGAAGGGGGGCCTGCCT
TGGAGGCCGACGTGGTCCGGGACGTGCTCGAAGTGTCGTTAGGAACGTGA
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Synonyms
Publications