EWM28031.1, cds2697 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28031.1 vs. NCBI_GenBank
Match: gi|585110372|gb|EWM28031.1| (hypothetical protein Naga_100008g77 [Nannochloropsis gaditana]) HSP 1 Score: 1230.7 bits (3183), Expect = 0.000e+0 Identity = 592/592 (100.00%), Postives = 592/592 (100.00%), Query Frame = 0
Query: 1 MSHIIPFFLIQHRTGQAGGAYSCILGRDTIPLMLERQGKTMKLDDTLLKIRRADSEEFTKNERPEHSIERSLSNLSLRDNDFKRPLNKFQNSDLHHTYFLQRTKTLQAAGKPEYAQAAAMQAFLLLPDAPEARAKVLSLTREISLTDFGVGPSANQLTTEGAGLFIDWGQDEAPEHWYRKGTGEMMEKSLPYTALHALELAIHAQHLPTTILQKKARLCIHLAGASSELEGLADFSVIFEKLPHLEELEVVQVGWMGVPGPCKRTLPDPQAPPSGLIVGETKMLGGGCRLRIRRYKGLYHDFLSKAFRHHFDGQGYLHEAPDLVLMANPSLDAYFDSWAPTLACLRDAGYFTVVTGGNLDHSREHHNPILQAMGVRMALHLRTSRFGIVHGRRACKNHHLCAFLGPAPFLPENLRHPSSDQEWRAVRHLLRHIGVDTGARGEMQARLALLKQQVAVISVAQTALAASRRLGLGYEGEILPKRNGSIAGSISVENETCNAFKKVKLHDEKERPFPVKDEDSGEGEEEAANTCPKTPVQTTPTHKEEETDVWGAAITHSCDSIKTPTRVTTQSPGWSCRSFRKGQNGIYRVKDS 592
MSHIIPFFLIQHRTGQAGGAYSCILGRDTIPLMLERQGKTMKLDDTLLKIRRADSEEFTKNERPEHSIERSLSNLSLRDNDFKRPLNKFQNSDLHHTYFLQRTKTLQAAGKPEYAQAAAMQAFLLLPDAPEARAKVLSLTREISLTDFGVGPSANQLTTEGAGLFIDWGQDEAPEHWYRKGTGEMMEKSLPYTALHALELAIHAQHLPTTILQKKARLCIHLAGASSELEGLADFSVIFEKLPHLEELEVVQVGWMGVPGPCKRTLPDPQAPPSGLIVGETKMLGGGCRLRIRRYKGLYHDFLSKAFRHHFDGQGYLHEAPDLVLMANPSLDAYFDSWAPTLACLRDAGYFTVVTGGNLDHSREHHNPILQAMGVRMALHLRTSRFGIVHGRRACKNHHLCAFLGPAPFLPENLRHPSSDQEWRAVRHLLRHIGVDTGARGEMQARLALLKQQVAVISVAQTALAASRRLGLGYEGEILPKRNGSIAGSISVENETCNAFKKVKLHDEKERPFPVKDEDSGEGEEEAANTCPKTPVQTTPTHKEEETDVWGAAITHSCDSIKTPTRVTTQSPGWSCRSFRKGQNGIYRVKDS
Sbjct: 1 MSHIIPFFLIQHRTGQAGGAYSCILGRDTIPLMLERQGKTMKLDDTLLKIRRADSEEFTKNERPEHSIERSLSNLSLRDNDFKRPLNKFQNSDLHHTYFLQRTKTLQAAGKPEYAQAAAMQAFLLLPDAPEARAKVLSLTREISLTDFGVGPSANQLTTEGAGLFIDWGQDEAPEHWYRKGTGEMMEKSLPYTALHALELAIHAQHLPTTILQKKARLCIHLAGASSELEGLADFSVIFEKLPHLEELEVVQVGWMGVPGPCKRTLPDPQAPPSGLIVGETKMLGGGCRLRIRRYKGLYHDFLSKAFRHHFDGQGYLHEAPDLVLMANPSLDAYFDSWAPTLACLRDAGYFTVVTGGNLDHSREHHNPILQAMGVRMALHLRTSRFGIVHGRRACKNHHLCAFLGPAPFLPENLRHPSSDQEWRAVRHLLRHIGVDTGARGEMQARLALLKQQVAVISVAQTALAASRRLGLGYEGEILPKRNGSIAGSISVENETCNAFKKVKLHDEKERPFPVKDEDSGEGEEEAANTCPKTPVQTTPTHKEEETDVWGAAITHSCDSIKTPTRVTTQSPGWSCRSFRKGQNGIYRVKDS 592
BLAST of EWM28031.1 vs. NCBI_GenBank
Match: gi|553183529|ref|XP_005853915.1| (tpr domain-containing protein [Nannochloropsis gaditana CCMP526] >gi|422295143|gb|EKU22442.1| tpr domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0 Identity = 343/356 (96.35%), Postives = 343/356 (96.35%), Query Frame = 0
Query: 33 MLERQGKTMKLDDTLLKIRRADSEEFTKNERPEHSIERSLSNLSLRDNDFKRPLNKFQNSDLHHTYFLQRTKTLQAAGKPEYAQAAAMQAFLLLPDAPEARAKVLSLTREISLTDFGVGPSANQLTTEGAGLFIDWGQDEAPEHWYRKGTGEMMEKSLPYTALHALELAIHAQHLPTTILQKKARLCIHLAGASSELEGLADFSVIFEKLPHLEELEVVQVGWMGVPGPCKRTLPDPQAPPSGLIVGETKMLGGGCRLRIRRYKGLYHDFLSKAFRHHFDGQGYLHEAPDLVLMANPSLDAYFDSWAPTLACLRDAGYFTVVTGGNLDHSREHHNPILQAMGVRMALHLRTSRFGI 388
MLERQG TMKLDD LLKIRRADSEEFTKNERPEHSIERSLSNLSLRDNDFKRPLNKFQNSDLHHTYFLQRTKTLQAAGKPEYAQAAAMQAFLLLPDAPEARAKVLSLTREISLTDFGVGPSANQLTTEGAGLFIDWGQDEAPEHWYRKGTGEMMEKSLPYTALHALELAIHAQHLPTTILQKKARLCIHLAGASSELEGLADFSVIFEKLPHLEELEVVQVGWMGVPGPCKRTLPDPQAPPSGLIVGETKMLGGGCRLR RRYKGLYHDFLSKAFRHHFDGQGYLHEAPDLVLMANPSLDAYFDSWAPTLACLRDAGYFTVVTGGNLDHSREHHNPILQAMG RFGI
Sbjct: 1 MLERQGTTMKLDDALLKIRRADSEEFTKNERPEHSIERSLSNLSLRDNDFKRPLNKFQNSDLHHTYFLQRTKTLQAAGKPEYAQAAAMQAFLLLPDAPEARAKVLSLTREISLTDFGVGPSANQLTTEGAGLFIDWGQDEAPEHWYRKGTGEMMEKSLPYTALHALELAIHAQHLPTTILQKKARLCIHLAGASSELEGLADFSVIFEKLPHLEELEVVQVGWMGVPGPCKRTLPDPQAPPSGLIVGETKMLGGGCRLRTRRYKGLYHDFLSKAFRHHFDGQGYLHEAPDLVLMANPSLDAYFDSWAPTLACLRDAGYFTVVTGGNLDHSREHHNPILQAMG----------RFGI 346
BLAST of EWM28031.1 vs. NCBI_GenBank
Match: gi|873225510|emb|CEM23842.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 76.2554 bits (186), Expect = 6.298e-11 Identity = 56/169 (33.14%), Postives = 79/169 (46.75%), Query Frame = 0
Query: 189 SLPYTALHALELAIHAQHLPTTILQKKARLCIHLAGASSELEGLADFSVIFEKLPHLEELEVVQVGWMGVPGPCKRTLPDPQ-APPSGLIVGETKMLGGGCRLRIRRYKGLYHDFLSKAFRHHFDGQGYLHEAPDLVLMANPSLDAYFDSWAPTLACLRDAGYFTVVTG 356
S P T L+AL + H P K R+ +H+ G + + E A +S I ++P L+EL VV VG++G + L PP K L G L R ++GLYH+F +G G DL L++NPS+D D+W PTL L +VTG
Sbjct: 282 SYPLTVLNAL----NQLHPPPVNELAKPRVVMHVVGVAGDYEAEAQWSAILTRVPSLKELIVVLVGFLGEGDRWGKELTYGMLGPPL------PKTLESGQTLECRHFRGLYHEFTQVYGDDVAEGGGL---CADLCLLSNPSIDRSLDTWLPTLTHLLKNNKLCIVTG 437
BLAST of EWM28031.1 vs. NCBI_GenBank
Match: gi|675127800|ref|XP_008885787.1| (tetratricopeptide repeat-containing protein [Hammondia hammondi] >gi|661335355|gb|KEP63493.1| tetratricopeptide repeat-containing protein [Hammondia hammondi]) HSP 1 Score: 64.3142 bits (155), Expect = 3.653e-7 Identity = 46/147 (31.29%), Postives = 71/147 (48.30%), Query Frame = 0
Query: 214 KKARLCIHLAGASSELEGLADFSVIFEKLPHLEELEVVQVGWMGVPGPCKRTLPDPQAPPSGLIVGETKMLGGGCRLRIRRYKGLYHDFLSKAFRHHFDGQGYL-HEA----PDLVLMANPSLDAYFDSWAPTLACLRDAGYFTVVT 355
+K LC+HL GA+S E F+V+ E+ PH+ L +V +G++G G + TL + P ++ K G +L + +KG Y +F+ G L +EA PD ++ P DSW P L L DA ++VT
Sbjct: 310 RKEVLCVHLIGATSAHEMGCKFTVLMERWPHVTTLILVFIGFLGPHGKLENTLERGKIQPPAVV----KTEDGREQLAV-PFKGTYEEFVQAV-------PGVLTNEACTFFPDFAVLGTPLFARDLDSWKPALKLLIDAKVLSIVT 444
BLAST of EWM28031.1 vs. NCBI_GenBank
Match: gi|1008953064|gb|KYK69839.1| (tetratricopeptide repeat-containing protein, partial [Toxoplasma gondii TgCatPRC2]) HSP 1 Score: 62.7734 bits (151), Expect = 7.979e-7 Identity = 44/147 (29.93%), Postives = 72/147 (48.98%), Query Frame = 0
Query: 214 KKARLCIHLAGASSELEGLADFSVIFEKLPHLEELEVVQVGWMGVPGPCKRTLPDPQAPPSGLIVGETKMLGGGCRLRIRRYKGLYHDFLSKAFRHHFDGQGYL-HEA----PDLVLMANPSLDAYFDSWAPTLACLRDAGYFTVVT 355
+K LC+HL G++S E F+V+ E+ P+++ L +V +G++G G + TL + P ++ K G +L + +KG Y +F+ G L HE PD +++ P DSW P L L DA ++VT
Sbjct: 182 RKEVLCVHLIGSTSAHEMGCKFTVLMERWPNVKTLILVFIGFLGPHGKLENTLERGKLQPPAVV----KTEDGREQLAV-PFKGTYEEFVQAV-------PGVLTHEECTFFPDFAVLSTPLFARDLDSWKPALKLLLDANVLSIVT 316 The following BLAST results are available for this feature:
BLAST of EWM28031.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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