EWM27980.1, cds2684 (CDS) Nannochloropsis gaditana

Overview
NameEWM27980.1
Unique Namecds2684
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:974153..976804 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27980.1
ProductLipase, class 3
Orig transcript idgnl|cribi|Naga_100008g63.7872.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:974153..976804 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR002921Fungal_lipase-like
Homology
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|585110321|gb|EWM27980.1| (Lipase, class 3 [Nannochloropsis gaditana])

HSP 1 Score: 1803.49 bits (4670), Expect = 0.000e+0
Identity = 883/883 (100.00%), Postives = 883/883 (100.00%), Query Frame = 0
Query:    1 MREKQLNPSRMPYFDRKRRRRAAMASQKYSQCPHTFKTAWLFFLYAIVGCYLSHTCTAFQPPSSGLLSRRWSARESVPSEVSSVDNAPPTEPVPSTKPTEPVPSANSLAEPAVPSFLAAWTPPVLPDLSALGGSVSSAAEGANSTLIGLLQVAQAAMNPRSVTRTFSRQFSKRYLSRWNDKTGLKELVEQTLADLVRVADTIDVHSNPRVAAFAARVRTQIETLRRDHDARVIFFFNEEPDIVKEIPILPACPFKALSPHDSDQEDEEEVVDPAPLFSPRRVAPGAGVVKKKHGVVRLFKNLLTLAQHTEPVPEEEDMSWFEAPSSAPDPAVGPAGVEGTMSTSPIAPLPGSGPVAGAGQSGVDRLLQQVRERMETKAAEERKSEEAVVKAGLRLEFERWQLLEASRYFSETWAKTRELLMQGGGSASRNNQDGDGAGETDVGAGPSIAAAAETAASIAMEMVPPQLRALFQEVEGAVAKGLPVKLDLQAWASIVNNVRIGHRVEPFPQRDWRSSLDLLVSQTPLPDPLLRELNHPLYLHSSLLLATTPYNVALTKAAETDPALLARTALVASKALGVAPSRLQVHHVVSDKACAVVVVVPDKRTTYVIFRGTKDPVDVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSKSAKELFEEENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTALRQRLAAEQQLDSDDFRRENILSGTSLGKESMT 883
            MREKQLNPSRMPYFDRKRRRRAAMASQKYSQCPHTFKTAWLFFLYAIVGCYLSHTCTAFQPPSSGLLSRRWSARESVPSEVSSVDNAPPTEPVPSTKPTEPVPSANSLAEPAVPSFLAAWTPPVLPDLSALGGSVSSAAEGANSTLIGLLQVAQAAMNPRSVTRTFSRQFSKRYLSRWNDKTGLKELVEQTLADLVRVADTIDVHSNPRVAAFAARVRTQIETLRRDHDARVIFFFNEEPDIVKEIPILPACPFKALSPHDSDQEDEEEVVDPAPLFSPRRVAPGAGVVKKKHGVVRLFKNLLTLAQHTEPVPEEEDMSWFEAPSSAPDPAVGPAGVEGTMSTSPIAPLPGSGPVAGAGQSGVDRLLQQVRERMETKAAEERKSEEAVVKAGLRLEFERWQLLEASRYFSETWAKTRELLMQGGGSASRNNQDGDGAGETDVGAGPSIAAAAETAASIAMEMVPPQLRALFQEVEGAVAKGLPVKLDLQAWASIVNNVRIGHRVEPFPQRDWRSSLDLLVSQTPLPDPLLRELNHPLYLHSSLLLATTPYNVALTKAAETDPALLARTALVASKALGVAPSRLQVHHVVSDKACAVVVVVPDKRTTYVIFRGTKDPVDVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSKSAKELFEEENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTALRQRLAAEQQLDSDDFRRENILSGTSLGKESMT
Sbjct:    1 MREKQLNPSRMPYFDRKRRRRAAMASQKYSQCPHTFKTAWLFFLYAIVGCYLSHTCTAFQPPSSGLLSRRWSARESVPSEVSSVDNAPPTEPVPSTKPTEPVPSANSLAEPAVPSFLAAWTPPVLPDLSALGGSVSSAAEGANSTLIGLLQVAQAAMNPRSVTRTFSRQFSKRYLSRWNDKTGLKELVEQTLADLVRVADTIDVHSNPRVAAFAARVRTQIETLRRDHDARVIFFFNEEPDIVKEIPILPACPFKALSPHDSDQEDEEEVVDPAPLFSPRRVAPGAGVVKKKHGVVRLFKNLLTLAQHTEPVPEEEDMSWFEAPSSAPDPAVGPAGVEGTMSTSPIAPLPGSGPVAGAGQSGVDRLLQQVRERMETKAAEERKSEEAVVKAGLRLEFERWQLLEASRYFSETWAKTRELLMQGGGSASRNNQDGDGAGETDVGAGPSIAAAAETAASIAMEMVPPQLRALFQEVEGAVAKGLPVKLDLQAWASIVNNVRIGHRVEPFPQRDWRSSLDLLVSQTPLPDPLLRELNHPLYLHSSLLLATTPYNVALTKAAETDPALLARTALVASKALGVAPSRLQVHHVVSDKACAVVVVVPDKRTTYVIFRGTKDPVDVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSKSAKELFEEENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTALRQRLAAEQQLDSDDFRRENILSGTSLGKESMT 883          
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|873229508|emb|CEM12972.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 234.958 bits (598), Expect = 1.970e-60
Identity = 147/339 (43.36%), Postives = 190/339 (56.05%), Query Frame = 0
Query:  570 LVASKALGVAPSR--LQVHHVVSDKACAVVVVVPDKRTTYVIFRGTKDPVDVLTDINFLSAPFTP------------------LGWEEEGAGGEREE----------EEERGSAVGFLPFI-------DPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLD---EDGAGSAT---DSVVFVGHSMGGALAQLATVYFCELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSKSAKELFEEENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTALRQRLAAEQQLDSDD 865
            L+  KA+ V   +  + VH VVSDKACAV+ V P    T V FRGTKDPVDVLTDI F+SAPF P                  +       G   ++          E  R S +  L            + A + + +  A   D+  T++VH GF +AF+SI+  V+ +L      D AG        VVFVGHS+GGALA LA VYF +LR RLVTFA+PA GN AFCR L+   +PYGGLRVWN+ DVVP IAQLVGY HAG+PIK  + +SA   FE+ENV  + G    +APHV+FQ+G   +VFP+I  D++S   A +    A QQ  +D+
Sbjct:  964 LLMKKAIEVEKGKGDVAVHTVVSDKACAVIGVSPSLNLTVVSFRGTKDPVDVLTDIQFISAPFKPRNVPRGHRSRIPVSVPVRMAHHPHHPGAPAKDGSTSMDAAAREPRRASLLASLGLRFRGIRHGRAHFAKEREAEPTASAADSN-TMEVHRGFAMAFESIRDEVSSILNRYSYTDPAGGHRRFPHEVVFVGHSLGGALAHLAAVYFHDLRPRLVTFAAPATGNLAFCRCLEQVARPYGGLRVWNEGDVVPYIAQLVGYSHAGIPIKCRLPRSAIMKFEQENVGPVFGF-RVVAPHVLFQVGPAVYVFPIITQDVRSASEAAK----AAQQETADE 1296          
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|1004137650|gb|KXZ45673.1| (hypothetical protein GPECTOR_52g70 [Gonium pectorale])

HSP 1 Score: 82.4185 bits (202), Expect = 1.764e-12
Identity = 66/203 (32.51%), Postives = 94/203 (46.31%), Query Frame = 0
Query:  608 VIFRGTK-DPV-DVLTDINFLSAPFTPLGWEEEGAGG---EREEEEERGSAVGFLPFIDPNNAAQEQLQLMAG--TDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELR------ARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKL 797
            + FRGT+ D V DV TD+  L     P  W +E   G   E EE+E +  A       +   A Q    + A     D +G L VHGGF  ++DS++  V  LL +          V+  GHS+GGALA L      EL+        + T+ +P +GN AF    +         R  ND D+VP + +L+G+ H G P+ L
Sbjct:  388 IAFRGTQMDRVKDVFTDLGLL-----PTRWNDEAHDGLEAEHEEDETKTKAHEEGTVGNKTTAFQPAATMAAKGKVHDRSGQL-VHGGFHFSYDSVRDTVFGLLDEIRATRPGPWRVLVTGHSLGGALATLGAYELAELKLPADPPVVMYTYGAPRVGNKAFAEAFNALVPD--AFRCANDDDIVPRVPRLMGFCHVGTPVLL 582          
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|302844632|ref|XP_002953856.1| (hypothetical protein VOLCADRAFT_94625 [Volvox carteri f. nagariensis] >gi|300260964|gb|EFJ45180.1| hypothetical protein VOLCADRAFT_94625, partial [Volvox carteri f. nagariensis])

HSP 1 Score: 76.6406 bits (187), Expect = 1.572e-10
Identity = 68/224 (30.36%), Postives = 93/224 (41.52%), Query Frame = 0
Query:  602 DKRTTYVIFRGTKDPV--DVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPF----IDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDS--VVFVGHSMGGALAQLATVYFCEL-------------------RARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLD 798
            + R   V FRGT+     D+ TD+N       P          ER ++ E       LPF    I   +   +Q     G         VH GF  A+DS+++ V  LL +  GAG   D+  V+  GHS+GGALA LA     E                       L TF +P +GN AF    D         RV N  D++PS+ +L+GY H G  ++LD
Sbjct:  366 EAREAVVAFRGTEQVKWKDIATDLNLTPCSLNP----------ERLDDNEG------LPFTARIIKAVSGVYQQQVSGRGGGVGVVRFMVHKGFLSAYDSVRRTVFTLLDEITGAGDKGDNWRVLVTGHSLGGALATLAAYELAERRPLPPPRPPITLTPARSVQNITLYTFGAPRVGNKAFAEEFDRLVPD--AWRVTNSNDIIPSVPRLMGYCHVGHAVRLD 571          
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|1004137654|gb|KXZ45677.1| (hypothetical protein GPECTOR_52g74 [Gonium pectorale])

HSP 1 Score: 75.485 bits (184), Expect = 2.400e-10
Identity = 64/208 (30.77%), Postives = 89/208 (42.79%), Query Frame = 0
Query:  602 DKRTTYVIFRGTKDPV--DVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATD--SVVFVGHSMGGALAQLATVYFCELRA--------RLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKL 797
            + R   + FRGT+     D+ TD+N   A   P             E  +  + + F   I    +   Q QLM           VH GF  A+DS+K+ V  LL    G+G       V+  GHS+GGALA LA     E R          L T+ +P +GN AF    D         RV N  D++PS+ +L+GY H G  ++L
Sbjct:  321 EAREAVIAFRGTEQVKWKDIATDLNLTPASLNP-------------ERLDDNAGLPFTARIFKAVSGANQNQLM-----------VHKGFLDAYDSVKRAVFTLLDAVTGSGERGGPWRVLVTGHSLGGALATLAAYELAERRCPARTVQQISLYTYGAPRVGNKAFAEAFDRVVPDT--WRVTNANDIIPSVPRLMGYCHVGHAVRL 502          
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|1004137651|gb|KXZ45674.1| (hypothetical protein GPECTOR_52g71 [Gonium pectorale])

HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-9
Identity = 43/123 (34.96%), Postives = 59/123 (47.97%), Query Frame = 0
Query:  685 VHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELR------ARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSK 801
            VHGGF  ++DS++  V  LL +          V   GHS+GGALA LA     E R        + T+ +P +GN AF    +         R  ND DVVP + +L+G+ H G P+ L   K
Sbjct:  493 VHGGFHFSYDSVRDTVFGLLDEMRATRPGPWRVYVTGHSLGGALATLAAYELAERRLPADPPVVMYTYGAPRVGNKAFAEAFNALVP--DAFRCTNDKDVVPRVPRLMGFCHVGTPVLLAEGK 613          
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|301119715|ref|XP_002907585.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262106097|gb|EEY64149.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 70.4774 bits (171), Expect = 1.130e-8
Identity = 50/125 (40.00%), Postives = 67/125 (53.60%), Query Frame = 0
Query:  684 KVHGGFKLAFDSIK---QRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLA----TVYFCELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVG-YRHAGVPIKLDVS 800
            +VH GF LA++SI+   + VT L+LDE+       SV   GHSMGGALA +A     V F  ++  +  F  P +GN +F +  D C       RV  D D+VP   +  G Y+H G  I LDVS
Sbjct:  753 RVHRGFWLAYESIQDELKEVTRLILDENPG----ISVYITGHSMGGALAVIAAYDLAVNF-SIKVNMYNFGGPRVGNPSFRQHYDSCVPT--SYRVVMDGDIVPGWPRFWGLYQHVGTEISLDVS 870          
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|1004137652|gb|KXZ45675.1| (hypothetical protein GPECTOR_52g72 [Gonium pectorale])

