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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100008g77.7923.mrna |
| Orig protein id | gnl|cribi|Naga_100008g77.7923 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:1007151..1010190 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2705 ID=rna2705|Name=rna2705|organism=Nannochloropsis gaditana|type=mRNA|length=1906bp
CGTTGCCGTTACATTTCCTTCTTCCTTGAAGGCGGACTCGGACCACGCGG
CCGGGGATGGCCTATGCTGGTGGAGGAGGGCCATTTGGACGCAGACTTTC
GCTCTGACATTGTCGTATGAGAGGCAGGATGGTTTGCAAGGGTCCCAATC
GGCAAAGAATTCCTATACGGGAATTGTTTTCCCCTAGACTTTGCGAACCG
ATTCGATCTGCCGAAACCTTTTGAACCTTATTCCTTTTCTTCCATGCTCG
AGACAGACATCGTTACCACCAGGATCATGAATGTATTCAGCAATATAGTC
AATCGATTTGGCCGGGAGAGTCAGGATGGCGCCTTAACTCCCTCCACCAT
CCAGCGGACCGTTGTGGTAGTGACGGGTGCTACAGGCTATATTGCGAGCC
ACATCGTCAGGGTGTTGTTGGAAAATGGTTTCAAAGTTAGGGCAACGGTC
CGCGATCCCAGCAACAAGGCGCGTCTGAAGTTCCTCAGCGATCTTCCCGG
AGCGTCCGAGCGGTTGACTTTCCACAAAGCCGATTTACTGGCTCCCGGCT
CGTTCGACGAGGTATGCGCTGGCGCCACTTGCGTTATTCACACGGCCTCC
CCCGTGCCTCTGGAAATGCCTGATGACCCGAACGCAGCCGTGGTCGTTCC
CGCCGTAGAAGGTACAAAGAATGTGTTCGAGTCGATTCTCAAGGCAGGGA
GCATCAAGCGTGTGGTTCTGACCTCCTCCATCCGCGCCGTCTTTGGCTTT
GGGAACGAGAAACCTCCCGGATACGTGTACTCGGAGGAGGATTGGAACAC
GACATCCAGGCTGGAGAACAACCAGGCGTACAGCTTGAGCAAGACCCTGG
CCGAGAAGACAGCGTGGGAGTATGCCGAGAAGGCGGGGAAAGACGGGAAG
AAACCTGAATGGGACCTGGTAGCGATTCAGCCGGGCTTGGTCTTCGGCCC
ATCCCTGTCCGGGCGAGAGGACTCGATGAGCCTGACTCTGTTCAAAAACC
TAGTAACGGGCCATCAATCAGGCATGGTGAATCTGGCCTGGGGTGTGGTT
GACGTCCGAGATGTCGCCACCCTGCACGTGGCCGCCCTGACCAACACTCA
AGCCTCCGGGCGCTACATCGCCACAAGTGCCACGCTCTCCTTCCAAGAGA
TCATTGACACGGTTCGCGCCAAAATTAACCGCCGTTTGCCCAGGTACGCG
GTGCCCAAGGCCTTCCTTTGGATTGGGTATTACTCAGGCTTGGCGGGGAA
GCAGCTCTCTTGGGAGGACATTGCTTACAACGTGGGAAATCCTGTACTCT
TCAGCAATGCAAAAGCTACGAAAGAATTGCTTCCAGAAGGCTTCATCGAG
CCAGCGAAAACGTTTGGAGACATGTACGATAATTTGACTGAGGTCGGCAT
CATTCCCGAGGGTAATTAAAATCATCATGTATGCCAGGAAAGAGAGGATT
TGTCCGTTGGCGTCGGGGCTCCTGATTCATAGCATGTGTGAAAATCATCT
ACAGTCCACGGACGCTGAAGCACTTAGATTACTAACACGTTAGAAGATGC
GCGCATAAAGCGGCAAAAAAATTGGACAAAAGAGGGCAGTACGCTGGAGA
ATGTTCATGGCCAATAGACGAGGCAAAAGCACCTTCTGAACACACGTAAT
CTATGAACTTCTACAAGTCCTGGTTCAGAATTGTTGTTTTTAAAACGTAC
GCAATTATTCGGTAGCCCATCAATAAATGATAGATAACGATGTGACAAGG
ATGAACGAGAGGTTAGGTTTCCAGTAAAAATATTCAGTAAGAAACGAGAT
GAAACGGCCGTGTGTGCAAAAGAAAGGAATTCATGCAAAGGAAAGAGTGG
CCAAGGCCCTAAAATTTTCAGGCAGGCTCAATTCCTACTTTTGGTTCGTG
CTTCGT back to topprotein sequence of rna2705 >rna2705-protein ID=rna2705-protein|Name=rna2705|organism=Nannochloropsis gaditana|type=polypeptide|length=592bp
MSHIIPFFLIQHRTGQAGGAYSCILGRDTIPLMLERQGKTMKLDDTLLKI
RRADSEEFTKNERPEHSIERSLSNLSLRDNDFKRPLNKFQNSDLHHTYFL
QRTKTLQAAGKPEYAQAAAMQAFLLLPDAPEARAKVLSLTREISLTDFGV
GPSANQLTTEGAGLFIDWGQDEAPEHWYRKGTGEMMEKSLPYTALHALEL
AIHAQHLPTTILQKKARLCIHLAGASSELEGLADFSVIFEKLPHLEELEV
VQVGWMGVPGPCKRTLPDPQAPPSGLIVGETKMLGGGCRLRIRRYKGLYH
DFLSKAFRHHFDGQGYLHEAPDLVLMANPSLDAYFDSWAPTLACLRDAGY
FTVVTGGNLDHSREHHNPILQAMGVRMALHLRTSRFGIVHGRRACKNHHL
CAFLGPAPFLPENLRHPSSDQEWRAVRHLLRHIGVDTGARGEMQARLALL
KQQVAVISVAQTALAASRRLGLGYEGEILPKRNGSIAGSISVENETCNAF
KKVKLHDEKERPFPVKDEDSGEGEEEAANTCPKTPVQTTPTHKEEETDVW
GAAITHSCDSIKTPTRVTTQSPGWSCRSFRKGQNGIYRVKDS back to topmRNA from alignment at CM002459.1:1007151..1010190- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2705 ID=rna2705|Name=rna2705|organism=Nannochloropsis gaditana|type=mRNA|length=3040bp|location=Sequence derived from alignment at CM002459.1:1007151..1010190- (Nannochloropsis gaditana)
GCAACTAGGAGAGACTTGGCAATGGCAACCATACAAAATTTATCCCTACG
TGGAGTTTTGATACCATCTACATTACTTTGGAGGAGCAATAATGTCAGAC
TGATATATGCTAGCTGGCACTTAAAGTGGAGAGCGAATACTATCCCAGAG
CATGTTTGGCTTCCGGCATCAAGCCATTCCCGCAGATGCGCACCTTCCAA
CCAGTAGTGCTTCGTAGCCATACAAAGCAACGCGATCGGCGCATTTTGCC
ACCACTTACATAATGCTATGCACTTCCCCAACAATGCTGAATCGCTCTCA
AAGAAAGAAACTGGACCAAATCCATTCGCCTCTGAAGTTTCATCGAGGAC
TCCCACGCTGGGAGACAGGCAGGCAACTGCATGGTCGGCATTTTCCTCGT
CATCACTATGGAGATATCACCGGAATGTTTGAATTTTTGAGGCTCGCGGA
GGCGGAAACCGGTCATGCAATGGCAACACGGGTGAAGGTGATATGTAACC
AATTTGACCCGCAGCATCTTTCCGTGCCACGCGCGAATGGCCAAGCCTTT
CCAACAGGGTCACAATAGTTTCAAGTTTACTGTCTAGATGCCGACAAGTC
CGCATGTCTCACATTATTCCATTTTTTCTCATTCAGCATAGAACGGGGCA
AGCCGGGGGCGCATATTCTTGCATTTTAGGGCGAGACACGATCCCGCTCA
TGCTGGAAAGACAAGGAAAGACTATGAAACTAGACGATACCTTACTTAAA
ATACGACGCGCAGATTCAGAGGAGTTCACCAAGAATGAGGTACGGAAAGA
GAAAGGGGGGGAGAACAGAGGAAAGTTGAAGAAGCATTTTCATGTGCTTT
CGGCCCCCTGTTTAAAGTCTCCTGGGAATGTACCACGGCGTAAAAAGACG
ATAATCTGTGAAAGATATGTATAGATTGTCCATAGACTGAAATACATAAG
GAGAATAGAGGACTTGAAACATGAAGGCCGTCACAATACGTACTTCCACC
GGGATCTCAAAGCGAAGTGCTCCCACTTGTACATGACTCGCACATATTCT
GTTCCTCTGTGTAATAAGTCCTGATTTACCCTGACTTGAGTAAAGAATCT
GATGGGAGTGCGAATCATTCATCTCACTGTCGGATTTCACATAAATAATA
CTTTTCTGACCACAAGCGCCCTGAGCACTCCATTGAACGAAGCCTTTCTA
ATCTTTCCTTGCGGGACAACGATTTCAAGCGCCCATTAAATAAGTTCCAG
AACTCGGATCTTCACCACACATATTTTCTTCAACGCACCAAGACCTTACA
AGCTGCGGGGAAGCCAGAATATGCCCAGGCAGCAGCCATGCAAGCATTCC
TTCTCCTACCAGATGCGCCCGAGGCACGAGCCAAAGTACTGTCCTTGACT
CGCGAGATAAGCCTGACAGACTTTGGTGTCGGACCGAGTGCGAACCAACT
CACAACGGAAGGAGCTGGTCTCTTCATTGATTGGGGCCAGGACGAGGCTC
CTGAGCACTGGTACCGAAAAGGGACAGGTGAAATGATGGAAAAGTCACTA
CCCTACACGGCCTTACATGCCTTGGAATTGGCCATCCATGCGCAACACCT
CCCCACTACGATACTGCAGAAAAAGGCACGTCTATGCATTCACCTGGCAG
GGGCGTCGTCGGAATTGGAGGGGCTGGCTGATTTTTCTGTGATATTTGAG
AAGCTCCCGCATCTCGAAGAACTCGAAGTGGTGCAAGTAGGATGGATGGG
AGTGCCAGGTCCTTGCAAACGAACCCTGCCTGACCCGCAAGCTCCACCTT
CAGGATTGATCGTCGGCGAGACGAAAATGCTGGGGGGCGGCTGCCGACTA
CGGATTAGGCGCTACAAAGGGCTGTACCATGATTTCCTATCGAAGGCCTT
TCGGCACCACTTTGATGGGCAAGGCTACTTGCACGAGGCACCTGATCTGG
TGCTCATGGCGAATCCAAGCCTGGACGCGTACTTTGACTCCTGGGCCCCG
ACGTTGGCGTGTCTGCGGGACGCTGGCTATTTCACGGTAGTCACCGGGGG
CAACCTGGACCACTCTCGCGAACACCACAACCCGATCTTGCAGGCCATGG
GTGTGAGGATGGCCTTGCATTTGCGTACGTCGCGTTTTGGGATTGTGCAC
GGGCGTCGAGCCTGCAAAAATCATCACTTGTGTGCCTTTTTGGGCCCTGC
CCCCTTCCTGCCGGAGAATTTGCGTCATCCTTCCTCCGATCAGGAATGGA
GGGCGGTTCGGCATCTCCTGCGACACATAGGCGTGGATACGGGGGCCCGT
GGGGAAATGCAGGCCCGTCTAGCTTTGCTCAAGCAGCAAGTCGCAGTCAT
TTCTGTGGCGCAGACGGCCTTAGCGGCGTCGAGAAGGCTAGGGCTGGGAT
ATGAAGGTGAAATTTTGCCAAAGAGGAACGGAAGCATTGCCGGCTCGATT
TCTGTTGAAAACGAGACCTGCAATGCATTCAAGAAAGTAAAACTTCACGA
CGAGAAGGAAAGGCCCTTTCCGGTTAAGGACGAGGACTCTGGAGAGGGAG
AGGAGGAGGCTGCCAACACTTGTCCCAAGACGCCTGTGCAAACTACACCC
ACGCACAAAGAGGAGGAAACCGATGTGTGGGGTGCAGCCATCACTCACAG
TTGTGACAGCATCAAAACTCCGACCAGAGTCACAACGCAGTCGCCTGGGT
GGTCTTGCAGAAGCTTTCGCAAGGGCCAGAATGGGATATACCGTGTGAAA
GATTCCTGAGGCTATTGAATGACTGATGACAATTCGGGACCGGGGGCAAG
GGTGTGAGAGATGCGTTTTCGAAACACACATACAACTTACACGGCTGAAA
GAGCCGCGAGACAAAACGAGATTAAAACTGCTTTCCCGCCATGGTTTATG
TGAAAAGAGGTAAAAGACGGTAAAGACACCATAAGTTACGAGCTAAGGGC
TCCCGAGGGCCGTCGACTGGTCAGACAGGCGGCTCAGCCATGTGAGTATG
TACGAAGCACGAACCAAAAGTAGGAATTGAGCCTGCCTGA back to topCoding sequence (CDS) from alignment at CM002459.1:1007151..1010190- >rna2705 ID=rna2705|Name=rna2705|organism=Nannochloropsis gaditana|type=CDS|length=3558bp|location=Sequence derived from alignment at CM002459.1:1007151..1010190- (Nannochloropsis gaditana)
CGCCCTGAGCACTCCATTGAACGAAGCCTTTCTAATCTTTCCTTGCGGGA
CAACGATTTCAAGCGCCCATTAAATAAGTTCCAGAACTCGGATCTTCACC
ACACATATTTTCTTCAACGCACCAAGACCTTACAAGCTGCGGGGAAGCCA
GAATATGCCCAGGCAGCAGCCATGCAAGCATTCCTTCTCCTACCAGATGC
GCCCGAGGCACGAGCCAAAGTACTGTCCTTGACTCGCGAGATAAGCCTGA
CAGACTTTGGTGTCGGACCGAGTGCGAACCAACTCACAACGGAAGGAGCT
GGTCTCTTCATTGATTGGGGCCAGGACGAGGCTCCTGAGCACTGGTACCG
AAAAGGGACAGGTGAAATGATGGAAAAGTCACTACCCTACACGGCCTTAC
ATGCCTTGGAATTGGCCATCCATGCGCAACACCTCCCCACTACGATACTG
CAGAAAAAGGCACGTCTATGCATTCACCTGGCAGGGGCGTCGTCGGAATT
GGAGGGGCTGGCTGATTTTTCTGTGATATTTGAGAAGCTCCCGCATCTCG
AAGAACTCGAAGTGGTGCAAGTAGGATGGATGGGAGTGCCAGGTCCTTGC
AAACGAACCCTGCCTGACCCGCAAGCTCCACCTTCAGGATTGATCGTCGG
CGAGACGAAAATGCTGGGGGGCGGCTGCCGACTACGGATTAGGCGCTACA
AAGGGCTGTACCATGATTTCCTATCGAAGGCCTTTCGGCACCACTTTGAT
GGGCAAGGCTACTTGCACGAGGCACCTGATCTGGTGCTCATGGCGAATCC
AAGCCTGGACGCGTACTTTGACTCCTGGGCCCCGACGTTGGCGTGTCTGC
GGGACGCTGGCTATTTCACGGTAGTCACCGGGGGCAACCTGGACCACTCT
CGCGAACACCACAACCCGATCTTGCAGGCCATGGGTGTGAGGATGGCCTT
GCATTTGCGTACGTCGCGTTTTGGGATTGTGCACGGGCGTCGAGCCTGCA
AAAATCATCACTTGTGTGCCTTTTTGGGCCCTGCCCCCTTCCTGCCGGAG
AATTTGCGTCATCCTTCCTCCGATCAGGAATGGAGGGCGGTTCGGCATCT
CCTGCGACACATAGGCGTGGATACGGGGGCCCGTGGGGAAATGCAGGCCC
GTCTAGCTTTGCTCAAGCAGCAAGTCGCAGTCATTTCTGTGGCGCAGACG
GCCTTAGCGGCGTCGAGAAGGCTAGGGCTGGGATATGAAGGTGAAATTTT
GCCAAAGAGGAACGGAAGCATTGCCGGCTCGATTTCTGTTGAAAACGAGA
CCTGCAATGCATTCAAGAAAGTAAAACTTCACGACGAGAAGGAAAGGCCC
TTTCCGGTTAAGGACGAGGACTCTGGAGAGGGAGAGGAGGAGGCTGCCAA
CACTTGTCCCAAGACGCCTGTGCAAACTACACCCACGCACAAAGAGGAGG
AAACCGATGTGTGGGGTGCAGCCATCACTCACAGTTGTGACAGCATCAAA
ACTCCGACCAGAGTCACAACGCAGTCGCCTGGGTGGTCTTGCAGAAGCTT
TCGCAAGGGCCAGAATGGGATATACCGTGTGAAAGATTCCTGAATGTCTC
ACATTATTCCATTTTTTCTCATTCAGCATAGAACGGGGCAAGCCGGGGGC
GCATATTCTTGCATTTTAGGGCGAGACACGATCCCGCTCATGCTGGAAAG
ACAAGGAAAGACTATGAAACTAGACGATACCTTACTTAAAATACGACGCG
CAGATTCAGAGGAGTTCACCAAGAATGAGCGCCCTGAGCACTCCATTGAA
CGAAGCCTTTCTAATCTTTCCTTGCGGGACAACGATTTCAAGCGCCCATT
AAATAAGTTCCAGAACTCGGATCTTCACCACACATATTTTCTTCAACGCA
CCAAGACCTTACAAGCTGCGGGGAAGCCAGAATATGCCCAGGCAGCAGCC
ATGCAAGCATTCCTTCTCCTACCAGATGCGCCCGAGGCACGAGCCAAAGT
ACTGTCCTTGACTCGCGAGATAAGCCTGACAGACTTTGGTGTCGGACCGA
GTGCGAACCAACTCACAACGGAAGGAGCTGGTCTCTTCATTGATTGGGGC
CAGGACGAGGCTCCTGAGCACTGGTACCGAAAAGGGACAGGTGAAATGAT
GGAAAAGTCACTACCCTACACGGCCTTACATGCCTTGGAATTGGCCATCC
ATGCGCAACACCTCCCCACTACGATACTGCAGAAAAAGGCACGTCTATGC
ATTCACCTGGCAGGGGCGTCGTCGGAATTGGAGGGGCTGGCTGATTTTTC
TGTGATATTTGAGAAGCTCCCGCATCTCGAAGAACTCGAAGTGGTGCAAG
TAGGATGGATGGGAGTGCCAGGTCCTTGCAAACGAACCCTGCCTGACCCG
CAAGCTCCACCTTCAGGATTGATCGTCGGCGAGACGAAAATGCTGGGGGG
CGGCTGCCGACTACGGATTAGGCGCTACAAAGGGCTGTACCATGATTTCC
TATCGAAGGCCTTTCGGCACCACTTTGATGGGCAAGGCTACTTGCACGAG
GCACCTGATCTGGTGCTCATGGCGAATCCAAGCCTGGACGCGTACTTTGA
CTCCTGGGCCCCGACGTTGGCGTGTCTGCGGGACGCTGGCTATTTCACGG
TAGTCACCGGGGGCAACCTGGACCACTCTCGCGAACACCACAACCCGATC
TTGCAGGCCATGGGTGTGAGGATGGCCTTGCATTTGCGTACGTCGCGTTT
TGGGATTGTGCACGGGCGTCGAGCCTGCAAAAATCATCACTTGTGTGCCT
TTTTGGGCCCTGCCCCCTTCCTGCCGGAGAATTTGCGTCATCCTTCCTCC
GATCAGGAATGGAGGGCGGTTCGGCATCTCCTGCGACACATAGGCGTGGA
TACGGGGGCCCGTGGGGAAATGCAGGCCCGTCTAGCTTTGCTCAAGCAGC
AAGTCGCAGTCATTTCTGTGGCGCAGACGGCCTTAGCGGCGTCGAGAAGG
CTAGGGCTGGGATATGAAGGTGAAATTTTGCCAAAGAGGAACGGAAGCAT
TGCCGGCTCGATTTCTGTTGAAAACGAGACCTGCAATGCATTCAAGAAAG
TAAAACTTCACGACGAGAAGGAAAGGCCCTTTCCGGTTAAGGACGAGGAC
TCTGGAGAGGGAGAGGAGGAGGCTGCCAACACTTGTCCCAAGACGCCTGT
GCAAACTACACCCACGCACAAAGAGGAGGAAACCGATGTGTGGGGTGCAG
CCATCACTCACAGTTGTGACAGCATCAAAACTCCGACCAGAGTCACAACG
CAGTCGCCTGGGTGGTCTTGCAGAAGCTTTCGCAAGGGCCAGAATGGGAT
ATACCGTGTGAAAGATTCCTGAATGTCTCACATTATTCCATTTTTTCTCA
TTCAGCATAGAACGGGGCAAGCCGGGGGCGCATATTCTTGCATTTTAGGG
CGAGACACGATCCCGCTCATGCTGGAAAGACAAGGAAAGACTATGAAACT
AGACGATACCTTACTTAAAATACGACGCGCAGATTCAGAGGAGTTCACCA
AGAATGAG back to top
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