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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100008g71.7885.mrna |
| Orig protein id | gnl|cribi|Naga_100008g71.7885 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:996350..997773 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2700 ID=rna2700|Name=rna2700|organism=Nannochloropsis gaditana|type=mRNA|length=234bp
ATGTGTCTCAAAGAAGCCTGCAGGTTACTATTGTTTCAAAGCGGGTTCGT
CGCCATATCGCGGGTCTGTGTCCATAATCCTTGTAATCTTCAAGCGCAAG
GGCACCAGACCCTGGCTCATGCGAATCTTGTTATCGTGAGCAGGGGGAGG
TTGATTGAAAAGTTTGCTCTCAGAAAACCTGTATTAGAATTCCAGATCAT
TTATTGGGCTTGCAAGCCATTAAACAAGACGTAA back to topprotein sequence of rna2700 >rna2700-protein ID=rna2700-protein|Name=rna2700|organism=Nannochloropsis gaditana|type=polypeptide|length=234bp
MGGSSGLQSLRPPSHFHPLVVPAFVPDRSSYLVAFSSYRCLLKRHSALSG
RWPKSRSRTAPSLTGLGFAQGTQSDTMPRGATGAVRSWESKPGLNVLHKE
REGRNERLQEEQGHQGLRARKRLRCQGWQCKGSGLNTGSVINLRVIWPIW
SPVRCCLPGNVFSGDWRERRISPRRFDREKLAIIYVYAALNFGSDAFPSC
HCLPMPFAHTRRPTIIVQKEDTGLYVPVVGAFPP back to topmRNA from alignment at CM002459.1:996350..997773+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2700 ID=rna2700|Name=rna2700|organism=Nannochloropsis gaditana|type=mRNA|length=1424bp|location=Sequence derived from alignment at CM002459.1:996350..997773+ (Nannochloropsis gaditana)
atgggaggaagctCCGGTAAGGATGGATGGTGGGCTGAGGGCTCGTCTTC
CGCCCCTCTCATTTCGTCGTCGCCGCTTGCTTAGGCGTGTGAATTTTAAT
GACGATAGAGGCGAACAGCTTTCTGCTCAAATGAATAAGAGGATGATGCA
CTCGCCATGAAAACAGCATTGCCGTTGCCGGAAGGTGCTTTTATGCCTTA
AAACCTCAGGAACTAGGTTTGCAATCacttcgtcctccgtcccatTTTCA
CCCACTCGTTGTGCCCGCATTCGTACCCGACAGGTCGTCCTACTTGGTTG
CTTTCTCTTCATACAGATGGTAAGACATTTATGGATGGACCAAGGTTAAA
TAAGTAACGTTGAGCGTCGGATGCGTGTGTTGAAATGAAACACACGCAGT
AGAGTATGAGGGTCGCGACCATCACACCACCCCTCGAAAGTCCGAACCAT
TGGGATTTTTTCCTCTTGGCTCTAACTGTCTTGTCTCCTGCCTCGTCATC
AACAGCCTTCTCAAAAGACATTCCGCACTAAGCGGACGCTGGCCAAAAAG
CAGAAGCAGAACCGCCCCATCCCTTACTGGACTCGGCTTCGCACAGGGAA
CACAATCCGGTACGTCGGCATGCACACTCTCTGTTTGATGAAGAGATGGG
CGTACAGTTGGTCAATGAAATGTTGGGCTCTACTGATTGTAATCTGCGTG
GGCGCGGGAAGATAGGGTCAAGTGTGGTCTAGAAAGACATGCCTACTCCC
CGCGTGGGACCATCCTCCAAAGCGTTTCTGTCGCACACCCGCATATTCAC
GATCTCTTTGCAATTTCTCAAATGTTTCGCACCATGCAGATACAATGCCA
AGAGGCGCCACTGGCGCCGTACGAAGTTGGGAATCTAAGCCAGGAGTGGA
GTAGTAAATTAGCCTCTCTTTTAACTCCCCCCGTGCGACTCAGATTTCGA
AGTTTTCTCGGTAAACTGCGTTGTCTCAAGCTGGGAATTGCTGAGTAGTT
GAACGTGTTAcacaaggaaagagaggggcgtAACGAGCGACTacaggaag
agcaagggcatCAAGGGTtgcgggcgaggaagcgatTGAGGTGTCAAGGG
TGGCAGTGTAAGGGAAGTGGGTTAAATACGGGTTCGGTCATAAATTTGAG
GGTCATATGGCCGATCTGGAGTCCGGTGAGATGTTGCCTGCCTGGCAACG
TGTTTTCAGgcgactggagggagagaagaataAGTCCGAGAAGATTTGAC
CGGGAGAAGCTGGCAATTATTTACGTCTATGCTGCTTTGAACTTCGGCTC
TGACGCATTCCCCTCGTGCCACTGCCTCCCGATGCCATTTGCTCACACTC
GCCGACCAACAATTATCGTACAAAAAGAGGACACGGGCCTGTATGTTCCT
GTGGTGggtgctttccctccttga back to topCoding sequence (CDS) from alignment at CM002459.1:996350..997773+ >rna2700 ID=rna2700|Name=rna2700|organism=Nannochloropsis gaditana|type=CDS|length=3525bp|location=Sequence derived from alignment at CM002459.1:996350..997773+ (Nannochloropsis gaditana)
atgggaggaagctCCGGTTTGCAATCacttcgtcctccgtcccatTTTCA
CCCACTCGTTGTGCCCGCATTCGTACCCGACAGGTCGTCCTACTTGGTTG
CTTTCTCTTCATACAGATGCCTTCTCAAAAGACATTCCGCACTAAGCGGA
CGCTGGCCAAAAAGCAGAAGCAGAACCGCCCCATCCCTTACTGGACTCGG
CTTCGCACAGGGAACACAATCCGATACAATGCCAAGAGGCGCCACTGGCG
CCGTACGAAGTTGGGAATCTAAGCCAGGATTGAACGTGTTAcacaaggaa
agagaggggcgtAACGAGCGACTacaggaagagcaagggcatCAAGGGTt
gcgggcgaggaagcgatTGAGGTGTCAAGGGTGGCAGTGTAAGGGAAGTG
GGTTAAATACGGGTTCGGTCATAAATTTGAGGGTCATATGGCCGATCTGG
AGTCCGGTGAGATGTTGCCTGCCTGGCAACGTGTTTTCAGgcgactggag
ggagagaagaataAGTCCGAGAAGATTTGACCGGGAGAAGCTGGCAATTA
TTTACGTCTATGCTGCTTTGAACTTCGGCTCTGACGCATTCCCCTCGTGC
CACTGCCTCCCGATGCCATTTGCTCACACTCGCCGACCAACAATTATCGT
ACAAAAAGAGGACACGGGCCTGTATGTTCCTGTGGTGggtgctttccctc
cttgaatgggaggaagctCCGGTTTGCAATCacttcgtcctccgtcccat
TTTCACCCACTCGTTGTGCCCGCATTCGTACCCGACAGGTCGTCCTACTT
GGTTGCTTTCTCTTCATACAGATGCCTTCTCAAAAGACATTCCGCACTAA
GCGGACGCTGGCCAAAAAGCAGAAGCAGAACCGCCCCATCCCTTACTGGA
CTCGGCTTCGCACAGGGAACACAATCCGATACAATGCCAAGAGGCGCCAC
TGGCGCCGTACGAAGTTGGGAATCTAAGCCAGGATTGAACGTGTTAcaca
aggaaagagaggggcgtAACGAGCGACTacaggaagagcaagggcatCAA
GGGTtgcgggcgaggaagcgatTGAGGTGTCAAGGGTGGCAGTGTAAGGG
AAGTGGGTTAAATACGGGTTCGGTCATAAATTTGAGGGTCATATGGCCGA
TCTGGAGTCCGGTGAGATGTTGCCTGCCTGGCAACGTGTTTTCAGgcgac
tggagggagagaagaataAGTCCGAGAAGATTTGACCGGGAGAAGCTGGC
AATTATTTACGTCTATGCTGCTTTGAACTTCGGCTCTGACGCATTCCCCT
CGTGCCACTGCCTCCCGATGCCATTTGCTCACACTCGCCGACCAACAATT
ATCGTACAAAAAGAGGACACGGGCCTGTATGTTCCTGTGGTGggtgcttt
ccctccttgaatgggaggaagctCCGGTTTGCAATCacttcgtcctccgt
cccatTTTCACCCACTCGTTGTGCCCGCATTCGTACCCGACAGGTCGTCC
TACTTGGTTGCTTTCTCTTCATACAGATGCCTTCTCAAAAGACATTCCGC
ACTAAGCGGACGCTGGCCAAAAAGCAGAAGCAGAACCGCCCCATCCCTTA
CTGGACTCGGCTTCGCACAGGGAACACAATCCGATACAATGCCAAGAGGC
GCCACTGGCGCCGTACGAAGTTGGGAATCTAAGCCAGGATTGAACGTGTT
AcacaaggaaagagaggggcgtAACGAGCGACTacaggaagagcaagggc
atCAAGGGTtgcgggcgaggaagcgatTGAGGTGTCAAGGGTGGCAGTGT
AAGGGAAGTGGGTTAAATACGGGTTCGGTCATAAATTTGAGGGTCATATG
GCCGATCTGGAGTCCGGTGAGATGTTGCCTGCCTGGCAACGTGTTTTCAG
gcgactggagggagagaagaataAGTCCGAGAAGATTTGACCGGGAGAAG
CTGGCAATTATTTACGTCTATGCTGCTTTGAACTTCGGCTCTGACGCATT
CCCCTCGTGCCACTGCCTCCCGATGCCATTTGCTCACACTCGCCGACCAA
CAATTATCGTACAAAAAGAGGACACGGGCCTGTATGTTCCTGTGGTGggt
gctttccctccttgaatgggaggaagctCCGGTTTGCAATCacttcgtcc
tccgtcccatTTTCACCCACTCGTTGTGCCCGCATTCGTACCCGACAGGT
CGTCCTACTTGGTTGCTTTCTCTTCATACAGATGCCTTCTCAAAAGACAT
TCCGCACTAAGCGGACGCTGGCCAAAAAGCAGAAGCAGAACCGCCCCATC
CCTTACTGGACTCGGCTTCGCACAGGGAACACAATCCGATACAATGCCAA
GAGGCGCCACTGGCGCCGTACGAAGTTGGGAATCTAAGCCAGGATTGAAC
GTGTTAcacaaggaaagagaggggcgtAACGAGCGACTacaggaagagca
agggcatCAAGGGTtgcgggcgaggaagcgatTGAGGTGTCAAGGGTGGC
AGTGTAAGGGAAGTGGGTTAAATACGGGTTCGGTCATAAATTTGAGGGTC
ATATGGCCGATCTGGAGTCCGGTGAGATGTTGCCTGCCTGGCAACGTGTT
TTCAGgcgactggagggagagaagaataAGTCCGAGAAGATTTGACCGGG
AGAAGCTGGCAATTATTTACGTCTATGCTGCTTTGAACTTCGGCTCTGAC
GCATTCCCCTCGTGCCACTGCCTCCCGATGCCATTTGCTCACACTCGCCG
ACCAACAATTATCGTACAAAAAGAGGACACGGGCCTGTATGTTCCTGTGG
TGggtgctttccctccttgaatgggaggaagctCCGGTTTGCAATCactt
cgtcctccgtcccatTTTCACCCACTCGTTGTGCCCGCATTCGTACCCGA
CAGGTCGTCCTACTTGGTTGCTTTCTCTTCATACAGATGCCTTCTCAAAA
GACATTCCGCACTAAGCGGACGCTGGCCAAAAAGCAGAAGCAGAACCGCC
CCATCCCTTACTGGACTCGGCTTCGCACAGGGAACACAATCCGATACAAT
GCCAAGAGGCGCCACTGGCGCCGTACGAAGTTGGGAATCTAAGCCAGGAT
TGAACGTGTTAcacaaggaaagagaggggcgtAACGAGCGACTacaggaa
gagcaagggcatCAAGGGTtgcgggcgaggaagcgatTGAGGTGTCAAGG
GTGGCAGTGTAAGGGAAGTGGGTTAAATACGGGTTCGGTCATAAATTTGA
GGGTCATATGGCCGATCTGGAGTCCGGTGAGATGTTGCCTGCCTGGCAAC
GTGTTTTCAGgcgactggagggagagaagaataAGTCCGAGAAGATTTGA
CCGGGAGAAGCTGGCAATTATTTACGTCTATGCTGCTTTGAACTTCGGCT
CTGACGCATTCCCCTCGTGCCACTGCCTCCCGATGCCATTTGCTCACACT
CGCCGACCAACAATTATCGTACAAAAAGAGGACACGGGCCTGTATGTTCC
TGTGGTGggtgctttccctccttga back to top
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