EWM27993.1, cds2692 (CDS) Nannochloropsis gaditana

Overview
NameEWM27993.1
Unique Namecds2692
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:996350..996365 +
Alignment locationCM002459.1:996566..996668 +
Alignment locationCM002459.1:996855..996958 +
Alignment locationCM002459.1:997189..997244 +
Alignment locationCM002459.1:997348..997773 +

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Properties
Property NameValue
Protein idEWM27993.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100008g71.7885.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:996350..996365 +
CM002459.1supercontigCM002459.1:996566..996668 +
CM002459.1supercontigCM002459.1:996855..996958 +
CM002459.1supercontigCM002459.1:997189..997244 +
CM002459.1supercontigCM002459.1:997348..997773 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27993.1 vs. NCBI_GenBank
Match: gi|585110334|gb|EWM27993.1| (hypothetical protein Naga_100008g71 [Nannochloropsis gaditana])

HSP 1 Score: 480.33 bits (1235), Expect = 1.711e-171
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0 
Query:    1 MGGSSGLQSLRPPSHFHPLVVPAFVPDRSSYLVAFSSYRCLLKRHSALSGRWPKSRSRTAPSLTGLGFAQGTQSDTMPRGATGAVRSWESKPGLNVLHKEREGRNERLQEEQGHQGLRARKRLRCQGWQCKGSGLNTGSVINLRVIWPIWSPVRCCLPGNVFSGDWRERRISPRRFDREKLAIIYVYAALNFGSDAFPSCHCLPMPFAHTRRPTIIVQKEDTGLYVPVVGAFPP 234
            MGGSSGLQSLRPPSHFHPLVVPAFVPDRSSYLVAFSSYRCLLKRHSALSGRWPKSRSRTAPSLTGLGFAQGTQSDTMPRGATGAVRSWESKPGLNVLHKEREGRNERLQEEQGHQGLRARKRLRCQGWQCKGSGLNTGSVINLRVIWPIWSPVRCCLPGNVFSGDWRERRISPRRFDREKLAIIYVYAALNFGSDAFPSCHCLPMPFAHTRRPTIIVQKEDTGLYVPVVGAFPP
Sbjct:    1 MGGSSGLQSLRPPSHFHPLVVPAFVPDRSSYLVAFSSYRCLLKRHSALSGRWPKSRSRTAPSLTGLGFAQGTQSDTMPRGATGAVRSWESKPGLNVLHKEREGRNERLQEEQGHQGLRARKRLRCQGWQCKGSGLNTGSVINLRVIWPIWSPVRCCLPGNVFSGDWRERRISPRRFDREKLAIIYVYAALNFGSDAFPSCHCLPMPFAHTRRPTIIVQKEDTGLYVPVVGAFPP 234
The following BLAST results are available for this feature:
BLAST of EWM27993.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110334|gb|EWM27993.1|1.711e-171100.00hypothetical protein Naga_100008g71 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2700rna2700Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications