EWM27943.1, cds2698 (CDS) Nannochloropsis gaditana

Overview
NameEWM27943.1
Unique Namecds2698
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1009970..1011397 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27943.1
Productntp pyrophosphohydrolase
Orig transcript idgnl|cribi|Naga_100008g78.7835.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1009970..1011397 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR020084NUDIX_hydrolase_CS
IPR015797NUDIX_hydrolase_dom-like
IPR000086NUDIX_hydrolase_dom
Homology
BLAST of EWM27943.1 vs. NCBI_GenBank
Match: gi|585110284|gb|EWM27943.1| (ntp pyrophosphohydrolase [Nannochloropsis gaditana])

HSP 1 Score: 978.778 bits (2529), Expect = 0.000e+0
Identity = 475/475 (100.00%), Postives = 475/475 (100.00%), Query Frame = 0
Query:    1 MATKHYWLEGAHLREWLDAGSQTCSGIVFALHFKCQLAYISLTLLLLQSNVDGIKTPRRDKFCMVAIAKSLLVAELATRSGGCFLTPSRATTMPRLRPESAKLSTKAVSPSSSFSSTSSAYTWIAAYKIEELSRFSNLQSLHLNWQSAFNYNSDKTIAHSMTSPAEHTASSFTLQASTSSNLSALDGLGWSRPPPATASLAKLWTVWHRPGTCSDKPLLAGVAGLPECDEAGPFLLADKSLRQEEEVCNLILRALEKNPVRHSSSATQYEADGEEKVERVSWVNNHGHDLLPKSSKGLPRPLMHRLNVLHKGAGILVRDAQSRVFVHQRSAHKRIFPSLYDMFVGGVSLFREDTKTTARRELQEELGFGPAASAAEEESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLLNGLSGEWTFVPDGLLVWAAFLRATDAGSANLSIEGSV 475
            MATKHYWLEGAHLREWLDAGSQTCSGIVFALHFKCQLAYISLTLLLLQSNVDGIKTPRRDKFCMVAIAKSLLVAELATRSGGCFLTPSRATTMPRLRPESAKLSTKAVSPSSSFSSTSSAYTWIAAYKIEELSRFSNLQSLHLNWQSAFNYNSDKTIAHSMTSPAEHTASSFTLQASTSSNLSALDGLGWSRPPPATASLAKLWTVWHRPGTCSDKPLLAGVAGLPECDEAGPFLLADKSLRQEEEVCNLILRALEKNPVRHSSSATQYEADGEEKVERVSWVNNHGHDLLPKSSKGLPRPLMHRLNVLHKGAGILVRDAQSRVFVHQRSAHKRIFPSLYDMFVGGVSLFREDTKTTARRELQEELGFGPAASAAEEESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLLNGLSGEWTFVPDGLLVWAAFLRATDAGSANLSIEGSV
Sbjct:    1 MATKHYWLEGAHLREWLDAGSQTCSGIVFALHFKCQLAYISLTLLLLQSNVDGIKTPRRDKFCMVAIAKSLLVAELATRSGGCFLTPSRATTMPRLRPESAKLSTKAVSPSSSFSSTSSAYTWIAAYKIEELSRFSNLQSLHLNWQSAFNYNSDKTIAHSMTSPAEHTASSFTLQASTSSNLSALDGLGWSRPPPATASLAKLWTVWHRPGTCSDKPLLAGVAGLPECDEAGPFLLADKSLRQEEEVCNLILRALEKNPVRHSSSATQYEADGEEKVERVSWVNNHGHDLLPKSSKGLPRPLMHRLNVLHKGAGILVRDAQSRVFVHQRSAHKRIFPSLYDMFVGGVSLFREDTKTTARRELQEELGFGPAASAAEEESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLLNGLSGEWTFVPDGLLVWAAFLRATDAGSANLSIEGSV 475          
BLAST of EWM27943.1 vs. NCBI_GenBank
Match: gi|553183539|ref|XP_005853918.1| (ntp pyrophosphohydrolase [Nannochloropsis gaditana CCMP526] >gi|422295146|gb|EKU22445.1| ntp pyrophosphohydrolase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 275.018 bits (702), Expect = 2.149e-88
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0
Query:  342 MFVGGVSLFREDTKTTARRELQEELGFGPAASAAEEESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLLNGLSGEWTFVPDGLLVWAAFLRATDAGSANLSIEGSV 475
            MFVGGVSLFREDTKTTARRELQEELGFGPAASAA+EESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLLNGLSGEWTFVPDGLLVWAAFLRATDAGSANLSIEGSV
Sbjct:    1 MFVGGVSLFREDTKTTARRELQEELGFGPAASAAQEESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLLNGLSGEWTFVPDGLLVWAAFLRATDAGSANLSIEGSV 134          
BLAST of EWM27943.1 vs. NCBI_GenBank
Match: gi|299117246|emb|CBN75208.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 172.17 bits (435), Expect = 1.735e-45
Identity = 91/198 (45.96%), Postives = 125/198 (63.13%), Query Frame = 0
Query:  271 ADGEEKVERVSWVNNHGHDLLPKSSKGLPRPLMHRLNVLHKGAGILVRDAQSRVFVHQRSAHKRIFPSLYDMFVGGVSLFREDTKTTARRELQEELGFGP---AASAAEEESTD------FRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLLNGLSGEWTFVPDGLLVWAAFL 459
            A+ EE+ E V WV+  G  +       LPRP++H  NVLH+GAG+++RDA+  V+ H+R++ KR+FPS+YDMF+GGVS   E   TTA REL EELG GP   + S+ E +  D       R+  + LV+T +NRCFV V++Y V  G  E+ K   +EV+WG ++P EEV  +V      GEW FVPDGL VW  +L
Sbjct:  179 ANEEEEGELVDWVDTRGRVIC-----ALPRPVVHSNNVLHRGAGVMIRDAKGEVYCHRRTSTKRVFPSMYDMFIGGVSGTMEPPLTTALRELGEELGLGPYGNSGSSPENQGDDGLKTTSMRYRGECLVQTGHNRCFVSVFDYRVVAG--ETVKWQEDEVEWGSYVPWEEVVSKV----SEGEWEFVPDGLQVWQHYL 365          
BLAST of EWM27943.1 vs. NCBI_GenBank
Match: gi|1210521857|dbj|GAX19292.1| (hypothetical protein FisN_4Lh132 [Fistulifera solaris])

HSP 1 Score: 124.79 bits (312), Expect = 4.644e-28
Identity = 78/207 (37.68%), Postives = 104/207 (50.24%), Query Frame = 0
Query:  298 LPRPLMHRLNVLHKGAGILV-------RDAQSRVFVHQRSAHKRIFPSLYDMFVGGVSLFREDTKTTARRELQEELGFGPAASAAEEESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEV----TRRVLLNGLSGE---------------------------------WTFVPDGLLVWAAFLR 460
            +PR L+H+ N+LH+G GI V        + +  ++ H+R+  KRIFPSLYDMFVGGVSL  ED   TARRE++EELG         +       L   +V T+YNRC VD++ YV+   +EES K   EEV WG ++P + +     R +      GE                                 W FVPDGLLVW A+LR
Sbjct:  168 VPRKLVHQHNILHRGIGIFVTKDHPIQENQRPDLYTHRRTETKRIFPSLYDMFVGGVSLAGEDAIITARREVEEELGLSCGDHLRPQR------LLQCVVCTAYNRCVVDLFVYVM-NTKEESIKWQDEEVAWGSFVPYKTIEAAADRSIHRLAERGEWPGRYPPIQSSRMGKLDPEDEGIRFEGATEWTSWDFVPDGLLVWEAWLR 367          
BLAST of EWM27943.1 vs. NCBI_GenBank
Match: gi|1210530486|dbj|GAX10917.1| (hypothetical protein FisN_4Hh132 [Fistulifera solaris])

HSP 1 Score: 122.479 bits (306), Expect = 8.315e-27
Identity = 77/207 (37.20%), Postives = 104/207 (50.24%), Query Frame = 0
Query:  298 LPRPLMHRLNVLHKGAGILVR-------DAQSRVFVHQRSAHKRIFPSLYDMFVGGVSLFREDTKTTARRELQEELGFGPAASAAEEESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEV----TRRVLLNGLSGE---------------------------------WTFVPDGLLVWAAFLR 460
            +PR L+H+ N+LH+G GI V        + +  ++ H+R+  KRIFPSLYDMFVGGVSL  ED   TA+RE++EELG         E       L   +V T+YNRC VD++ Y++   +EES K   EEV WG ++P + +     R +      GE                                 W FVPDGLLVW A+LR
Sbjct:  230 VPRKLVHQHNILHRGIGIFVTKDDPMEGNQRPDLYTHRRTETKRIFPSLYDMFVGGVSLAGEDAFITAQREVEEELGLSCRDHLRPER------LLQCVVCTAYNRCVVDLFVYLM-NTKEESIKWQDEEVAWGSFVPYKTIEAAADRSIHRLAERGEWPGRYPPIQSSRMGKLDPEDETIRFEGAMEWTSWDFVPDGLLVWEAWLR 429          
BLAST of EWM27943.1 vs. NCBI_GenBank
Match: gi|219117081|ref|XP_002179335.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409226|gb|EEC49158.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 118.627 bits (296), Expect = 2.324e-25
Identity = 76/215 (35.35%), Postives = 101/215 (46.98%), Query Frame = 0
Query:  298 LPRPLMHRLNVLHKGAGILV-RDA------------------QSRVFVHQRSAHKRIFPSLYDMFVGGVSLFREDTKTTARRELQEELGFGPAASAAEEESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLL----------------------NGLSGE-----------WTFVPDGLLVWAAFLR 460
            +PR L+H  N+LH+G G+ + RD                   Q  ++ H+R++ KRIFP LYDMFVGGV+L  ED++ TA RE+ EELG        E        +   +V T YNRC VD+Y YV+     E      EEV WGD++P   V   V L                      NG+  +           W +VPDGLLVW A+LR
Sbjct:  240 VPRNLVHEYNLLHRGVGVFITRDVPLQLPIHGARNSSPSPTHQPDLYCHRRTSTKRIFPDLYDMFVGGVALAGEDSRRTALREVGEELGLAQGNIGDEA-------ILTCVVCTGYNRCVVDLYCYVM-NTMAERVSWQAEEVAWGDFVPFNAVQASVDLSIQRLVSDGSWPGRYPPIQSSYNGVFPKDEFSSIRNWDSWDYVPDGLLVWEAWLR 446          
BLAST of EWM27943.1 vs. NCBI_GenBank
Match: gi|397576015|gb|EJK50018.1| (hypothetical protein THAOC_31056 [Thalassiosira oceanica])

HSP 1 Score: 115.931 bits (289), Expect = 1.389e-24
Identity = 82/232 (35.34%), Postives = 112/232 (48.28%), Query Frame = 0
Query:  277 VERVSWVNNHGHDLLPKSSKGLPRPLMHRLNVLHKGAGILVRDAQS-----------RVFVHQRSAHKRIFPSLYDMFVGGVSLFREDTKTTARRELQEELGFGPAASAAEE----ESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEV-------TRRVLLNGL-SGE---------------------------WTFVPDGLLVWAAF 458
            VE V  V + G  L       +PR L+H+ N+LH+G G+++    +           +V+ HQR+  KR+FPSLYDMFVGGVS   E ++ TA RE+ EELG   A +  EE    ES   + LF   + TSYNRC V  + Y  +    ES     EEVQWG ++P + V         R++ +G   GE                           W +VPDGLLVW A+
Sbjct:  196 VELVDMVCSDGQVL-----GSVPRNLVHKYNLLHRGIGMIISKDDNIFETFRTGRLPQVYCHQRTDTKRVFPSLYDMFVGGVSASFERSRLTAAREVAEELGMKRALNLMEEGLDDESPLSQELFQCTIATSYNRCVVSFFTYTCDTSV-ESLAWQEEEVQWGQFVPYDIVEESADLSIERLVNDGAWPGEKVILDYEPTIMSLKERYSEEKYEGWERWDYVPDGLLVWQAW 421          
BLAST of EWM27943.1 vs. NCBI_GenBank
Match: gi|1064062050|gb|ODT64692.1| (hypothetical protein ABS71_12840 [bacterium SCN 62-11])

HSP 1 Score: 100.138 bits (248), Expect = 3.612e-21
Identity = 68/174 (39.08%), Postives = 99/174 (56.90%), Query Frame = 0
Query:  289 DLLPKSSKGLPRPLMHRL---NVLHKGAGILVRDAQSRVFVHQRSAHKRIFPSLYDMFVGGVSLFREDTKTTARRELQEELGFGPAASAAEEESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLLNGLSGEWTFVPDGLLVWAAFL 459
            DL+ + ++ + R L   +   N+LH+G  +LVR++Q +V+VHQR+A K +FP+LYDMFVGGV    ED    A+RE +EELG          ++ D  FLFD L +   N  +V  Y    +G         PEEVQWGDW+P +E+ + +       +   VPDGL V+ A+L
Sbjct:    8 DLVDRDNQVIGRALRSEVRSKNLLHRGIAVLVRNSQGQVYVHQRTATKDLFPALYDMFVGGVVGEGEDYLEAAQREAEEELGV---------QNKDLEFLFDHLYQGEKNYSWVRCYRVTWDG----PVFHQPEEVQWGDWLPEDELPQWI------QQVPIVPDGLDVFYAYL 162          
BLAST of EWM27943.1 vs. NCBI_GenBank
Match: gi|664249947|ref|WP_030781457.1| (NUDIX hydrolase [Streptomyces lavenduligriseus])

HSP 1 Score: 95.5153 bits (236), Expect = 1.679e-19
Identity = 67/168 (39.88%), Postives = 89/168 (52.98%), Query Frame = 0
Query:  299 PRPLMHRLNVLHKGAGILVRDAQSRVFVHQRSAHKRIFPSLYDMFVGGVSLFREDTKTTARRELQEELGFGPAASAAEEESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLLNGLSGEWTFVPDGLLVWAAFLRATDAGS 466
            PR   + L + H+   +  RDA  R+FVH+R+A K +FPSLYDMFVGGV    E     A RE +EELG     S     +  F+FL+D   + + N  +  VYE       +   +  PEEVQW  ++P EEV RR+      G W +VPDGL  +   LRA  AG 
Sbjct:   22 PRGEAYALGLRHRCVFVQARDAAGRLFVHRRTATKLVFPSLYDMFVGGVVGAGESYDDAALREAEEELG----VSGLPRPTLLFKFLYD---DGAGNSWWSAVYEVRC----DLPVRPQPEEVQWHAFLPEEEVERRL------GTWEWVPDGLAAYER-LRAFRAGG 171          
BLAST of EWM27943.1 vs. NCBI_GenBank
Match: gi|663201094|ref|WP_030238939.1| (NUDIX hydrolase [Streptomyces lavendulae])

HSP 1 Score: 93.5893 bits (231), Expect = 9.167e-19
Identity = 60/154 (38.96%), Postives = 81/154 (52.60%), Query Frame = 0
Query:  299 PRPLMHRLNVLHKGAGILVRDAQSRVFVHQRSAHKRIFPSLYDMFVGGVSLFREDTKTTARRELQEELGFGPAASAAEEESTDFRFLFDILVETSYNRCFVDVYEYVVEGGQEESAKLDPEEVQWGDWIPMEEVTRRVLLNGLSGEWTFVPDGL 452
            PR  ++   +LH+   +  RDA+ RVFVH+R+A K +FP+ YDMFVGGV    ED    A RE +EELG     S  E+ +  F+FL++      ++        YV E   E        EV W  W+P EE+ RRV      G W +VPDGL
Sbjct:   22 PRGEVYARGLLHRCVFVQARDARGRVFVHRRTASKLVFPAYYDMFVGGVLGAGEDYAGAALREAEEELG----VSGLEQPAPLFKFLYEGPGGAWWS--------YVHEVRCELPVTPQASEVDWHTWLPQEELDRRV----ADGSWPWVPDGL 159          
The following BLAST results are available for this feature:
BLAST of EWM27943.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110284|gb|EWM27943.1|0.000e+0100.00ntp pyrophosphohydrolase [Nannochloropsis gaditana... [more]
gi|553183539|ref|XP_005853918.1|2.149e-8899.25ntp pyrophosphohydrolase [Nannochloropsis gaditana... [more]
gi|299117246|emb|CBN75208.1|1.735e-4545.96conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210521857|dbj|GAX19292.1|4.644e-2837.68hypothetical protein FisN_4Lh132 [Fistulifera sola... [more]
gi|1210530486|dbj|GAX10917.1|8.315e-2737.20hypothetical protein FisN_4Hh132 [Fistulifera sola... [more]
gi|219117081|ref|XP_002179335.1|2.324e-2535.35predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397576015|gb|EJK50018.1|1.389e-2435.34hypothetical protein THAOC_31056 [Thalassiosira oc... [more]
gi|1064062050|gb|ODT64692.1|3.612e-2139.08hypothetical protein ABS71_12840 [bacterium SCN 62... [more]
gi|664249947|ref|WP_030781457.1|1.679e-1939.88NUDIX hydrolase [Streptomyces lavenduligriseus][more]
gi|663201094|ref|WP_030238939.1|9.167e-1938.96NUDIX hydrolase [Streptomyces lavendulae][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2706rna2706Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications