EWM28042.1, cds2713 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28042.1 vs. NCBI_GenBank
Match: gi|585110383|gb|EWM28042.1| (iron-containing alcohol dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 901.738 bits (2329), Expect = 0.000e+0 Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0
Query: 1 MRHRFALATQFGRPACQLHRPQVKRSSSSSQAVLPLNNSPQHATTQIELNENAVDEVGVKHRRLIGPRTVVVSTPTDRAENPHVQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLRVFHKEKELSDQRLPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARDLAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSVRGVLANHAMADLILGGASELGRGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLFPLATYSQLTAVLLRSYLAVLADRRQQGELGGEAWNEALLLRMGAATCSARDGPGANGGGLLEMAEWAWEESQKAGLRSLLDYRALDKETKDAETLAGQVMSVLALFEVEGGPALEADVVRDVLEVSLGT 449
MRHRFALATQFGRPACQLHRPQVKRSSSSSQAVLPLNNSPQHATTQIELNENAVDEVGVKHRRLIGPRTVVVSTPTDRAENPHVQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLRVFHKEKELSDQRLPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARDLAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSVRGVLANHAMADLILGGASELGRGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLFPLATYSQLTAVLLRSYLAVLADRRQQGELGGEAWNEALLLRMGAATCSARDGPGANGGGLLEMAEWAWEESQKAGLRSLLDYRALDKETKDAETLAGQVMSVLALFEVEGGPALEADVVRDVLEVSLGT
Sbjct: 1 MRHRFALATQFGRPACQLHRPQVKRSSSSSQAVLPLNNSPQHATTQIELNENAVDEVGVKHRRLIGPRTVVVSTPTDRAENPHVQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLRVFHKEKELSDQRLPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARDLAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSVRGVLANHAMADLILGGASELGRGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLFPLATYSQLTAVLLRSYLAVLADRRQQGELGGEAWNEALLLRMGAATCSARDGPGANGGGLLEMAEWAWEESQKAGLRSLLDYRALDKETKDAETLAGQVMSVLALFEVEGGPALEADVVRDVLEVSLGT 449
BLAST of EWM28042.1 vs. NCBI_GenBank
Match: gi|298706344|emb|CBJ29353.1| (Similar to Iron-containing Alcohol Dehydrogenase [Ectocarpus siliculosus]) HSP 1 Score: 114.005 bits (284), Expect = 4.543e-24 Identity = 118/360 (32.78%), Postives = 168/360 (46.67%), Query Frame = 0
Query: 86 RVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLR----VFHKEKELSDQR------LPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARDLAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSVRGV----LAN-HAMADLILGGASELGRGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLFPLATYSQLTAVLLRSYLAVLADR-RQQGELGGEAWNEALLLRMGAATCSARDGPGANGGGLLEMAEWAWEESQKAGLRSLLDYRALDK--ETKDAETLAGQVMSVLALFE 427
R L LR GI C F+ YPT +DE +MA+R+GA I+ VG GG +D AK A L + G + +L V E S R LP+V +PT+A AG G +CL + +E LVPL + +A+VDP L +L +MAL A S C DALL + L N A+ DL G + GL +A + K + R LA GSV AG L APP Q +AR L +Y + A++ + V+ D Q G+A + R + + S G G +G L+ +W E+Q+ LLD+ +L T A+ +A + +LA+ E
Sbjct: 59 RCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLH-SSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANG-RCLVWHPDDEVLVPLAEEGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLARELALASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGKNKVARELLAIGSVCAGELAAATPAPPTQLVARATGSLLGRHSYPSVCAMV---FPHVVGDMLSQASSFSGDAQAAEAIERALSLSASLFLGDGNDGQALM-----SWLEAQE---HELLDFGSLSSVDSTITAKDVATNIDMLLAIEE 405
BLAST of EWM28042.1 vs. NCBI_GenBank
Match: gi|771523515|ref|WP_045176143.1| (alcohol dehydrogenase [Caldicellulosiruptor sp. Wai35.B1]) HSP 1 Score: 108.997 bits (271), Expect = 1.788e-22 Identity = 89/285 (31.23%), Postives = 137/285 (48.07%), Query Frame = 0
Query: 56 EVGVKHRRLIGPRTVVVSTPT-DRAENPHVQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLRVFHKEKELSDQRLPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARD-LAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSVRGVLANHAMADLI-LGGASELGRGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLFPLATYSQLTAVLLRSYL 337
E+G+ +R G + +VV P + + Q +L L+ GIE F + PT ++ EGA++AKR +IG+GGG A+D AK +AV A T EG A DYL + +KE +++ LP++ VPTT AG G + L EE A D + +AIVDP LT+T+P S ++ CF++ + + N D++ L + L A N K R +A AG L V +L + + FP ++ Q AV+ ++L
Sbjct: 21 ELGIWAKRF-GKKVLVVVDPNVKKFLSQQYQEMLDTLKSEGIETVVFDHVIPNPTLDSIQEGAEIAKREKVEFVIGIGGGSAIDTAKAIAV-AATHEGTAWDYL---YFKKEPTEKTLPIIGVPTT--AGTGTQTSRVSVLTNTEEKCKSAIASDNIICKVAIVDPELTLTVPPAVTASTGFDVFTHCFESYIN------VNNQPYVDVLALEAIKVVIEYLKKAYDNPKDLEARTKMAWADTLAGCCLANVGTTIPHALGQAIGGHFPHVSHGQSLAVVYPAFL 292
BLAST of EWM28042.1 vs. NCBI_GenBank
Match: gi|503194947|ref|WP_013429608.1| (iron-containing alcohol dehydrogenase [Caldicellulosiruptor kronotskyensis] >gi|312202131|gb|ADQ45458.1| iron-containing alcohol dehydrogenase [Caldicellulosiruptor kronotskyensis 2002]) HSP 1 Score: 104.76 bits (260), Expect = 4.122e-21 Identity = 87/289 (30.10%), Postives = 135/289 (46.71%), Query Frame = 0
Query: 56 EVGVKHRRLIGPRTVVVSTPTDRAENPHVQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLRVFHKEKELSDQRLPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARD-LAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSVRGVLANHAMADLI-LGGASELGRGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLFPLATYSQLTAVLLRSYLAVLAD 342
E+G+ +R VVV ++ + Q +L L GIE F + PT ++ EGA++AKR +IG+GGG ++D AK +AV A T EG A DYL + +KE +++ LP++ VPTT AG G + L EE A D + +AIVDP LT+T+P S ++ CF++ + + N D++ L + + L A N R +A AG L V +L + + FP ++ Q AV+ ++L D
Sbjct: 22 ELGIWAKRFGKKVLVVVDPNVEKFLSQQYQEMLDSLHSEGIETIVFDHVIPNPTLDSIQEGAEVAKREKVDFVIGIGGGSSIDTAKAIAV-AATHEGSAWDYL---YFKKEPTEKTLPIIGVPTT--AGTGTQTSRVSVLTNTEEKCKSAIASDNIICKVAIVDPELTLTVPPAVTASTGFDVFTHCFESYIN------VNNQPYVDMLALEAIGIVIKYLRKAYDNPGDLGARTKMAWADTLAGCCLANVGTTIPHALGQAIGGHFPHVSHGQSLAVVYPAFLDYTVD 298
BLAST of EWM28042.1 vs. NCBI_GenBank
Match: gi|656283554|ref|WP_029229188.1| (hypothetical protein [Caldicellulosiruptor acetigenus]) HSP 1 Score: 104.76 bits (260), Expect = 4.399e-21 Identity = 88/290 (30.34%), Postives = 138/290 (47.59%), Query Frame = 0
Query: 56 EVGVKHRRLIGPRTVVVSTPT-DRAENPHVQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLRVFHKEKELSDQRLPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARD-LAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSVRGVLANHAMADLILGGASELG-RGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLFPLATYSQLTAVLLRSYLAVLAD 342
E+G+ +R G + +VV P ++ + Q +L L IE F + PT ++ EGA++AK+ +IG+GGG A+D AK +AV A T EG A DYL + +KE +++ LP++ VPTT AG G + L EE A D + +AIVDP LT+T+P S ++ CF++ + + N D++ A E+ + L A N R +A AG L V +L + + FP ++ Q AV+ ++L D
Sbjct: 21 ELGIWAKRF-GKKVLVVVDPNVEKFLSQQCQEMLDSLHSECIETIVFDHVIPNPTLDSIQEGAEVAKKEKVDFVIGIGGGSAIDTAKAIAV-AATHEGTAWDYL---YFKKEPTEKTLPIIGVPTT--AGTGTQTSRVSVLTNTEEKCKSAIASDNIICKVAIVDPELTLTVPPAVTASTGFDVFTHCFESYIN------VNNQPYVDMLALEAIEIVIKYLKKAYDNPGDLVARTKMAWADTLAGCCLANVGTTIPHALGQAIGGHFPHVSHGQSLAVVYPAFLDYTVD 297
BLAST of EWM28042.1 vs. NCBI_GenBank
Match: gi|931534444|gb|KPL10701.1| (alcohol dehydrogenase [Bacteroides sp. SM23_62]) HSP 1 Score: 96.2857 bits (238), Expect = 3.883e-18 Identity = 71/206 (34.47%), Postives = 106/206 (51.46%), Query Frame = 0
Query: 42 HATTQIELNENAVDEVGVKHRRLIGPRTVVVSTPTDRAENPHVQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLRVFHKEKELSDQR-LPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARDLAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALL 246
H +++I + E G R+ G R ++V+TP D+ P +RV L G+E F + PTT+ G++MAK GA I+G+GGG ++D AK +AV A T EG A DYL F+KE + LPV+ V TT S G + + AE L+ + P +AIVDP L +TLP+ +S F++++
Sbjct: 7 HQSSEIVFGSGRIAEAGQIVRKY-GNRCLMVTTP-DKPLRPLYERVKNILAEAGVEVAHFDGVIPNPTTETSAAGSKMAKEHGADVILGLGGGSSMDAAKAIAVEA-THEGSAWDYL--FYKEPAPDPSKVLPVIAVSTT-SGTGSQVTQVSVITNTAERDKSALYNPVIFPKVAIVDPELMITLPVSVTAPTGFDVFSHAFESMI 206
BLAST of EWM28042.1 vs. NCBI_GenBank
Match: gi|748788422|ref|WP_040036799.1| (hypothetical protein [Bacillaceae bacterium MTCC 10057] >gi|805320698|gb|KKB44474.1| Alcohol dehydrogenase [Bacillaceae bacterium MTCC 10057]) HSP 1 Score: 93.9745 bits (232), Expect = 2.934e-17 Identity = 70/239 (29.29%), Postives = 117/239 (48.95%), Query Frame = 0
Query: 84 VQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLRVFHKEKELSDQRLPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARDLAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALL--CGSVRGVLANHAMADLILGGASELGRGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLF 320
++ VL +++ +EC FS +E PTT+ ++ G + +R +IGVGGG +D+AK +++LA G GR DY + + S+ LP++ +PTTA G + E L + + LAP+ AI+DP+LT+TLP AL A + DAL+ S +AN L L + L A N + + R + GS+ AG + + +++ L+ ++
Sbjct: 51 LELVLQQVKKTNVECSVFSNVEANPTTETVEAGMHLLERFKPDLLIGVGGGSPIDVAKAISMLATNG-GRITDYEGI----DQFSNTPLPLLAIPTTAGTGSEVTVFTVITDTSTEYKLT-VGGKSLAPNWAILDPSLTLTLP------PALTA-ATGLDALVHAIESYTSTMANVLTETLALEAIRTIASNLRQAVFNGENSSARGAMLYGSLLAGIAFNNTRLGNVHAMSHPLSAIY 276
BLAST of EWM28042.1 vs. NCBI_GenBank
Match: gi|1101200552|gb|OIP51152.1| (alcohol dehydrogenase [Desulfobacterales bacterium CG2_30_60_27]) HSP 1 Score: 93.5893 bits (231), Expect = 3.784e-17 Identity = 76/260 (29.23%), Postives = 125/260 (48.08%), Query Frame = 0
Query: 62 RRLIGPRTVVVSTPTDRAENPHVQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLRVFHKEKELSDQRLPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARDLAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSVRGVLANHAMADLILGGASEL-GRGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLF 320
R L G + VV PT + +RV A L+ G+ + L P D+GA++AK+ GA ++G+GGG A+D+AK +++L G G+A DYL + +K LP + +PTTA G + + + E + ++ L PD+AI+DP LTV++P Q + + A + +A + H M+D+ A EL L +A N R ++ GS+ G+ L + ++A L +F
Sbjct: 29 RELGGSKIFVVVDPT-LVKAGLAERVTAPLKAAGLPFVLYDQLAPEPGLTLADKGAKLAKKAGADCVVGMGGGSAMDVAKAISILLTNG-GKAEDYLGLGKIKKP----GLPKIMIPTTAGT-GAEVTFTAVFINEKTGSKGGMNGDPLYPDVAILDPALTVSMPPQVTATTGIDALTHAIEAFVSTQA------HPMSDMYALQAIELISENLPLAYANGNNLEARANMLMGSLLGGKALATAGVGLVHAMAYPLGGMF 275
BLAST of EWM28042.1 vs. NCBI_GenBank
Match: gi|1084880457|gb|OGR07859.1| (alcohol dehydrogenase [Deltaproteobacteria bacterium RIFOXYD12_FULL_50_9]) HSP 1 Score: 92.8189 bits (229), Expect = 5.458e-17 Identity = 79/277 (28.52%), Postives = 132/277 (47.65%), Query Frame = 0
Query: 45 TQIELNENAVDEVGVKHRRLIGPRTVVVSTPTDRAENPHVQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLRVFHKEKELSDQRLPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARDLAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSVRGVLANHAMADLI-LGGASELGRGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLF 320
T+I N + ++ + R L G + + P RA ++RV L GI + ++ P + D+GA++A++ GA I+GVGGG A+D+AK +++L G G+A DYL + +K LP + VPTTA G + + + E + ++ L PD AI+DP LT++LP S + A++ +A + HA++D+ L + R L A N R + GS+ AG+ L + ++A L +F
Sbjct: 12 TRIRFGINTIADLPDQVRSLNGTKVFMAVDPGVRAAG-LLERVTRPLEEAGIPYEIYDRIDPEPGLKLADKGAELARKAGADCIVGVGGGSAMDVAKAISILMTNG-GKAVDYLGLGKIKK----PGLPKIMVPTTAGT-GAEVTFTAVFINEKTSSKGGMNGDPLYPDAAILDPALTLSLPPGVTASTGIDAFTHALEAYVSTQA------HAISDMYALEALDLIARNLPKAYANGDNIEARSAMLLGSLLAGKALATAGVGLVHAMAYPLGGMF 275
BLAST of EWM28042.1 vs. NCBI_GenBank
Match: gi|931427208|gb|KPK13177.1| (alcohol dehydrogenase, partial [Anaerolineae bacterium SG8_19]) HSP 1 Score: 91.2781 bits (225), Expect = 1.365e-16 Identity = 96/341 (28.15%), Postives = 142/341 (41.64%), Query Frame = 0
Query: 65 IGPRTVVVSTPTDRAENPHVQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLRVFHKEKELSDQRLPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARDLAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSVRGVLANHAMADLILGGASELGRGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLFPL---ATYSQLTAVLLRSYLAVLADRRQQGELGGEAWNEALLLRMGAATCSARDGPGANGGGLLEMAEWAWEESQKAGLRSLLDY 402
G R VV+ + P +L +L G GIE T+ + TT AL EGA A+++GA +IG+GGG LD K +A L T G DYL V + + L + P + +PTTA G LA E + V L + + P LA+VDP LT ++P S L A + + + LAN + G GR L A N + R+ +A S+ G L K + A + +FP A ++L ++ + + LA R +++ L G T + DG W E SQ + L D+
Sbjct: 28 FGQRAFVVTGQNQASAIP----LLEQLNGQGIEFTTYPVTGEPTTTVAL-EGAWQARKVGAQMVIGLGGGSVLDAGKAIAAL-LTNSGDLFDYLEVIGRGQPLKEPSAPYIAIPTTAGTGAEVTRNAVLASPE-HKVKVSLRSPTMLPRLAVVDPELTYSMPPAVTASTGLDALTQVMEPYVSH-----LANPLTDAVCRQGIQRAGRSLRRAFDNGQDTEARKDMALASLFGGLALANAKLGAVHGFAGPIGGMFPAPHGAICARLLPFVMETNVNALASREPDSSALAR-YDDVARLLTGDDTARSADG-----------VAWVQELSQALAVPPLSDF 344 The following BLAST results are available for this feature:
BLAST of EWM28042.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|