rna2707, rna2707 (mRNA) Nannochloropsis gaditana

Overview
Namerna2707
Unique Namerna2707
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1833
Alignment locationCM002459.1:1011765..1012967 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100008g79.7831.mrna
Orig protein idgnl|cribi|Naga_100008g79.7831
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1011765..1012967 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100008g79gene2590Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27939.1cds2699Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2707rna2707-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2707 ID=rna2707|Name=rna2707|organism=Nannochloropsis gaditana|type=mRNA|length=1833bp
TTGCATGACCGGTTTCCGCCTCCGCGAGCCTCAAAAATTCAAACATTCCG
GTGATATCTCCATAGTGATGACGAGGAAAATGCCGACCATGCAGTTGCCT
GCCTGTCTCCCAGCGTGGGAGTCCTCGATGAAACTTCAGAGGCGAATGGA
TTTGGTCCAGTTTCTTTCTTTGAGAGCGATTCAGCATTGTTGGGGAAGTG
CATAGCATTATGTAAGTGGTGGCAAAATGCGCCGATCGCGTTGCTTTGTA
TGGCTACGAAGCACTACTGGTTGGAAGGTGCGCATCTGCGGGAATGGCTT
GATGCCGGAAGCCAAACATGCTCTGGGATAGTATTCGCTCTCCACTTTAA
GTGCCAGCTAGCATATATCAGTCTGACATTATTGCTCCTCCAAAGTAATG
TAGATGGTATCAAAACTCCACGTAGGGATAAATTTTGTATGGTTGCCATT
GCCAAGTCTCTCCTAGTTGCGGAGCTCGCTACTCGGTCGGGAGGGTGCTT
TTTAACGCCTTCGCGCGCAACGACAATGCCCCGTTTGCGCCCAGAAAGTG
CGAAATTGAGCACGAAGGCTGTTTCACCCTCCTCGTCTTTTTCCTCCACC
TCATCTGCCTACACTTGGATTGCTGCCTACAAAATTGAGGAGCTCTCCCG
CTTCTCAAATCTTCAATCTTTGCATTTGAATTGGCAATCAGCCTTCAACT
ACAACAGCGATAAGACTATTGCACATTCCATGACATCTCCTGCCGAACAC
ACAGCGTCTTCCTTTACGCTTCAGGCTTCAACAAGCTCGAATCTGAGCGC
ATTGGACGGACTCGGCTGGTCTCGTCCTCCTCCCGCAACGGCTTCTTTAG
CCAAATTATGGACGGTCTGGCATCGTCCTGGAACATGTTCAGACAAACCT
CTCTTGGCAGGTGTGGCGGGTCTTCCAGAATGTGATGAGGCTGGTCCATT
TTTGCTGGCTGACAAATCTTTACGACAGGAGGAAGAAGTTTGCAACCTCA
TTCTGCGAGCTCTAGAAAAAAATCCTGTTCGCCACAGCAGCTCTGCTACC
CAATACGAAGCAGACGGAGAAGAGAAAGTAGAACGTGTCTCCTGGGTCAA
CAATCACGGCCATGATCTCCTCCCCAAATCCAGCAAAGGCTTGCCCCGGC
CCCTCATGCATCGACTGAACGTGTTGCACAAGGGGGCGGGCATACTTGTG
CGGGACGCGCAAAGCAGGGTGTTCGTGCATCAACGATCCGCACACAAGCG
GATTTTCCCCTCTTTGTACGACATGTTCGTGGGCGGTGTGAGTTTATTCA
GGGAGGACACCAAGACGACTGCCAGGCGGGAACTGCAGGAGGAACTAGGA
TTTGGTCCCGCAGCTTCTGCGGCGGAGGAGGAGTCAACAGACTTTCGATT
TTTGTTTGATATCCTTGTGGAGACATCTTACAATCGGTGTTTCGTTGATG
TGTACGAGTACGTCGTTGAAGGAGGACAAGAGGAGAGCGCAAAGCTGGAC
CCAGAAGAGGTTCAGTGGGGGGACTGGATACCGATGGAGGAGGTGACACG
GCGCGTCCTATTGAACGGACTGTCGGGGGAGTGGACATTTGTTCCGGACG
GCTTGCTTGTCTGGGCGGCATTTTTGCGCGCCACGGATGCAGGTAGTGCG
AATTTGTCAATTGAAGGATCGGTATGAAGTCTGCGATATAGAGACAGGGC
TTTTACGGCACGTGCATGGAAACATAACCTTTTGAAACTTTTTGAGCAAT
CAGATATCTGTATTCTTCTTCAACGACATGTATGTAGTGATCAAGGAAGA
GCAAATGTTGTTTTACAGGCATTATTTTGGGTT
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protein sequence of rna2707

>rna2707-protein ID=rna2707-protein|Name=rna2707|organism=Nannochloropsis gaditana|type=polypeptide|length=400bp
MPAMASLPYKAHHPLQQQILNQYMQGSTPSTSSLPTLNAGLYTVQETSKL
PVNLPQHMRIPNHQAIPVPTPAIGLYHPMMATWNQHILAAGANQHFLWQF
PNMPMAAMLGVSHPRLMSQQIQMPQHALLKQEKRTQFAFAAAPSSNVAPP
KSTDAIEAPVKLAYPIGSMPEHVLMPPGQVNAQAWHMPKATLPFTFGNAL
SMNAQAPHFQPTSLTLQAPEIAGGNKGFVGAYSPNSRKRRIERFHEKRTK
RNWDPKKRKTTGVYMGRQDLDTMVRVRGRFTKKVARVEQQADRKEERAVT
LSLAGMTETEIKANKSKDMHLGMGMEKAGGSEVYWEKDADMEYSEEMDFS
DTLLDLSPVEMDQEYEPMFSKCLGVWSEGDNGPSANHMRTLPAMSFDIAL
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mRNA from alignment at CM002459.1:1011765..1012967-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2707 ID=rna2707|Name=rna2707|organism=Nannochloropsis gaditana|type=mRNA|length=1203bp|location=Sequence derived from alignment at CM002459.1:1011765..1012967- (Nannochloropsis gaditana)
ATGCCTGCAATGGCATCTTTGCCCTACAAAGCTCACCATCCTTTACAGCA
GCAGATTCTTAATCAGTACATGCAAGGCTCTACTCCCTCGACTTCGTCCC
TGCCAACACTGAACGCAGGGCTCTACACCGTACAAGAGACCTCCAAACTG
CCCGTGAACCTCCCGCAGCACATGCGCATTCCTAATCACCAAGCTATACC
CGTTCCTACGCCAGCCATAGGCCTCTATCACCCCATGATGGCTACGTGGA
ACCAGCACATTTTGGCTGCAGGAGCCAATCAGCACTTTTTGTGGCAATTT
CCCAACATGCCCATGGCTGCCATGCTTGGTGTGTCACACCCGCGGCTGAT
GAGCCAGCAAATTCAAATGCCACAGCACGCGCTTTTGAAGCAGGAAAAAA
GGACCCAATTTGCTTTTGCCGCAGCTCCATCTTCTAATGTTGCTCCTCCA
AAATCTACAGACGCTATAGAGGCACCGGTAAAGCTGGCCTACCCGATCGG
ATCCATGCCCGAGCACGTACTTATGCCGCCCGGGCAAGTTAACGCTCAAG
CCTGGCATATGCCCAAGGCCACGTTGCCTTTCACATTTGGTAATGCACTA
TCCATGAATGCTCAGGCGCCGCATTTCCAGCCAACCTCTCTGACGCTGCA
GGCCCCTGAGATTGCTGGTGGGAATAAGGGGTTTGTGGGGGCGTACAGTC
CTAATTCTAGGAAGAGGCGTATCGAACGCTTCCATGAGAAGAGGACCAAA
CGGAACTGGGATCCTAAGAAGAGGAAAACCACAGGCGTCTATATGGGTCG
TCAAGACCTGGATACCATGGTCCGTGTTCGCGGACGGTTCACCAAAAAAG
TGGCACGAGTTGAACAGCAGGCGGACAGGAAAGAGGAGAGGGCGGTCACA
CTCTCCTTAGCAGGCATGACTGAGACGGAAATCAAGGCCAACAAGTCGAA
AGATATGCACCTGGGAATGGGGATGGAAAAGGCCGGAGGATCGGAGGTCT
ACTGGGAGAAAGACGCCGACATGGAGTACAGCGAGGAGATGGACTTTTCC
GACACTTTACTCGACCTTTCACCGGTCGAGATGGATCAAGAATACGAACC
CATGTTTTCAAAATGCTTGGGGGTGTGGTCGGAGGGAGACAATGGTCCGT
CAGCCAATCACATGCGTACCTTGCCAGCGATGTCATTTGACATAGCCCTT
TGA
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Coding sequence (CDS) from alignment at CM002459.1:1011765..1012967-

>rna2707 ID=rna2707|Name=rna2707|organism=Nannochloropsis gaditana|type=CDS|length=1203bp|location=Sequence derived from alignment at CM002459.1:1011765..1012967- (Nannochloropsis gaditana)
ATGCCTGCAATGGCATCTTTGCCCTACAAAGCTCACCATCCTTTACAGCA
GCAGATTCTTAATCAGTACATGCAAGGCTCTACTCCCTCGACTTCGTCCC
TGCCAACACTGAACGCAGGGCTCTACACCGTACAAGAGACCTCCAAACTG
CCCGTGAACCTCCCGCAGCACATGCGCATTCCTAATCACCAAGCTATACC
CGTTCCTACGCCAGCCATAGGCCTCTATCACCCCATGATGGCTACGTGGA
ACCAGCACATTTTGGCTGCAGGAGCCAATCAGCACTTTTTGTGGCAATTT
CCCAACATGCCCATGGCTGCCATGCTTGGTGTGTCACACCCGCGGCTGAT
GAGCCAGCAAATTCAAATGCCACAGCACGCGCTTTTGAAGCAGGAAAAAA
GGACCCAATTTGCTTTTGCCGCAGCTCCATCTTCTAATGTTGCTCCTCCA
AAATCTACAGACGCTATAGAGGCACCGGTAAAGCTGGCCTACCCGATCGG
ATCCATGCCCGAGCACGTACTTATGCCGCCCGGGCAAGTTAACGCTCAAG
CCTGGCATATGCCCAAGGCCACGTTGCCTTTCACATTTGGTAATGCACTA
TCCATGAATGCTCAGGCGCCGCATTTCCAGCCAACCTCTCTGACGCTGCA
GGCCCCTGAGATTGCTGGTGGGAATAAGGGGTTTGTGGGGGCGTACAGTC
CTAATTCTAGGAAGAGGCGTATCGAACGCTTCCATGAGAAGAGGACCAAA
CGGAACTGGGATCCTAAGAAGAGGAAAACCACAGGCGTCTATATGGGTCG
TCAAGACCTGGATACCATGGTCCGTGTTCGCGGACGGTTCACCAAAAAAG
TGGCACGAGTTGAACAGCAGGCGGACAGGAAAGAGGAGAGGGCGGTCACA
CTCTCCTTAGCAGGCATGACTGAGACGGAAATCAAGGCCAACAAGTCGAA
AGATATGCACCTGGGAATGGGGATGGAAAAGGCCGGAGGATCGGAGGTCT
ACTGGGAGAAAGACGCCGACATGGAGTACAGCGAGGAGATGGACTTTTCC
GACACTTTACTCGACCTTTCACCGGTCGAGATGGATCAAGAATACGAACC
CATGTTTTCAAAATGCTTGGGGGTGTGGTCGGAGGGAGACAATGGTCCGT
CAGCCAATCACATGCGTACCTTGCCAGCGATGTCATTTGACATAGCCCTT
TGA
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Synonyms
Publications