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Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF1336 |
| Orig transcript id | gnl|cribi|Naga_100008g72.7893.mrna |
| Orig protein id | gnl|cribi|Naga_100008g72.7893 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:997299..999286 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2701 ID=rna2701|Name=rna2701|organism=Nannochloropsis gaditana|type=mRNA|length=705bp
ATGGGAGGAAGCTCCGGTTTGCAATCACTTCGTCCTCCGTCCCATTTTCA
CCCACTCGTTGTGCCCGCATTCGTACCCGACAGGTCGTCCTACTTGGTTG
CTTTCTCTTCATACAGATGCCTTCTCAAAAGACATTCCGCACTAAGCGGA
CGCTGGCCAAAAAGCAGAAGCAGAACCGCCCCATCCCTTACTGGACTCGG
CTTCGCACAGGGAACACAATCCGATACAATGCCAAGAGGCGCCACTGGCG
CCGTACGAAGTTGGGAATCTAAGCCAGGATTGAACGTGTTACACAAGGAA
AGAGAGGGGCGTAACGAGCGACTACAGGAAGAGCAAGGGCATCAAGGGTT
GCGGGCGAGGAAGCGATTGAGGTGTCAAGGGTGGCAGTGTAAGGGAAGTG
GGTTAAATACGGGTTCGGTCATAAATTTGAGGGTCATATGGCCGATCTGG
AGTCCGGTGAGATGTTGCCTGCCTGGCAACGTGTTTTCAGGCGACTGGAG
GGAGAGAAGAATAAGTCCGAGAAGATTTGACCGGGAGAAGCTGGCAATTA
TTTACGTCTATGCTGCTTTGAACTTCGGCTCTGACGCATTCCCCTCGTGC
CACTGCCTCCCGATGCCATTTGCTCACACTCGCCGACCAACAATTATCGT
ACAAAAAGAGGACACGGGCCTGTATGTTCCTGTGGTGGGTGCTTTCCCTC
CTTGA back to topprotein sequence of rna2701 >rna2701-protein ID=rna2701-protein|Name=rna2701|organism=Nannochloropsis gaditana|type=polypeptide|length=424bp
MSSSQDTTSGSIGMTINASPEKSCTCLPKCSKTTDEIRGPDGLQSQETVM
LIPGSTIRGTAFSPLDDVTARIASCTVIDEDSAHVQPGAVSNDGNSSQTC
NIPGHSDRATISSYPPALALPRHSWGHTSASSFRVRSRHYKRAKKKEPSL
EAFYKLVSFDLIKASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQL
PDGEPAMFNASDNGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGK
DHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPSFI
SNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRY
LQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDYEAAVEGDFDGL
GGEVPSGGGRDTGAHGERKSGVSR back to topmRNA from alignment at CM002459.1:997299..999286- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2701 ID=rna2701|Name=rna2701|organism=Nannochloropsis gaditana|type=mRNA|length=1988bp|location=Sequence derived from alignment at CM002459.1:997299..999286- (Nannochloropsis gaditana)
AGTCGTTACCAACCGTGTTTCTCGCTGTCTTTCCCCGTAGGTTGGAGTGA
ATGTTGTTTCGGGATTGCCTTGAGGCCGCCGGGAAGATCAGACGGAGGTA
AAGAAGTACAACATAGGGCCGGACTTGACTTTGCCTGGGCCAGCTGCACC
TGTTGTGATGTCCAGTTCCCAGGACACGACATCTGGTTCAATTGGGATGA
CCATCAATGCAAGTCCTGAGAAAAGTTGTACTTGTCTCCCGAAGTGTTCA
AAGACAACGGATGAGATTCGTGGTCCGGACGGTTTGCAGAGCCAAGAAAC
TGTCATGCTTATTCCAGGATCGACGATTCGGGGCACAGCATTCAGTCCTC
TGGACGATGTGACGGCGAGAATAGCTTCCTGTACTGTCATAGACGAAGAC
TCAGCGCATGTGCAACCCGGAGCAGTTAGCAACGACGGAAACTCTTCTCA
AACATGCAACATCCCCGGACATTCGGATCGTGCGACGATTTCTTCCTACC
CCCCAGCATTAGCCCTTCCCCGCCACAGCTGGGGACATACGTCCGCATCT
TCGTTTCGCGTGCGCAGCCGGCACTATAAGCGTGCAAAGAAGAAGGAGCC
ATCCTTGGAGGCCTTCTACAAACTTGTTTCGTTCGACCTGATCAAGGCCA
GCGTGGGATGTGTGAATCATGTTGGCCGTTTGATGGATCTGGAGAAGGTG
CGTCCAGCCCGCAGTTTTCCGGGCTTGCCTCCATTGTTCATAGTCAACAC
ACAACTGCCAGACGGAGAGCCCGCCATGTTCAATGCTTCGGACAACGGGC
CTGGCCGGAGTGCCATTTTTGTGTTCGCCTTAAAAGAGTCCACCGTGGAT
ATGCTGGAGGCGCATGCGGACAGCCCCTCAGCGGCCGTACGGGAAAGGAA
GGGGAAGGATCACAGAGAAGCCTTCAGTGTGCCTCCGGCATTGCAGCTTC
TACAGGAATACTTTCGTCGGGCCCCGCATGACCCCGACGTCAGGGGTCGG
CTCAAGGTGATTGCCAGTTGCGCTAATATGGACGCGCTGCACTTGCCGTC
ATTCATTTCGAACTACAACGGAAAGCCCGTTCTCATCACCAAGTCCGGTC
GCCTCCACCAGGGGATTTCCTCCTCGAACGGGGAAGACTTATTGTACATA
GAGATGGACATTTGCGTGCATCGGTTCGCATATGTGGCGAGGAAAGGATT
TAGGTACCTGCAAAAGAGGTTTTCAAAGATGATTTTGGATATCGCTTTTC
TGGTAGAAGGACGAGAGGAGGATGAGCTCCCGGAACAAATTTTGGGCGCA
GCGAGACTGAACAACGTAGACTATGAGGCGGCGGTGGAGGGAGATTTCGA
TGGGCTGGGAGGGGAGGTGCCGTCGGGGGGAGGCCGAGACACAGGAGCGC
ACGGGGAAAGAAAAAGCGGAGTGTCGCGATGACCGTCTTGAGGGGGGGAA
ATTTCGGGGAGGCGGCAGGCAATAGGTGTATTTTGGTGACTGAACAGTCT
CGGAGTTTCGTCTTCAAGGAGGGAAAGCACCCACCACAGGAACATACAGG
CCCGTGTCCTCTTTTTGTACGATAATTGTTGGTCGGCGAGTGTGAGCAAA
TGGCATCGGGAGGCAGTGGCACGAGGGGAATGCGTCAGAGCCGAAGTTCA
AAGCAGCATAGACGTAAATAATTGCCAGCTTCTCCCGGTCAAATCTTCTC
GGACTTATTCTTCTCTCCCTCCAGTCGCCTGAAAACACGTTGCCAGGCAG
GCAACATCTCACCGGACTCCAGATCGGCCATATGACCCTCAAATTTATGA
CCGAACCCGTATTTAACCCACTTCCCTTACACTGCCACCCTTGACACCTC
AATCGCTTCCTCGCCCGCAACCCTTGATGCCCTTGCTCTTCCTGTAGTCG
CTCGTTACGCCCCTCTCTTTCCTTGTGTAACACGTTCAACTACTCAGCAA
TTCCCAGCTTGAGACAACGCAGTTTACCGAGAAAACTT back to topCoding sequence (CDS) from alignment at CM002459.1:997299..999286- >rna2701 ID=rna2701|Name=rna2701|organism=Nannochloropsis gaditana|type=CDS|length=1275bp|location=Sequence derived from alignment at CM002459.1:997299..999286- (Nannochloropsis gaditana)
ATGTCCAGTTCCCAGGACACGACATCTGGTTCAATTGGGATGACCATCAA
TGCAAGTCCTGAGAAAAGTTGTACTTGTCTCCCGAAGTGTTCAAAGACAA
CGGATGAGATTCGTGGTCCGGACGGTTTGCAGAGCCAAGAAACTGTCATG
CTTATTCCAGGATCGACGATTCGGGGCACAGCATTCAGTCCTCTGGACGA
TGTGACGGCGAGAATAGCTTCCTGTACTGTCATAGACGAAGACTCAGCGC
ATGTGCAACCCGGAGCAGTTAGCAACGACGGAAACTCTTCTCAAACATGC
AACATCCCCGGACATTCGGATCGTGCGACGATTTCTTCCTACCCCCCAGC
ATTAGCCCTTCCCCGCCACAGCTGGGGACATACGTCCGCATCTTCGTTTC
GCGTGCGCAGCCGGCACTATAAGCGTGCAAAGAAGAAGGAGCCATCCTTG
GAGGCCTTCTACAAACTTGTTTCGTTCGACCTGATCAAGGCCAGCGTGGG
ATGTGTGAATCATGTTGGCCGTTTGATGGATCTGGAGAAGGTGCGTCCAG
CCCGCAGTTTTCCGGGCTTGCCTCCATTGTTCATAGTCAACACACAACTG
CCAGACGGAGAGCCCGCCATGTTCAATGCTTCGGACAACGGGCCTGGCCG
GAGTGCCATTTTTGTGTTCGCCTTAAAAGAGTCCACCGTGGATATGCTGG
AGGCGCATGCGGACAGCCCCTCAGCGGCCGTACGGGAAAGGAAGGGGAAG
GATCACAGAGAAGCCTTCAGTGTGCCTCCGGCATTGCAGCTTCTACAGGA
ATACTTTCGTCGGGCCCCGCATGACCCCGACGTCAGGGGTCGGCTCAAGG
TGATTGCCAGTTGCGCTAATATGGACGCGCTGCACTTGCCGTCATTCATT
TCGAACTACAACGGAAAGCCCGTTCTCATCACCAAGTCCGGTCGCCTCCA
CCAGGGGATTTCCTCCTCGAACGGGGAAGACTTATTGTACATAGAGATGG
ACATTTGCGTGCATCGGTTCGCATATGTGGCGAGGAAAGGATTTAGGTAC
CTGCAAAAGAGGTTTTCAAAGATGATTTTGGATATCGCTTTTCTGGTAGA
AGGACGAGAGGAGGATGAGCTCCCGGAACAAATTTTGGGCGCAGCGAGAC
TGAACAACGTAGACTATGAGGCGGCGGTGGAGGGAGATTTCGATGGGCTG
GGAGGGGAGGTGCCGTCGGGGGGAGGCCGAGACACAGGAGCGCACGGGGA
AAGAAAAAGCGGAGTGTCGCGATGA back to top
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