HSP 1 Score: 70.0922 bits (170), Expect = 1.328e-8
Identity = 42/128 (32.81%), Postives = 62/128 (48.44%), Query Frame = 0
Query:  675 GTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFV-GHSMGGALAQLATVYFCE----LRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKL 797
            G       + VH GF+LA DS+      +L    GAG A +  V+V GHS+GGALA L      +     +  + ++  P +GN AF    +         R  N+ D VP + +L+GY H G P++L
Sbjct:  551 GVTSGNRKMNVHKGFRLAHDSVWDNTLAVLKTVTGAGPAANWHVYVTGHSLGGALATLGAYKLAKSGVVKKVSMYSYGQPRVGNKAFADEFNALIS--NAWRFANENDAVPRVPRLMGYCHVGKPVQL 676          
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|926764384|ref|XP_013891244.1| (Lipase [Monoraphidium neglectum] >gi|761956943|gb|KIY92224.1| Lipase [Monoraphidium neglectum])

HSP 1 Score: 63.1586 bits (152), Expect = 2.336e-8
Identity = 41/118 (34.75%), Postives = 58/118 (49.15%), Query Frame = 0
Query:  685 VHGGFKLAFDSIKQRVTELL--LDEDGAGSATDSVVFVGHSMGGALAQLATVYFC---------ELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHA 791
            VH GF  A+DS+K +V  L+  + E    S    V   GHS+GGA+A L                L   + TF +P +GN AF ++ D         R+ N  D+VPS+ +L+GY HA
Sbjct:    2 VHSGFLNAYDSVKVKVFTLVDQITESATPSKPWRVRITGHSLGGAIATLCAYDLSARPPKTGAGSLEVSMYTFGAPRVGNKAFAKVFDERLHNRA-WRITNASDIVPSVPRLMGYSHA 118          
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|303282807|ref|XP_003060695.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226458166|gb|EEH55464.1| predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 69.3218 bits (168), Expect = 2.399e-8
Identity = 80/293 (27.30%), Postives = 119/293 (40.61%), Query Frame = 0
Query:  585 VHHVVSDKACAVVVVVPDKRTTYVI-FRGT--KDPVDVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGS-----------ATDSVVFVGHSMGGALAQLATVYFCE-LRAR-------LVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSKSAKELFEEENV----NSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTAL 851
            V +  +D   AV   V  K  T V+ FRGT  +   DVLTD N   + F P       +GG+ + EE         P                          VHGGF  A+DS++ RV   + D   A S           A   V   GHS+GGALA L +    E + AR       +  + SP +GN AF +  +        +RV N  D+VP++  L+GYRH    +++  + + + L    +V    ++  G  D      + +L     V  V+G D +S   A+
Sbjct:  369 VENARTDTQAAVWRNVSSKSKTVVVSFRGTEMRSAKDVLTDANLTPSSFNPERLTGGESGGDIDAEE---------PM-------------------------VHGGFLAAYDSVRARVFAAVDDVMRARSPDYDDDDDDDDAAWHVFVTGHSLGGALATLFSYELAESVNARRRRCTTTMYNYGSPRVGNRAFVKRFNALVPD--SIRVINGSDLVPTLPALLGYRHVDHGVRIP-ANAGEALVGAGDVRASSSAENGTTDVAVGAKIVELAEAMGVRNVLGVDEESASDAV 624          
The following BLAST results are available for this feature:
BLAST of EWM27980.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110321|gb|EWM27980.1|0.000e+0100.00Lipase, class 3 [Nannochloropsis gaditana][more]
gi|873229508|emb|CEM12972.1|1.970e-6043.36unnamed protein product [Vitrella brassicaformis C... [more]
gi|1004137650|gb|KXZ45673.1|1.764e-1232.51hypothetical protein GPECTOR_52g70 [Gonium pectora... [more]
gi|302844632|ref|XP_002953856.1|1.572e-1030.36hypothetical protein VOLCADRAFT_94625 [Volvox cart... [more]
gi|1004137654|gb|KXZ45677.1|2.400e-1030.77hypothetical protein GPECTOR_52g74 [Gonium pectora... [more]
gi|1004137651|gb|KXZ45674.1|3.372e-934.96hypothetical protein GPECTOR_52g71 [Gonium pectora... [more]
gi|301119715|ref|XP_002907585.1|1.130e-840.00conserved hypothetical protein [Phytophthora infes... [more]
gi|1004137652|gb|KXZ45675.1|1.328e-832.81hypothetical protein GPECTOR_52g72 [Gonium pectora... [more]
gi|926764384|ref|XP_013891244.1|2.336e-834.75Lipase [Monoraphidium neglectum] >gi|761956943|gb|... [more]
gi|303282807|ref|XP_003060695.1|2.399e-827.30predicted protein [Micromonas pusilla CCMP1545] >g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2692rna2692Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications