|
|
Properties
| Property Name | Value |
|---|
| Product | Lipase, class 3 |
| Orig transcript id | gnl|cribi|Naga_100008g63.7872.mrna |
| Orig protein id | gnl|cribi|Naga_100008g63.7872 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:973902..977226 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2692 ID=rna2692|Name=rna2692|organism=Nannochloropsis gaditana|type=mRNA|length=1200bp
CGCTCGGGCTCCACTGCTTGAACGTGGTCACTCAACCTGCAAAAATAACC
TTTGGAATGCTTTCCACACGGGATTCGATAATCTCCACAGGGCGTTTGCT
CCCGGCCTTGTCTTCCCCTCGTCGCATTCACCGGGACACATTGGTCAAGT
CTTCTTCCTTACAACACGAAATGGAGACATCTTCACCGCCCCGTCTCCAT
TCTGCGGCGTGCCTTATTCAAACCATATATCGGGGACATCGCACACGAAG
ACGGATTTGGCAGGATCCTCTCGCGTCCTACATATCTCTTTCAGCACATA
TCGAAAGGGAGTGTGGCTTTTGGACTTCTTCATCGATGTCTCCTCCTCCT
GACCACATCGTAAGCCAATTCCGGGCACGTACCGTGAGGCGCGCCTTCAA
GAGCTCAACATCATGCTCCAAAACCTCGACAGCCACCCAGGAACACACGA
AGTCCCAGGAAGGCTCGGAAAATTGTCCGTCAGATTCCCGTACGTTGCTT
GGAAGCAATGCTGCTTCCACTGCGACTCCGATGCCTCCACTGCCCTGCTT
GCCTCCTGTCCCGTCCGTTGCGGCCCATCGCAGTCGTGCAGCCATCCTGG
TGGAGCTACGATGGGTGAACAGTAGTCTGCGACAACGTGTGCTGTTTCTT
CGAGCGCAGAGGAAATTACAATCGTTGGGACATCATGAGGATGATACAGG
ACGAGCGATTCACAGGGAGTACTTAGCCCCTGCGGCAGCAAACTAATTGT
CAGGGGGAAGTGAGCAAAAACTGACGGTGGGAGTAGCGCATGACAAGCAC
GAGGCGCTGGCCGACAAATTTTGAGAGAGCATGGGGGGACATTCTGTGGG
GGAAAAGTAACGTGTAGATACTGTCCGGAGAAGAGTGCTCACTCGTGCTG
CTTCTCATTCTATAAAGTGGGAATGCGCGCATCGCTTGTCAAAGTGTACT
GGTGAATGTGGGAGCAGACACAAGGTTCTGAGGCCAAGTCAAATAAATGT
GTTGATCCGCAACCCTTCTTCGGGTTCTCGCGGCTTGCATGGCAGTAAAG
GCACAATTTTACATCAGGCCTGGAAGCAATTCTCGACTACATGAGTTACT
CTATTCCCCTACGCCATTTTAACTGATAGACGCCCACTGAATATCCAGCA
GTTTCTTACACCGTGAGCAGTGAATACAATACAGTCTTACTTTTACGCCG back to topprotein sequence of rna2692 >rna2692-protein ID=rna2692-protein|Name=rna2692|organism=Nannochloropsis gaditana|type=polypeptide|length=883bp
MREKQLNPSRMPYFDRKRRRRAAMASQKYSQCPHTFKTAWLFFLYAIVGC
YLSHTCTAFQPPSSGLLSRRWSARESVPSEVSSVDNAPPTEPVPSTKPTE
PVPSANSLAEPAVPSFLAAWTPPVLPDLSALGGSVSSAAEGANSTLIGLL
QVAQAAMNPRSVTRTFSRQFSKRYLSRWNDKTGLKELVEQTLADLVRVAD
TIDVHSNPRVAAFAARVRTQIETLRRDHDARVIFFFNEEPDIVKEIPILP
ACPFKALSPHDSDQEDEEEVVDPAPLFSPRRVAPGAGVVKKKHGVVRLFK
NLLTLAQHTEPVPEEEDMSWFEAPSSAPDPAVGPAGVEGTMSTSPIAPLP
GSGPVAGAGQSGVDRLLQQVRERMETKAAEERKSEEAVVKAGLRLEFERW
QLLEASRYFSETWAKTRELLMQGGGSASRNNQDGDGAGETDVGAGPSIAA
AAETAASIAMEMVPPQLRALFQEVEGAVAKGLPVKLDLQAWASIVNNVRI
GHRVEPFPQRDWRSSLDLLVSQTPLPDPLLRELNHPLYLHSSLLLATTPY
NVALTKAAETDPALLARTALVASKALGVAPSRLQVHHVVSDKACAVVVVV
PDKRTTYVIFRGTKDPVDVLTDINFLSAPFTPLGWEEEGAGGEREEEEER
GSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRV
TELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELRARLVTFASPA
IGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVS
KSAKELFEEENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTA
LRQRLAAEQQLDSDDFRRENILSGTSLGKESMT back to topmRNA from alignment at CM002459.1:973902..977226+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2692 ID=rna2692|Name=rna2692|organism=Nannochloropsis gaditana|type=mRNA|length=3325bp|location=Sequence derived from alignment at CM002459.1:973902..977226+ (Nannochloropsis gaditana)
GAATCCCGTGTGGAAAGCATTCCAAAGGTTATTTTTGCAGGTTGAGTGAC
CACGTTCAAGCAGTGGAGCccgagcgagggaggaaggcatcgCTAGAACA
AGGAAAAACCGGCGGAAGTCCGCCTTTAGACACTGTTTTAATCACTTTAT
TTGGTGCGCACACGCCTTCAGAAATACTCACGTTGGACACCACATCACAC
AGCTCGTACTTCGTCTATGCGTGACATGCCAGCGCGTGTCTGTCCTGCAT
CATGAGGGAAAAGCAGCTCAATCCTTCGAGAATGCCCTACTTTGACCGAA
AGCGACGAAGACGTGCTGCCATGGCATCACAAAAATACTCACAATGCCCT
CACACTTTCAAAACTGCTTGGCTATTTTTCCTGTACGCGATCGTCGGGTG
CTATTTATCCCACACATGCACCGCATTTCAACCTCCCTCGTCcggcctcc
tttctcggCGGTGGAGTGCCCGGGAGTCAGTGCCCTCCGAGGTCTCCTCC
GTCGACAACGCTCCGCCCACAGAACCAGTCCCATCCACGAAACCCACGGA
ACCAGTCCCATCCGCGAACTCGTTGGCAGAGCCTGCTGTACCGTCTTTTT
TGGCGGCATGGACTCCCCCGGTCTTGCCCGACCTCAGTGCGTTGGGGGGT
AGTGTCAGCTCAGCCGCAGAGGGGGCAAACTCGACGCTTATCGGCTTGTT
GCAAGTCGCGCAAGCTGCGATGAACCCACGCTCTGTCACTCGCACTTTCT
CCCGTCAGTTTTCGAAACGATATTTGTCGAGATGGAACGACAAGACGGGG
CTGAAGGAGCTTGTGGAGCAGACCTTGGCAGATCTTGTCAGGGTGGCGGA
CACCATTGACGTGCATTCGAACCCCAGAGTGGCCGCTTTCGCCGCGCGTG
TGCGCACGCAGATCGAGACATTGCGGAGAGACCACGACGCCAGggtcatc
ttcttctttaACGAGGAGCCGGACATAGTCAAGGAgattcccatcctccc
cgcgTGCCCCTTCAAGGCTCTTTCGCCCCACGACTCggaccaggaggacg
aggaggaagtcgtggaccccgcccctcttttcaGTCCGCGCCGCGTCGCA
CCCGGGGCGGGTGtggtgaagaagaagcacGGTGTTGTCCGTTTGTTCAA
GAATCTTCTGACATTGGCCCAGCACACGGAGCCCgtgcccgaggaggagg
acatgagtTGGTTCGAagctccctcttctgcccCGGACCCTGCGGTGGGC
CCTGCGGGTGTAGAGGGCACCATGTCCACATCGCCCATCGCCCCACTGCC
AGGCTCGGGGCCTGTGGCTGGAGCAGGGCAGAGCGGAGTGGACCGCCTGT
TGCAGCAGGTACGGGAGCGCATGGAGACGAAggccgcggaggagcgaaag
agcgaggaggcggtcgtTAAGGCGGGTTTGCGCCTGGAATTTGAGCGGTG
GCAGCTTCTGGAGGCCAGCCGGTATTTCAGCGAGACATGGGCCAAGACCC
GGGAGCTTCTGatgcaaggggggggaagtgccTCCAGGAACAATCAAGAC
GGCGACGGCGCCGGCGAGACCGACGTTGGGGCGGGACCCTCCATCGCAGC
GGCCGCGGAGACCGCTGCTTCCATCGCCATGGAAATGGTGCCTCCGCAAC
TTCGCGCGCTTTTccaagaggtggaaggggccgTCGCCAAGGGCCTGCCC
GTCAAGCTCGACCTTCAGGCCTGGGCCTCGATCGTGAACAACGTCAGGAT
CGGCCATCGCGTCGAGCCCTTCCCTCAACGTGACTGGCGGAGCAGCCTGG
ATCTACTGGTTTCCCAAACCCCGCTGCCAGACCCCCTGCTACGGGAACTC
AACCAccccctctacctccactcctcccttctcctggCCACCACTCCCTA
CAACGTGGCGCTGACCAAGGCCGCGGAGACCGACCCTGCCCTCTTGGCAC
GGACCGCGCTCGTCGCGTCCAAAGCATTGGGGGTCGcaccctcccgcctg
caGGTCCACCACGTGGTGTCGGACAAGGCGTGTGCGGTCGTAGTGGTTGT
GCCGGACAAGCGCACCACCTACGTCATCTTCCGAGGGACCAAGGACCCGG
TCGACGTCCTGACCGACATCAATTTCCTCTCGGCGCCCTTCACGCCCTTg
gggtgggaagaagagggggcagggggggagagagaggaagaggaagagag
gggctcGGCCGTGGGCTTCCTGCCCTTCATTGACCCCAACAATGCCGCAC
AGGAACAGTTGCAACTCATGGCGGGGACGGACGACGCAACGGGCACCCTG
AAAGTCCACGGGGGGTTCAAGCTGGCCTTCGACTCGATCAAACAGCGTGT
GACGGAGctcctcctggacgaggacggcgcgGGAAGCGCGACCGACAGTG
TCGTCTTTGTGGGACATAGCATGGGGGGGGCTTTGGCGCAGCTTGCCACC
GTCTACTTCTGTGAACTGAGAGCACGCTTGGTCACTTTCGCTTCCCCCGC
TATCGGAAACGCTGCCTTTTGTCGCTTGCTAGATTGCTGTGGGCAGCCGT
ACGGAGGTCTGCGGGTTTGGAATGACTTTGACGTGGTCCCTTCTATAGCC
CAGTTGGTAGGCTATCGACATGCAGGCGTGCCAATTAAGCTCGATGTCTC
CAAATCCGCAAAGGAGCTCTTTGAGGAAGAGAACGTGAATTCCCTGCGGG
GGCTAATTGACTTTCTGGCGCCGCATGTCATGTTTCAACTGGGGAGTGTG
TGCTTCGTATTTCCTGTGATAGGATGGGATCTTCAGTCGGGGGGGACGGC
GTTGAGGCAACGGCTGGCGGCTGAGCAACAACTGGATTCGGATGATTTTA
GGCGGGAGAATATTTTGTCGGGAACGTCCTTAGGGAAAGAGAGTATGACG
TAGGCCTAGATGATCTGTGTACATACAATCATGCTATGTATGTGACTGAA
TGTCAAAGCCAATATGCTGAAAGAGAGGTGGGCGTTAAAGTAAGGTGTGG
GAGCAATTGAGATACGTTTCTGACATTTACATGTAAGAGCGCCTTAGCGT
GTACATTGACGACTCAGAGCATTTGAGCGAAGGTGAAGAACAAACCGCAG
CGCCAAGAGGCGTCCGCATCGTGGATCCGCGCACGGCAAGGTGCACGAGT
TGCTCAATCGTTCAGCACGTTATAACTTTACTTGAACTGTTCTTTGTTAA
CGGTGGTAAATGTTGCATAGAAAGACCCAAAGTATCGTTGGAAATCGCTT
TGTTGGGCTAGGTGCCCTTGATGCCGATGAGCTTAAGCTTTTTGCTCTAC
ACGAGATCTGGCTGATGTTGATGGT back to topCoding sequence (CDS) from alignment at CM002459.1:973902..977226+ >rna2692 ID=rna2692|Name=rna2692|organism=Nannochloropsis gaditana|type=CDS|length=2652bp|location=Sequence derived from alignment at CM002459.1:973902..977226+ (Nannochloropsis gaditana)
ATGAGGGAAAAGCAGCTCAATCCTTCGAGAATGCCCTACTTTGACCGAAA
GCGACGAAGACGTGCTGCCATGGCATCACAAAAATACTCACAATGCCCTC
ACACTTTCAAAACTGCTTGGCTATTTTTCCTGTACGCGATCGTCGGGTGC
TATTTATCCCACACATGCACCGCATTTCAACCTCCCTCGTCcggcctcct
ttctcggCGGTGGAGTGCCCGGGAGTCAGTGCCCTCCGAGGTCTCCTCCG
TCGACAACGCTCCGCCCACAGAACCAGTCCCATCCACGAAACCCACGGAA
CCAGTCCCATCCGCGAACTCGTTGGCAGAGCCTGCTGTACCGTCTTTTTT
GGCGGCATGGACTCCCCCGGTCTTGCCCGACCTCAGTGCGTTGGGGGGTA
GTGTCAGCTCAGCCGCAGAGGGGGCAAACTCGACGCTTATCGGCTTGTTG
CAAGTCGCGCAAGCTGCGATGAACCCACGCTCTGTCACTCGCACTTTCTC
CCGTCAGTTTTCGAAACGATATTTGTCGAGATGGAACGACAAGACGGGGC
TGAAGGAGCTTGTGGAGCAGACCTTGGCAGATCTTGTCAGGGTGGCGGAC
ACCATTGACGTGCATTCGAACCCCAGAGTGGCCGCTTTCGCCGCGCGTGT
GCGCACGCAGATCGAGACATTGCGGAGAGACCACGACGCCAGggtcatct
tcttctttaACGAGGAGCCGGACATAGTCAAGGAgattcccatcctcccc
gcgTGCCCCTTCAAGGCTCTTTCGCCCCACGACTCggaccaggaggacga
ggaggaagtcgtggaccccgcccctcttttcaGTCCGCGCCGCGTCGCAC
CCGGGGCGGGTGtggtgaagaagaagcacGGTGTTGTCCGTTTGTTCAAG
AATCTTCTGACATTGGCCCAGCACACGGAGCCCgtgcccgaggaggagga
catgagtTGGTTCGAagctccctcttctgcccCGGACCCTGCGGTGGGCC
CTGCGGGTGTAGAGGGCACCATGTCCACATCGCCCATCGCCCCACTGCCA
GGCTCGGGGCCTGTGGCTGGAGCAGGGCAGAGCGGAGTGGACCGCCTGTT
GCAGCAGGTACGGGAGCGCATGGAGACGAAggccgcggaggagcgaaaga
gcgaggaggcggtcgtTAAGGCGGGTTTGCGCCTGGAATTTGAGCGGTGG
CAGCTTCTGGAGGCCAGCCGGTATTTCAGCGAGACATGGGCCAAGACCCG
GGAGCTTCTGatgcaaggggggggaagtgccTCCAGGAACAATCAAGACG
GCGACGGCGCCGGCGAGACCGACGTTGGGGCGGGACCCTCCATCGCAGCG
GCCGCGGAGACCGCTGCTTCCATCGCCATGGAAATGGTGCCTCCGCAACT
TCGCGCGCTTTTccaagaggtggaaggggccgTCGCCAAGGGCCTGCCCG
TCAAGCTCGACCTTCAGGCCTGGGCCTCGATCGTGAACAACGTCAGGATC
GGCCATCGCGTCGAGCCCTTCCCTCAACGTGACTGGCGGAGCAGCCTGGA
TCTACTGGTTTCCCAAACCCCGCTGCCAGACCCCCTGCTACGGGAACTCA
ACCAccccctctacctccactcctcccttctcctggCCACCACTCCCTAC
AACGTGGCGCTGACCAAGGCCGCGGAGACCGACCCTGCCCTCTTGGCACG
GACCGCGCTCGTCGCGTCCAAAGCATTGGGGGTCGcaccctcccgcctgc
aGGTCCACCACGTGGTGTCGGACAAGGCGTGTGCGGTCGTAGTGGTTGTG
CCGGACAAGCGCACCACCTACGTCATCTTCCGAGGGACCAAGGACCCGGT
CGACGTCCTGACCGACATCAATTTCCTCTCGGCGCCCTTCACGCCCTTgg
ggtgggaagaagagggggcagggggggagagagaggaagaggaagagagg
ggctcGGCCGTGGGCTTCCTGCCCTTCATTGACCCCAACAATGCCGCACA
GGAACAGTTGCAACTCATGGCGGGGACGGACGACGCAACGGGCACCCTGA
AAGTCCACGGGGGGTTCAAGCTGGCCTTCGACTCGATCAAACAGCGTGTG
ACGGAGctcctcctggacgaggacggcgcgGGAAGCGCGACCGACAGTGT
CGTCTTTGTGGGACATAGCATGGGGGGGGCTTTGGCGCAGCTTGCCACCG
TCTACTTCTGTGAACTGAGAGCACGCTTGGTCACTTTCGCTTCCCCCGCT
ATCGGAAACGCTGCCTTTTGTCGCTTGCTAGATTGCTGTGGGCAGCCGTA
CGGAGGTCTGCGGGTTTGGAATGACTTTGACGTGGTCCCTTCTATAGCCC
AGTTGGTAGGCTATCGACATGCAGGCGTGCCAATTAAGCTCGATGTCTCC
AAATCCGCAAAGGAGCTCTTTGAGGAAGAGAACGTGAATTCCCTGCGGGG
GCTAATTGACTTTCTGGCGCCGCATGTCATGTTTCAACTGGGGAGTGTGT
GCTTCGTATTTCCTGTGATAGGATGGGATCTTCAGTCGGGGGGGACGGCG
TTGAGGCAACGGCTGGCGGCTGAGCAACAACTGGATTCGGATGATTTTAG
GCGGGAGAATATTTTGTCGGGAACGTCCTTAGGGAAAGAGAGTATGACGT
AG back to top
|