|
|
Properties
| Property Name | Value |
|---|
| Product | ntp pyrophosphohydrolase |
| Orig transcript id | gnl|cribi|Naga_100008g78.7835.mrna |
| Orig protein id | gnl|cribi|Naga_100008g78.7835 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1009721..1011553 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2706 ID=rna2706|Name=rna2706|organism=Nannochloropsis gaditana|type=mRNA|length=2663bp
GCAACTAGGAGAGACTTGGCAATGGCAACCATACAAAATTTATCCCTACG
TGGAGTTTTGATACCATCTACATTACTTTGGAGGAGCAATAATGTCAGAC
TGATATATGCTAGCTGGCACTTAAAGTGGAGAGCGAATACTATCCCAGAG
CATGTTTGGCTTCCGGCATCAAGCCATTCCCGCAGATGCGCACCTTCCAA
CCAGTAGTGCTTCGTAGCCATACAAAGCAACGCGATCGGCGCATTTTGCC
ACCACTTACATAATGCTATGCACTTCCCCAACAATGCTGAATCGCTCTCA
AAGAAAGAAACTGGACCAAATCCATTCGCCTCTGAAGTTTCATCGAGGAC
TCCCACGCTGGGAGACAGGCAGGCAACTGCATGGTCGGCATTTTCCTCGT
CATCACTATGGAGATATCACCGGAATGTTTGAATTTTTGAGGCTCGCGGA
GGCGGAAACCGGTCATGCAATGGCAACACGGGTGAAGGTGATATGTAACC
AATTTGACCCGCAGCATCTTTCCGTGCCACGCGCGAATGGCCAAGCCTTT
CCAACAGGGTCACAATAGTTTCAAGTTTACTGTCTAGATGCCGACAAGTC
CGCATGTCTCACATTATTCCATTTTTTCTCATTCAGCATAGAACGGGGCA
AGCCGGGGGCGCATATTCTTGCATTTTAGGGCGAGACACGATCCCGCTCA
TGCTGGAAAGACAAGGAAAGACTATGAAACTAGACGATACCTTACTTAAA
ATACGACGCGCAGATTCAGAGGAGTTCACCAAGAATGAGCGCCCTGAGCA
CTCCATTGAACGAAGCCTTTCTAATCTTTCCTTGCGGGACAACGATTTCA
AGCGCCCATTAAATAAGTTCCAGAACTCGGATCTTCACCACACATATTTT
CTTCAACGCACCAAGACCTTACAAGCTGCGGGGAAGCCAGAATATGCCCA
GGCAGCAGCCATGCAAGCATTCCTTCTCCTACCAGATGCGCCCGAGGCAC
GAGCCAAAGTACTGTCCTTGACTCGCGAGATAAGCCTGACAGACTTTGGT
GTCGGACCGAGTGCGAACCAACTCACAACGGAAGGAGCTGGTCTCTTCAT
TGATTGGGGCCAGGACGAGGCTCCTGAGCACTGGTACCGAAAAGGGACAG
GTGAAATGATGGAAAAGTCACTACCCTACACGGCCTTACATGCCTTGGAA
TTGGCCATCCATGCGCAACACCTCCCCACTACGATACTGCAGAAAAAGGC
ACGTCTATGCATTCACCTGGCAGGGGCGTCGTCGGAATTGGAGGGGCTGG
CTGATTTTTCTGTGATATTTGAGAAGCTCCCGCATCTCGAAGAACTCGAA
GTGGTGCAAGTAGGATGGATGGGAGTGCCAGGTCCTTGCAAACGAACCCT
GCCTGACCCGCAAGCTCCACCTTCAGGATTGATCGTCGGCGAGACGAAAA
TGCTGGGGGGCGGCTGCCGACTACGGATTAGGCGCTACAAAGGGCTGTAC
CATGATTTCCTATCGAAGGCCTTTCGGCACCACTTTGATGGGCAAGGCTA
CTTGCACGAGGCACCTGATCTGGTGCTCATGGCGAATCCAAGCCTGGACG
CGTACTTTGACTCCTGGGCCCCGACGTTGGCGTGTCTGCGGGACGCTGGC
TATTTCACGGTAGTCACCGGGGGCAACCTGGACCACTCTCGCGAACACCA
CAACCCGATCTTGCAGGCCATGGGTGTGAGGATGGCCTTGCATTTGCGTA
CGTCGCGTTTTGGGATTGTGCACGGGCGTCGAGCCTGCAAAAATCATCAC
TTGTGTGCCTTTTTGGGCCCTGCCCCCTTCCTGCCGGAGAATTTGCGTCA
TCCTTCCTCCGATCAGGAATGGAGGGCGGTTCGGCATCTCCTGCGACACA
TAGGCGTGGATACGGGGGCCCGTGGGGAAATGCAGGCCCGTCTAGCTTTG
CTCAAGCAGCAAGTCGCAGTCATTTCTGTGGCGCAGACGGCCTTAGCGGC
GTCGAGAAGGCTAGGGCTGGGATATGAAGGTGAAATTTTGCCAAAGAGGA
ACGGAAGCATTGCCGGCTCGATTTCTGTTGAAAACGAGACCTGCAATGCA
TTCAAGAAAGTAAAACTTCACGACGAGAAGGAAAGGCCCTTTCCGGTTAA
GGACGAGGACTCTGGAGAGGGAGAGGAGGAGGCTGCCAACACTTGTCCCA
AGACGCCTGTGCAAACTACACCCACGCACAAAGAGGAGGAAACCGATGTG
TGGGGTGCAGCCATCACTCACAGTTGTGACAGCATCAAAACTCCGACCAG
AGTCACAACGCAGTCGCCTGGGTGGTCTTGCAGAAGCTTTCGCAAGGGCC
AGAATGGGATATACCGTGTGAAAGATTCCTGAGGCTATTGAATGACTGAT
GACAATTCGGGACCGGGGGCAAGGGTGTGAGAGATGCGTTTTCGAAACAC
ACATACAACTTACACGGCTGAAAGAGCCGCGAGACAAAACGAGATTAAAA
CTGCTTTCCCGCCATGGTTTATGTGAAAAGAGGTAAAAGACGGTAAAGAC
ACCATAAGTTACGAGCTAAGGGCTCCCGAGGGCCGTCGACTGGTCAGACA
GGCGGCTCAGCCATGTGAGTATGTACGAAGCACGAACCAAAAGTAGGAAT
TGAGCCTGCCTGA back to topprotein sequence of rna2706 >rna2706-protein ID=rna2706-protein|Name=rna2706|organism=Nannochloropsis gaditana|type=polypeptide|length=475bp
MATKHYWLEGAHLREWLDAGSQTCSGIVFALHFKCQLAYISLTLLLLQSN
VDGIKTPRRDKFCMVAIAKSLLVAELATRSGGCFLTPSRATTMPRLRPES
AKLSTKAVSPSSSFSSTSSAYTWIAAYKIEELSRFSNLQSLHLNWQSAFN
YNSDKTIAHSMTSPAEHTASSFTLQASTSSNLSALDGLGWSRPPPATASL
AKLWTVWHRPGTCSDKPLLAGVAGLPECDEAGPFLLADKSLRQEEEVCNL
ILRALEKNPVRHSSSATQYEADGEEKVERVSWVNNHGHDLLPKSSKGLPR
PLMHRLNVLHKGAGILVRDAQSRVFVHQRSAHKRIFPSLYDMFVGGVSLF
REDTKTTARRELQEELGFGPAASAAEEESTDFRFLFDILVETSYNRCFVD
VYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLLNGLSGEWTFVPD
GLLVWAAFLRATDAGSANLSIEGSV back to topmRNA from alignment at CM002459.1:1009721..1011553+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2706 ID=rna2706|Name=rna2706|organism=Nannochloropsis gaditana|type=mRNA|length=1833bp|location=Sequence derived from alignment at CM002459.1:1009721..1011553+ (Nannochloropsis gaditana)
TTGCATGACCGGTTTCCGCCTCCGCGAGCCTCAAAAATTCAAACATTCCG
GTGATATCTCCATAGtgatgacgaggaaaatgCCGACCATGCAGTTGCCT
GCCTGTCTCCCAGCGTGGGAGTCCTCGATGAAACTTCAGAGGCGAATGGA
TTTGGTCCAGTTTCTTTCTTTGAGAGCGATTCAGCATTGTTGGGGAAGTG
CATAGCATTATGTAAGTGGTGGCAAAATGCGCCGATCGCGTTGCTTTGTA
TGGCTACGAAGCACTACTGGTTGGAAGGTGCGCATCTGCGGGAATGGCTT
GATGCCGGAAGCCAAACATGCTCTGGGATAGTATTCGCTCTCCACTTTAA
GTGCCAGCTAGCATATATCAGTCTGACATTATTGCTCCTCCAAAGTAATG
TAGATGGTATCAAAACTCCACGTAGGGATAAATTTTGTATGGTTGCCATT
GCCAAGTCTCTCCTAGTTGCGGAGCTCGCTACTCGGTCGGGAGGGTGCTT
TTTAACGCCTTCGCGCGCAACGACAATGCCCCGTTTGCGCCCAGAAAGTG
CGAAATTGAGCACGAAGGCTGtttcaccctcctcgtctttttcctccacc
tcatctGCCTACACTTGGATTGCTGCCTACAAAATTGAGGAGCTCTCCCG
CTTCTCAAATCTTCAATCTTTGCATTTGAATTGGCAATCAGCCTTCAACT
ACAACAGCGATAAGACTATTGCACATTCCATGACATCTCCTGCCGAACAC
ACAGCGTCTTCCTTTACGCTTCAGGCTTCAACAAGCTCGAATCTGAGCGC
ATTGGACGGACTCGGCtggtctcgtcctcctcccgcaacgGCTTCTTTAG
CCAAATTATGGACGGTCTGGCATCGTCCTGGAACATGTTCAGACAAACCT
CTCTTGGCAGGTGTGGCGGGTCTTCCAGAATGTGATGAGGCTGGTCCATT
TTTGCTGGCTGACAAATCTTTacgacaggaggaagaagtttGCAACCTCA
TTCTGCGAGCTCTAGAAAAAAATCCTGTTCGCCACAGCAGCTCTGCTACC
CAATACGAAGCAgacggagaagagaaagtagAACGTGTCTCCTGGGTCAA
CAATCACGGCCATGATCTCCTCCCCAAATCCAGCAAAGGCTTGCCCCGGC
CCCTCATGCATCGACTGAACGTGTTGCACAAGGGGGCGGGCATACTTGTG
CGGGACGCGCAAAGCAGGGTGTTCGTGCATCAACGATCCGCACACAAGCG
gattttcccctctttgtACGACATGTTCGTGGGCGGTGTGAGTTTATTCA
GGGAGGACACCAAGACGACTGCCAGGCGGGAACTGCAGGAGGAACTAGGA
TTTGGTCCCGCAGCTTctgcggcggaggaggagtcaaCAGACTTTCGATT
TTTGTTTGATATCCTTGTGGAGACATCTTACAATCGGTGTTTCGTTGATG
TGTACGAGTACGTcgttgaaggaggacaagaggagaGCGCAAAGCTGGAC
CCAGAAGAGGTTCAGTGGGGGGACTGGATaccgatggaggaggtgacacG
GCGCGTCCTATTGAACGGACTGTCGGGGGAGTGGACATTTGTTCCGGACG
GCTTGCTTGTCTGGGCGGCATTTTTGCGCGCCACGGATGCAGGTAGTGCG
AATTTGTCAATTGAAGGATCGGTATGAAGTCTGCGATATAGAGACAGGGC
TTTTACGGCACGTGCATGGAAACATAACCTTTTGAAACTTTTTGAGCAAT
CAGATATCTGTATTCTTCTTCAACGACATGTATGTAGTGATCAAGGAAGA
GCAAATGTTGTTTTACAGGCATTATTTTGGGTT back to topCoding sequence (CDS) from alignment at CM002459.1:1009721..1011553+ >rna2706 ID=rna2706|Name=rna2706|organism=Nannochloropsis gaditana|type=CDS|length=1428bp|location=Sequence derived from alignment at CM002459.1:1009721..1011553+ (Nannochloropsis gaditana)
ATGGCTACGAAGCACTACTGGTTGGAAGGTGCGCATCTGCGGGAATGGCT
TGATGCCGGAAGCCAAACATGCTCTGGGATAGTATTCGCTCTCCACTTTA
AGTGCCAGCTAGCATATATCAGTCTGACATTATTGCTCCTCCAAAGTAAT
GTAGATGGTATCAAAACTCCACGTAGGGATAAATTTTGTATGGTTGCCAT
TGCCAAGTCTCTCCTAGTTGCGGAGCTCGCTACTCGGTCGGGAGGGTGCT
TTTTAACGCCTTCGCGCGCAACGACAATGCCCCGTTTGCGCCCAGAAAGT
GCGAAATTGAGCACGAAGGCTGtttcaccctcctcgtctttttcctccac
ctcatctGCCTACACTTGGATTGCTGCCTACAAAATTGAGGAGCTCTCCC
GCTTCTCAAATCTTCAATCTTTGCATTTGAATTGGCAATCAGCCTTCAAC
TACAACAGCGATAAGACTATTGCACATTCCATGACATCTCCTGCCGAACA
CACAGCGTCTTCCTTTACGCTTCAGGCTTCAACAAGCTCGAATCTGAGCG
CATTGGACGGACTCGGCtggtctcgtcctcctcccgcaacgGCTTCTTTA
GCCAAATTATGGACGGTCTGGCATCGTCCTGGAACATGTTCAGACAAACC
TCTCTTGGCAGGTGTGGCGGGTCTTCCAGAATGTGATGAGGCTGGTCCAT
TTTTGCTGGCTGACAAATCTTTacgacaggaggaagaagtttGCAACCTC
ATTCTGCGAGCTCTAGAAAAAAATCCTGTTCGCCACAGCAGCTCTGCTAC
CCAATACGAAGCAgacggagaagagaaagtagAACGTGTCTCCTGGGTCA
ACAATCACGGCCATGATCTCCTCCCCAAATCCAGCAAAGGCTTGCCCCGG
CCCCTCATGCATCGACTGAACGTGTTGCACAAGGGGGCGGGCATACTTGT
GCGGGACGCGCAAAGCAGGGTGTTCGTGCATCAACGATCCGCACACAAGC
GgattttcccctctttgtACGACATGTTCGTGGGCGGTGTGAGTTTATTC
AGGGAGGACACCAAGACGACTGCCAGGCGGGAACTGCAGGAGGAACTAGG
ATTTGGTCCCGCAGCTTctgcggcggaggaggagtcaaCAGACTTTCGAT
TTTTGTTTGATATCCTTGTGGAGACATCTTACAATCGGTGTTTCGTTGAT
GTGTACGAGTACGTcgttgaaggaggacaagaggagaGCGCAAAGCTGGA
CCCAGAAGAGGTTCAGTGGGGGGACTGGATaccgatggaggaggtgacac
GGCGCGTCCTATTGAACGGACTGTCGGGGGAGTGGACATTTGTTCCGGAC
GGCTTGCTTGTCTGGGCGGCATTTTTGCGCGCCACGGATGCAGGTAGTGC
GAATTTGTCAATTGAAGGATCGGTATGA back to top
|