EWM27980.1, cds2684 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|585110321|gb|EWM27980.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 1803.49 bits (4670), Expect = 0.000e+0 Identity = 883/883 (100.00%), Postives = 883/883 (100.00%), Query Frame = 0
Query: 1 MREKQLNPSRMPYFDRKRRRRAAMASQKYSQCPHTFKTAWLFFLYAIVGCYLSHTCTAFQPPSSGLLSRRWSARESVPSEVSSVDNAPPTEPVPSTKPTEPVPSANSLAEPAVPSFLAAWTPPVLPDLSALGGSVSSAAEGANSTLIGLLQVAQAAMNPRSVTRTFSRQFSKRYLSRWNDKTGLKELVEQTLADLVRVADTIDVHSNPRVAAFAARVRTQIETLRRDHDARVIFFFNEEPDIVKEIPILPACPFKALSPHDSDQEDEEEVVDPAPLFSPRRVAPGAGVVKKKHGVVRLFKNLLTLAQHTEPVPEEEDMSWFEAPSSAPDPAVGPAGVEGTMSTSPIAPLPGSGPVAGAGQSGVDRLLQQVRERMETKAAEERKSEEAVVKAGLRLEFERWQLLEASRYFSETWAKTRELLMQGGGSASRNNQDGDGAGETDVGAGPSIAAAAETAASIAMEMVPPQLRALFQEVEGAVAKGLPVKLDLQAWASIVNNVRIGHRVEPFPQRDWRSSLDLLVSQTPLPDPLLRELNHPLYLHSSLLLATTPYNVALTKAAETDPALLARTALVASKALGVAPSRLQVHHVVSDKACAVVVVVPDKRTTYVIFRGTKDPVDVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSKSAKELFEEENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTALRQRLAAEQQLDSDDFRRENILSGTSLGKESMT 883
MREKQLNPSRMPYFDRKRRRRAAMASQKYSQCPHTFKTAWLFFLYAIVGCYLSHTCTAFQPPSSGLLSRRWSARESVPSEVSSVDNAPPTEPVPSTKPTEPVPSANSLAEPAVPSFLAAWTPPVLPDLSALGGSVSSAAEGANSTLIGLLQVAQAAMNPRSVTRTFSRQFSKRYLSRWNDKTGLKELVEQTLADLVRVADTIDVHSNPRVAAFAARVRTQIETLRRDHDARVIFFFNEEPDIVKEIPILPACPFKALSPHDSDQEDEEEVVDPAPLFSPRRVAPGAGVVKKKHGVVRLFKNLLTLAQHTEPVPEEEDMSWFEAPSSAPDPAVGPAGVEGTMSTSPIAPLPGSGPVAGAGQSGVDRLLQQVRERMETKAAEERKSEEAVVKAGLRLEFERWQLLEASRYFSETWAKTRELLMQGGGSASRNNQDGDGAGETDVGAGPSIAAAAETAASIAMEMVPPQLRALFQEVEGAVAKGLPVKLDLQAWASIVNNVRIGHRVEPFPQRDWRSSLDLLVSQTPLPDPLLRELNHPLYLHSSLLLATTPYNVALTKAAETDPALLARTALVASKALGVAPSRLQVHHVVSDKACAVVVVVPDKRTTYVIFRGTKDPVDVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSKSAKELFEEENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTALRQRLAAEQQLDSDDFRRENILSGTSLGKESMT
Sbjct: 1 MREKQLNPSRMPYFDRKRRRRAAMASQKYSQCPHTFKTAWLFFLYAIVGCYLSHTCTAFQPPSSGLLSRRWSARESVPSEVSSVDNAPPTEPVPSTKPTEPVPSANSLAEPAVPSFLAAWTPPVLPDLSALGGSVSSAAEGANSTLIGLLQVAQAAMNPRSVTRTFSRQFSKRYLSRWNDKTGLKELVEQTLADLVRVADTIDVHSNPRVAAFAARVRTQIETLRRDHDARVIFFFNEEPDIVKEIPILPACPFKALSPHDSDQEDEEEVVDPAPLFSPRRVAPGAGVVKKKHGVVRLFKNLLTLAQHTEPVPEEEDMSWFEAPSSAPDPAVGPAGVEGTMSTSPIAPLPGSGPVAGAGQSGVDRLLQQVRERMETKAAEERKSEEAVVKAGLRLEFERWQLLEASRYFSETWAKTRELLMQGGGSASRNNQDGDGAGETDVGAGPSIAAAAETAASIAMEMVPPQLRALFQEVEGAVAKGLPVKLDLQAWASIVNNVRIGHRVEPFPQRDWRSSLDLLVSQTPLPDPLLRELNHPLYLHSSLLLATTPYNVALTKAAETDPALLARTALVASKALGVAPSRLQVHHVVSDKACAVVVVVPDKRTTYVIFRGTKDPVDVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSKSAKELFEEENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTALRQRLAAEQQLDSDDFRRENILSGTSLGKESMT 883
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|873229508|emb|CEM12972.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 234.958 bits (598), Expect = 1.970e-60 Identity = 147/339 (43.36%), Postives = 190/339 (56.05%), Query Frame = 0
Query: 570 LVASKALGVAPSR--LQVHHVVSDKACAVVVVVPDKRTTYVIFRGTKDPVDVLTDINFLSAPFTP------------------LGWEEEGAGGEREE----------EEERGSAVGFLPFI-------DPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLD---EDGAGSAT---DSVVFVGHSMGGALAQLATVYFCELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSKSAKELFEEENVNSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTALRQRLAAEQQLDSDD 865
L+ KA+ V + + VH VVSDKACAV+ V P T V FRGTKDPVDVLTDI F+SAPF P + G ++ E R S + L + A + + + A D+ T++VH GF +AF+SI+ V+ +L D AG VVFVGHS+GGALA LA VYF +LR RLVTFA+PA GN AFCR L+ +PYGGLRVWN+ DVVP IAQLVGY HAG+PIK + +SA FE+ENV + G +APHV+FQ+G +VFP+I D++S A + A QQ +D+
Sbjct: 964 LLMKKAIEVEKGKGDVAVHTVVSDKACAVIGVSPSLNLTVVSFRGTKDPVDVLTDIQFISAPFKPRNVPRGHRSRIPVSVPVRMAHHPHHPGAPAKDGSTSMDAAAREPRRASLLASLGLRFRGIRHGRAHFAKEREAEPTASAADSN-TMEVHRGFAMAFESIRDEVSSILNRYSYTDPAGGHRRFPHEVVFVGHSLGGALAHLAAVYFHDLRPRLVTFAAPATGNLAFCRCLEQVARPYGGLRVWNEGDVVPYIAQLVGYSHAGIPIKCRLPRSAIMKFEQENVGPVFGF-RVVAPHVLFQVGPAVYVFPIITQDVRSASEAAK----AAQQETADE 1296
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|1004137650|gb|KXZ45673.1| (hypothetical protein GPECTOR_52g70 [Gonium pectorale]) HSP 1 Score: 82.4185 bits (202), Expect = 1.764e-12 Identity = 66/203 (32.51%), Postives = 94/203 (46.31%), Query Frame = 0
Query: 608 VIFRGTK-DPV-DVLTDINFLSAPFTPLGWEEEGAGG---EREEEEERGSAVGFLPFIDPNNAAQEQLQLMAG--TDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELR------ARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKL 797
+ FRGT+ D V DV TD+ L P W +E G E EE+E + A + A Q + A D +G L VHGGF ++DS++ V LL + V+ GHS+GGALA L EL+ + T+ +P +GN AF + R ND D+VP + +L+G+ H G P+ L
Sbjct: 388 IAFRGTQMDRVKDVFTDLGLL-----PTRWNDEAHDGLEAEHEEDETKTKAHEEGTVGNKTTAFQPAATMAAKGKVHDRSGQL-VHGGFHFSYDSVRDTVFGLLDEIRATRPGPWRVLVTGHSLGGALATLGAYELAELKLPADPPVVMYTYGAPRVGNKAFAEAFNALVPD--AFRCANDDDIVPRVPRLMGFCHVGTPVLL 582
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|302844632|ref|XP_002953856.1| (hypothetical protein VOLCADRAFT_94625 [Volvox carteri f. nagariensis] >gi|300260964|gb|EFJ45180.1| hypothetical protein VOLCADRAFT_94625, partial [Volvox carteri f. nagariensis]) HSP 1 Score: 76.6406 bits (187), Expect = 1.572e-10 Identity = 68/224 (30.36%), Postives = 93/224 (41.52%), Query Frame = 0
Query: 602 DKRTTYVIFRGTKDPV--DVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPF----IDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDS--VVFVGHSMGGALAQLATVYFCEL-------------------RARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLD 798
+ R V FRGT+ D+ TD+N P ER ++ E LPF I + +Q G VH GF A+DS+++ V LL + GAG D+ V+ GHS+GGALA LA E L TF +P +GN AF D RV N D++PS+ +L+GY H G ++LD
Sbjct: 366 EAREAVVAFRGTEQVKWKDIATDLNLTPCSLNP----------ERLDDNEG------LPFTARIIKAVSGVYQQQVSGRGGGVGVVRFMVHKGFLSAYDSVRRTVFTLLDEITGAGDKGDNWRVLVTGHSLGGALATLAAYELAERRPLPPPRPPITLTPARSVQNITLYTFGAPRVGNKAFAEEFDRLVPD--AWRVTNSNDIIPSVPRLMGYCHVGHAVRLD 571
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|1004137654|gb|KXZ45677.1| (hypothetical protein GPECTOR_52g74 [Gonium pectorale]) HSP 1 Score: 75.485 bits (184), Expect = 2.400e-10 Identity = 64/208 (30.77%), Postives = 89/208 (42.79%), Query Frame = 0
Query: 602 DKRTTYVIFRGTKDPV--DVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATD--SVVFVGHSMGGALAQLATVYFCELRA--------RLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKL 797
+ R + FRGT+ D+ TD+N A P E + + + F I + Q QLM VH GF A+DS+K+ V LL G+G V+ GHS+GGALA LA E R L T+ +P +GN AF D RV N D++PS+ +L+GY H G ++L
Sbjct: 321 EAREAVIAFRGTEQVKWKDIATDLNLTPASLNP-------------ERLDDNAGLPFTARIFKAVSGANQNQLM-----------VHKGFLDAYDSVKRAVFTLLDAVTGSGERGGPWRVLVTGHSLGGALATLAAYELAERRCPARTVQQISLYTYGAPRVGNKAFAEAFDRVVPDT--WRVTNANDIIPSVPRLMGYCHVGHAVRL 502
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|1004137651|gb|KXZ45674.1| (hypothetical protein GPECTOR_52g71 [Gonium pectorale]) HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-9 Identity = 43/123 (34.96%), Postives = 59/123 (47.97%), Query Frame = 0
Query: 685 VHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLATVYFCELR------ARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSK 801
VHGGF ++DS++ V LL + V GHS+GGALA LA E R + T+ +P +GN AF + R ND DVVP + +L+G+ H G P+ L K
Sbjct: 493 VHGGFHFSYDSVRDTVFGLLDEMRATRPGPWRVYVTGHSLGGALATLAAYELAERRLPADPPVVMYTYGAPRVGNKAFAEAFNALVP--DAFRCTNDKDVVPRVPRLMGFCHVGTPVLLAEGK 613
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|301119715|ref|XP_002907585.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262106097|gb|EEY64149.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 70.4774 bits (171), Expect = 1.130e-8 Identity = 50/125 (40.00%), Postives = 67/125 (53.60%), Query Frame = 0
Query: 684 KVHGGFKLAFDSIK---QRVTELLLDEDGAGSATDSVVFVGHSMGGALAQLA----TVYFCELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVG-YRHAGVPIKLDVS 800
+VH GF LA++SI+ + VT L+LDE+ SV GHSMGGALA +A V F ++ + F P +GN +F + D C RV D D+VP + G Y+H G I LDVS
Sbjct: 753 RVHRGFWLAYESIQDELKEVTRLILDENPG----ISVYITGHSMGGALAVIAAYDLAVNF-SIKVNMYNFGGPRVGNPSFRQHYDSCVPT--SYRVVMDGDIVPGWPRFWGLYQHVGTEISLDVS 870
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|1004137652|gb|KXZ45675.1| (hypothetical protein GPECTOR_52g72 [Gonium pectorale]) HSP 1 Score: 70.0922 bits (170), Expect = 1.328e-8 Identity = 42/128 (32.81%), Postives = 62/128 (48.44%), Query Frame = 0
Query: 675 GTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGSATDSVVFV-GHSMGGALAQLATVYFCE----LRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKL 797
G + VH GF+LA DS+ +L GAG A + V+V GHS+GGALA L + + + ++ P +GN AF + R N+ D VP + +L+GY H G P++L
Sbjct: 551 GVTSGNRKMNVHKGFRLAHDSVWDNTLAVLKTVTGAGPAANWHVYVTGHSLGGALATLGAYKLAKSGVVKKVSMYSYGQPRVGNKAFADEFNALIS--NAWRFANENDAVPRVPRLMGYCHVGKPVQL 676
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|926764384|ref|XP_013891244.1| (Lipase [Monoraphidium neglectum] >gi|761956943|gb|KIY92224.1| Lipase [Monoraphidium neglectum]) HSP 1 Score: 63.1586 bits (152), Expect = 2.336e-8 Identity = 41/118 (34.75%), Postives = 58/118 (49.15%), Query Frame = 0
Query: 685 VHGGFKLAFDSIKQRVTELL--LDEDGAGSATDSVVFVGHSMGGALAQLATVYFC---------ELRARLVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHA 791
VH GF A+DS+K +V L+ + E S V GHS+GGA+A L L + TF +P +GN AF ++ D R+ N D+VPS+ +L+GY HA
Sbjct: 2 VHSGFLNAYDSVKVKVFTLVDQITESATPSKPWRVRITGHSLGGAIATLCAYDLSARPPKTGAGSLEVSMYTFGAPRVGNKAFAKVFDERLHNRA-WRITNASDIVPSVPRLMGYSHA 118
BLAST of EWM27980.1 vs. NCBI_GenBank
Match: gi|303282807|ref|XP_003060695.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226458166|gb|EEH55464.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 69.3218 bits (168), Expect = 2.399e-8 Identity = 80/293 (27.30%), Postives = 119/293 (40.61%), Query Frame = 0
Query: 585 VHHVVSDKACAVVVVVPDKRTTYVI-FRGT--KDPVDVLTDINFLSAPFTPLGWEEEGAGGEREEEEERGSAVGFLPFIDPNNAAQEQLQLMAGTDDATGTLKVHGGFKLAFDSIKQRVTELLLDEDGAGS-----------ATDSVVFVGHSMGGALAQLATVYFCE-LRAR-------LVTFASPAIGNAAFCRLLDCCGQPYGGLRVWNDFDVVPSIAQLVGYRHAGVPIKLDVSKSAKELFEEENV----NSLRGLIDFLAPHVMFQLGSVCFVFPVIGWDLQSGGTAL 851
V + +D AV V K T V+ FRGT + DVLTD N + F P +GG+ + EE P VHGGF A+DS++ RV + D A S A V GHS+GGALA L + E + AR + + SP +GN AF + + +RV N D+VP++ L+GYRH +++ + + + L +V ++ G D + +L V V+G D +S A+
Sbjct: 369 VENARTDTQAAVWRNVSSKSKTVVVSFRGTEMRSAKDVLTDANLTPSSFNPERLTGGESGGDIDAEE---------PM-------------------------VHGGFLAAYDSVRARVFAAVDDVMRARSPDYDDDDDDDDAAWHVFVTGHSLGGALATLFSYELAESVNARRRRCTTTMYNYGSPRVGNRAFVKRFNALVPD--SIRVINGSDLVPTLPALLGYRHVDHGVRIP-ANAGEALVGAGDVRASSSAENGTTDVAVGAKIVELAEAMGVRNVLGVDEESASDAV 624 The following BLAST results are available for this feature:
BLAST of EWM27980.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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