EWM28001.1, cds2693 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28001.1 vs. NCBI_GenBank
Match: gi|585110342|gb|EWM28001.1| (protein of unknown function DUF1336 [Nannochloropsis gaditana]) HSP 1 Score: 875.544 bits (2261), Expect = 0.000e+0 Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0 Query: 1 MSSSQDTTSGSIGMTINASPEKSCTCLPKCSKTTDEIRGPDGLQSQETVMLIPGSTIRGTAFSPLDDVTARIASCTVIDEDSAHVQPGAVSNDGNSSQTCNIPGHSDRATISSYPPALALPRHSWGHTSASSFRVRSRHYKRAKKKEPSLEAFYKLVSFDLIKASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASDNGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPSFISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDYEAAVEGDFDGLGGEVPSGGGRDTGAHGERKSGVSR 424 MSSSQDTTSGSIGMTINASPEKSCTCLPKCSKTTDEIRGPDGLQSQETVMLIPGSTIRGTAFSPLDDVTARIASCTVIDEDSAHVQPGAVSNDGNSSQTCNIPGHSDRATISSYPPALALPRHSWGHTSASSFRVRSRHYKRAKKKEPSLEAFYKLVSFDLIKASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASDNGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPSFISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDYEAAVEGDFDGLGGEVPSGGGRDTGAHGERKSGVSR Sbjct: 1 MSSSQDTTSGSIGMTINASPEKSCTCLPKCSKTTDEIRGPDGLQSQETVMLIPGSTIRGTAFSPLDDVTARIASCTVIDEDSAHVQPGAVSNDGNSSQTCNIPGHSDRATISSYPPALALPRHSWGHTSASSFRVRSRHYKRAKKKEPSLEAFYKLVSFDLIKASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASDNGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPSFISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDYEAAVEGDFDGLGGEVPSGGGRDTGAHGERKSGVSR 424
BLAST of EWM28001.1 vs. NCBI_GenBank
Match: gi|298714502|emb|CBJ27524.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 179.489 bits (454), Expect = 6.149e-47 Identity = 108/282 (38.30%), Postives = 147/282 (52.13%), Query Frame = 0 Query: 117 ALALPRHSWGHTSASSFRVRSRHYKRAKKKEPSLEAFYKLVSFDLI--KASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASDNGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPSFISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDYEAAVEGD 396 +L P HSW + S F VR + Y + K K E+ Y +V D+ +A VG + L K PA S PG+PPL ++N QLP PA+ ++++GPG + F +KEST +E A + S VR L Y +R D D +GR K IA AN ++L LPSFI+ YNGKPVLI +SG +G + YIE I VHRF+++A+K L+ F M+L + F VEGR DELPE +L + L+ E AVE D Sbjct: 329 SLTAPHHSWSNGIDSVFHVRGKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTATKDLPAVSVPGVPPLLVINVQLPSASPALMTSAEDGPGVQCVMYFRMKESTARAMENLATA-SEGVR------------------LWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKGEN--------YIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGRAADELPESLLACSTLHYPMMERAVEFD 583
BLAST of EWM28001.1 vs. NCBI_GenBank
Match: gi|551591879|ref|XP_005780119.1| (hypothetical protein EMIHUDRAFT_413817 [Emiliania huxleyi CCMP1516] >gi|485632725|gb|EOD27690.1| hypothetical protein EMIHUDRAFT_413817 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 152.14 bits (383), Expect = 3.076e-39 Identity = 99/286 (34.62%), Postives = 149/286 (52.10%), Query Frame = 0 Query: 129 SASSFRVR-SRHYKRAKKKEPSLEAFYKLVSFDLIKASVGCVNHV---GRLMDLEKVRPARSFPGLP--PLFIVNTQLPDGEPAMFNA-SDNGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPSFISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVD------YEAAVEGDFDGLG 401 + S F VR +Y R K PS ++ Y L S + KA C H+ R+ E + PA S PGLP L +V +P+ PAMF D GP + + VF LKE T + + A SP+ A+ R S + ++ +R K+I +N L LP+ ++ YNGKPV+I K+G LHQG SSS Y+EMDI VH++ Y+ARKG +++ + K+ ++ F+++G + ELPE++LGA +N VD + ++ +GD D G Sbjct: 23 AGSQFNVRVGPNYARKGNKSPSDDSMYHLSSVHMFKAE-SCTKHLHMATRMPLPEPLVPADS-PGLPLPQLLVVTLVVPEEGPAMFGGKEDGGPSMNCVMVFQLKEKTAEDAASEAPSPAVALLSRYYSMSIAIASGGSPTGAEKSEIQK------MRACFKLIGQASNFSDLGLPAMLAGYNGKPVIINKTGELHQGKSSSGAS---YMEMDILVHKWQYIARKGLYSIKEHYCKLDAEVGFVIQGEADSELPERMLGAVEINGVDPTLLAKWPSSGDGDGDATG 297
BLAST of EWM28001.1 vs. NCBI_GenBank
Match: gi|1045366654|dbj|GAU45416.1| (hypothetical protein TSUD_243270, partial [Trifolium subterraneum]) HSP 1 Score: 135.576 bits (340), Expect = 4.040e-32 Identity = 95/274 (34.67%), Postives = 134/274 (48.91%), Query Frame = 0 Query: 124 SWGHTSASSFRVRSRHYKRAKKKEPSLEAF-YKLVSFDLIKASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASDNGPGRSAIFVFALKES-TVDMLEAHADSPSAAVRER--KGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPS----FISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDY 389 SW S S F++R + K+K P+ E YK + DL S VNH+ + +DL V P S G+P L IVN QLP ++F NG G S + F L E+ ++ + D V + K K + + SVP R RLK++A N + LHL S I YNGKPVL S HQ N Y E+D+ +HRF+Y++RKG L+ R ILD+ ++ ++E+ELPEQ+L RLN +D+ Sbjct: 140 SWSTVSPSVFKLRGETFFIDKQKSPAPETCAYKPIGVDLF-VSPKKVNHIAKHLDLPSVSPNES--GVPSLLIVNIQLPTYPASVFLGDANGEGLSLVLYFKLSENFETEISQCFQDKIKRLVDDEMEKVKGYTKESSVP------------------FRERLKILAGVVNPEDLHLNSAERKLIQAYNGKPVL---SRPQHQFFKGPN-----YFEIDLDIHRFSYISRKGLDSLRDRVKHGILDVGLTIQAQKEEELPEQVLCCLRLNKIDF 384
BLAST of EWM28001.1 vs. NCBI_GenBank
Match: gi|1191654255|gb|OTG06227.1| (hypothetical protein HannXRQ_Chr12g0382371 [Helianthus annuus]) HSP 1 Score: 135.191 bits (339), Expect = 1.360e-31 Identity = 90/272 (33.09%), Postives = 132/272 (48.53%), Query Frame = 0 Query: 124 SWGHTSASSFRVRSRHYKRAKKKE--PSLEAFYKLVSFDLIKASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASDNGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPS----FISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDY 389 SW H FRVR ++Y R KKKE P+ A+Y D+ S V+H+ R ++L V P+ LPP+ +VN Q+P A F +G G S + F L ++ L + + + D E P L AP R RLK++ N+D L L + ++ YN KPVL +QG++ Y E+D+ +HRF+Y++RKGF Q+R ILD ++G +++ELPEQIL RLN +DY Sbjct: 209 SWSHVEPQIFRVRGKNYFRDKKKEHAPNYAAYYPF-GVDVF-LSQRKVDHIARFVELPIVGPSSG--ELPPILVVNIQVPLYPAAFFQGEIDGEGVSFVLYFKLSDNYSKELSSQFQDNMRRILD----DEMEKVKGFPLDTL-------AP----FRERLKILGRVVNVDDLQLSAPERKIMNAYNEKPVLSRPQHEFYQGVN--------YFEIDLDMHRFSYISRKGFEAFQERLKNCILDFGLTIQGNKQEELPEQILCCVRLNGIDY 453
BLAST of EWM28001.1 vs. NCBI_GenBank
Match: gi|902183264|gb|KNA10093.1| (hypothetical protein SOVF_147640 [Spinacia oleracea]) HSP 1 Score: 134.806 bits (338), Expect = 3.815e-31 Identity = 98/272 (36.03%), Postives = 135/272 (49.63%), Query Frame = 0 Query: 124 SWGHTSASSFRVRSRHYKRAKKKE--PSLEAFYKLVSFDLIKASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASDNGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPS----FISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDY 389 SW H +SFRVR ++Y R KKK+ PS A+Y + DL S + HV R ++L V S G PPL IVN Q+P PA F +G G + + F + ES + A+ ++R R D E P + AP R RLK++ N+D LHL + I+ YN KPVL S H+ S N Y E+D+ +HRF+Y++RKGF R ILD ++G + ++LPEQIL RLN +DY Sbjct: 248 SWSHIEPNSFRVRGQNYLRDKKKDFAPSYAAYYP-IGVDLF-LSPRKIEHVARFVELPAVN---SSAGFPPLLIVNAQVPLYPPAFFQNEIDGEGINIVMYFKINESFSKEVPANFQE---SMR-RLMDDEVEKVKGFPMDTI-------AP----FRERLKILGRLGNVDDLHLSAAEKKLINAYNEKPVL---SRPQHEFFSGEN-----YFEIDLDMHRFSYISRKGFEAFLDRLKMCILDFGLTIQGNKAEDLPEQILCCVRLNGLDY 491
BLAST of EWM28001.1 vs. NCBI_GenBank
Match: gi|731344247|ref|XP_010683310.1| (PREDICTED: uncharacterized protein LOC104898017 [Beta vulgaris subsp. vulgaris] >gi|870855444|gb|KMT07177.1| hypothetical protein BVRB_6g155020 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 132.109 bits (331), Expect = 3.505e-30 Identity = 93/272 (34.19%), Postives = 136/272 (50.00%), Query Frame = 0 Query: 124 SWGHTSASSFRVRSRHYKRAKKKE--PSLEAFYKLVSFDLIKASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASDNGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPS----FISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDY 389 SW +SFRVR++++ R KKK+ P+ A+Y L D+ S V HV R + L V S G PPL IVN Q+P PA F +G G + + F + ES L+ S A+R+ + + S P + + + R RLK++ AN+D L++ + I+ YN KPVL S H+ S N Y E+D+ +HRF+Y++RKGF R +LD ++G + +ELPEQIL RLN +DY Sbjct: 247 SWSPVEPNSFRVRAQNFFRDKKKDFAPNYAAYYPL-GVDVF-LSPRKVEHVARFVQLPSVN---SSAGFPPLLIVNAQVPLYPPAFFQNEADGEGINIVMYFKINES---FLKEVPSSFQEAIRKMMHDEVEKVKSFP--MDTIAPF----------RERLKILGRLANLDDLNISAAEKKLINAYNEKPVL---SRPQHEFFSGEN-----YFEIDLDMHRFSYISRKGFEAFIDRLKMCVLDFGLTIQGNKAEELPEQILCCVRLNGLDY 490
BLAST of EWM28001.1 vs. NCBI_GenBank
Match: gi|1026776858|gb|OAE35491.1| (hypothetical protein AXG93_2189s1250 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 132.109 bits (331), Expect = 8.705e-30 Identity = 87/279 (31.18%), Postives = 129/279 (46.24%), Query Frame = 0 Query: 125 WGHTSASSFRVRSRHYKRAKKK--EPSLEAFYKLVSFDLIKASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASDNGPGRSAIFVFALKESTV--------DMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHL----PSFISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDY 389 W S F++R +HY + KKK P+ F + DL +S ++H+ + ++L A LP +FIVN QLP PA+F NG G S + F L E +V DML V+ G+ H R RLKV+A N + +H + NYN KPVL ++G + Y+E+D+ VHRF+Y+ARKGF ++R +LDI ++ ++DELPEQ+L A RL+ +D+ Sbjct: 353 WSEVEPSVFKLRGKHYSKDKKKFAAPNYSLFVP-IGVDLFMSSQK-LDHIAQYVELPSQDVALGADTLPGVFIVNVQLPLYPPAIFMGDGNGDGLSLVLYFKLSEESVKQAPTFVKDMLRKFVTDEVEKVKAFVGESHHP-----------------------FRDRLKVVARLVNPEEIHFSGAEKKLLVNYNEKPVLSRPQHFFYRGAN--------YLEVDLDVHRFSYIARKGFDTFRERLKHCVLDIGLTLQATKQDELPEQVLAAVRLHKLDF 598
BLAST of EWM28001.1 vs. NCBI_GenBank
Match: gi|1173956551|gb|OQS03311.1| (hypothetical protein THRCLA_04392 [Thraustotheca clavata]) HSP 1 Score: 132.109 bits (331), Expect = 1.548e-29 Identity = 92/282 (32.62%), Postives = 139/282 (49.29%), Query Frame = 0 Query: 123 HSWGHTSASSFRVRSRHYKRAKKKEPSLEAFYKLVSFDLIKAS--VGCV-NHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASD-NGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLP----SFISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDYEAAVEGD 396 ++W +T+A++F VRS+ YKR KKKE S A + V DLI++ + C+ HV +L R LF++N QLP P++F ++ +GPG + + + + + D LE +P+ PA++LL+ + A +P + R KVIA N L + N PVL R++ + E+DI VH F+ VAR G L + SKMI+D+ F+++G EDELPEQILG AR+ VD +A D Sbjct: 731 NAWSYTTANTFNVRSQDYKRLKKKEASAGALFDFVGADLIRSESKIDCITQHVKLPENLNGER----------LFVLNAQLPLYGPSLFGGNNYDGPGVNLVMYWTIPKDVQDQLE----NPTT-----------------PAIRLLKRFLNSA-KEPSILERFKVIAQVVNEKDCGLSGMPRKLLQKNNATPVLTRPQHRIYHRKH--------FTEVDIDVHMFSLVARTGINSLVDKTSKMIIDMCFVLQGETEDELPEQILGCARMVRVDLSSAKHLD 972
BLAST of EWM28001.1 vs. NCBI_GenBank
Match: gi|695027052|ref|XP_009400850.1| (PREDICTED: uncharacterized protein LOC103984978 isoform X1 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 130.183 bits (326), Expect = 1.893e-29 Identity = 93/281 (33.10%), Postives = 136/281 (48.40%), Query Frame = 0 Query: 124 SWGHTSASSFRVRSRHYKRAKKKE--PSLEAFYKL-VSFDLIKASVGCVNHVGRLMDLEKVRPARSFPG-LPPLFIVNTQLPDGEPAMFNASDNGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDV--RGRLKVIASCANMDALHLPS----FISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDYEAAVE 394 SW H S+F+VR HY R KKK+ P+ A+ V L + + NH+ R ++L P S G LPP+ +VN Q+P +F + +G G S + F L E L +H R+ D E E + P D V R RLK++ AN++ LHL + I+ YN +PVL S H S +N Y E+D+ +HRF+Y+ARKGF R +LD ++G + ++LPE IL RLNN+DY + ++ Sbjct: 260 SWSHIEPSTFKVRGPHYFRDKKKDFAPNNAAYCPFGVDVYLCQQKI---NHIARFVEL----PNLSSSGRLPPILVVNIQVPLYPATIFQSETDGEGMSFVLYFRLSEDYSKELPSHF-----LENIRRIIDDEE------------ERVKSFPMDTFVPFRERLKILVHAANLEDLHLSTAERKLINTYNERPVL---SRPQHDFYSGNN-----YFEIDLDIHRFSYIARKGFEAFLDRLKFCVLDFGLTIQGNKPEDLPEHILCCVRLNNIDYTSYLQ 508 The following BLAST results are available for this feature:
BLAST of EWM28001.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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