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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100008g62.7891.mrna |
| Orig protein id | gnl|cribi|Naga_100008g62.7891 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:972676..973977 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2691 ID=rna2691|Name=rna2691|organism=Nannochloropsis gaditana|type=mRNA|length=3711bp
AACATCCGCACGACCAAAAATGCTAGTAATTCACCGCAATCCTCATTTAT
AAGTTATAACCATACCAACAGTTGACGAACACATCTGCATGGAAGCTGAG
TGGTGCTAAGGGCTCGGGTGTTCATTGTTAATTCCTTCACAAGAAACCCC
TAGGGCTTGGTTATTAGGCGCGTTATGACGATCATTCCCACCCTCATATT
GCTGGTGCTGCTGGCTAATGAAGGTGCATCAGTGCGTCGTCTTGACAGCA
CATTTAGCGAAAGGGACGCGCGAAGGTCGTTGGAGGCAGAAAGGCTTGAG
GCAGAGGGCTTCCGGCGCCTGAAAGAGCGGGGATTAGCAGCTGATGCGAC
CTCACCAGACGAACACTTGGTAAAACAATTACCAGGCCTTGCGGACGATG
CATTTCCTACAAGGCAATGGGCTGGCTTACTGACCGTGGACGAAGCCATC
GAAGGGAAATACTTCTACTGGTTTGTGGAGGCGGCTTCGGACGCGGCGAA
CAAGCCCCTGTTAATATGGCTGAACGGCGGGCCGGGGTGTTCGAGTATGG
ACGGCTTCTTCCTCGAGCATGGGCCCTTTAAAGTCCTCGACGATATGAGC
CTGAGCGTGCATCCGTACAGCTGGCATCATGTGGCCAACGTCGTGTACGT
AGATCAGCCTGTGGGCACGGGCTTTTCTTTCACAGGCCGGCGGCAGTATT
GCGATGAAGACGACTGCATCAACAAGCACATGTACTCCTTCCTTCAGGCA
TTCGCCAAGCTGCATAAGGACTTGGTCCTTCCCACCGGGACGGAGATCAA
GACCAAGCCTATCTTCTTCTCTGGAGAGTCCCAAGCGGGCCATTACATTC
CGAGCATGGTCGATTACATCATGCAGCAGAACCCGAAGGCAGCTTCACCG
GAGGTAGTTCTGGACGTGCAAGGCATGGCCATCGGCAACGGGTGGTTCGA
TCCCCCTAATCAGTACGACGTGAGCGATTACGCGCACGGCGCGGGTTTGA
TCTCGGAAGGACAATACCACACACTCCAAAAGAAGCGGCAAGAGTGCAAC
AGCTTGTTGGCTCAGGGCAAATACTACACCCCCATCTGCTTCGCACTTTT
GGATCTGGTTGTGGGTTCCACAGGCACGGACCAGACAGGTTTTGTTAGCT
TCTACGATTACCGGAAGTACGACCACCCCGGCGACCGCGTCTTTCCGCCC
GGGCACCGCACGGCCGAGCAGTACATGAACCTCCCGCAAGTCAAGGAGGC
TCTGCATGCGGGGGAATCCCCATTGCGTTTCCAGGAATGCACGGACCCAC
CCTACGATGCCTTGAAGCACCAGGACGGCCTGGGCGTGACCGAGCAGGTG
GGCCGCATCTTGGAAGGGGGCGTTCGCGCTCTATTTTTCAACGGAGCTTT
CGACGTCATTTGTAACCACATGGGAAACGAAGCAGCCCTGCAGGCATTAA
AGTGGTCGGGCCAGGATGCTTTCCACGAGGCACGACGAGCCGTTTGGATT
CCCGAGGGGGGAGGGGCGGCGGGAGAGGGGAAGCCGGGAGGGTTTGCCAA
GAGCAGCGGGGCGCTGACGTACCTAGTGGTCGCAGGCGCCGGGCACATGG
TTCCCTTGGATGTTCCCGTGGCTGCCTTGGACATGATGACGCGGTTTGTG
AACCTGAAAAGCTTCGATGACAAATTGCAAGGGATTGAGATGACTGTCGT
TCCTGAAGACACCGTCGCCGCCTCATCCGCAACTGCTCTCAACGGAGCGG
GGGAAACTCCCACTGCTCCCCAAACACCCACACTCAGGAAAGTGACGGCG
TCTGAGACGGAGAGCGGTGTCGTTGCCTTCGACGTGGAAGGGGTGGACGG
CCAGGAGCAGGCCGTTCAGTCGGAGGAGCTCTGGTACACCGTCCTGGTCA
ATCCGGGCGGCTCAATTCTAGTCCCCCGCCAGTCAGACGCCGGCGAAGAG
GACGCAGACGTCGCGCAGCCTGGCCCCCTGCTACTGACCGATTTGAAGGA
GGGGGTGGATTATACGTTTCAGGTCCTGGCCAACAATGTCGTGGGCGCAA
GCAAACCTTCGGAGCCCGCGAGGCTGGTCTTGGGATGCGGGGGGCCCTCA
GGGGCCGGCGGTCCGAACGTGACCACCTGTGAGCACGGGTTGTGCGGCCT
GGATGCCGTTATGGATGAAAAACGCTGCTTTTGCTACGCAGGTTGGGGGG
GCTCTGGATGTCAGGTCGCCGGCCCGGTGGTTTCGGACTCCACCGCGGCA
AAAGGAGGGAACAAAAAACAGGATTCTGGCGCGAAGGAAGGGGTTGGGAA
TGGACGTGTGACCTTCGTTGTGGATCAGTCGTGCACAGATGCCCAAGTAT
CAGAAGAATGTGCCTTGCGCTTCACGGTCCCGCTCCACTTGAACGCCCAT
GCATCCTCAGAGGACAAGGAAGGGGGAGGTAAAAGCAGTGAATGGAGCGT
GTTGGACGGACCGGAGGAGACGAACGCCTTTGAAGGCATGTTGCGTCGTG
ATTTGGCGCAAATTTTGGATGTTCGCAAGGAGCAAGTCGAGCTCCGGGCC
TTGCAACCCCTGAAGGCGACGGCTCACCAGTTGCCCGGTGCGTCGGGAGG
GTCTCGGCTTTTGGAGGACACCGCCACCGCCACGCCTCCGGCAGAGACCC
CGTCTGAAGAGAAGGGCGGCCCCACGCCGGGCGTGGAGGGCCCGATGGCC
TTGACGTTCGACGTCCTGCACCCCCTCGACCCGTCCGGGACCGTCAAGCG
CTTCACGTCGGTATGGGCCATGCCGCAGGGTCCTCTGAGCTTCGGCCTCG
TCACTTCCAATTTTGATGTCAACCGAAACGCGGAGGTCCTGCTCTTGGCT
CAAGGTACGCCTTTGCCCGGGTTGCTGGACAGCAGTAGCAGTCCGGACGT
GATACTTGAGAAAAAAACGAAGCGCACGGCCACCCTGAGTTTTGCCGTCA
TCCTCTTCCTCGGTGCTGTCGTCTTAATGATTGTACGGTACTCCCGGCGG
AAACTAGGGTTTGGTCCCGGTGGGACAGGAAGTGGCGCACAGCAAAGGAG
AAGGCAGGAGATGCAAGGGGGCGGAGGCAGGCGGAGGATGGACTCCCCCG
AGGACCAGGACCTAGACCACGACATTGTTTTGGACGGGAGTGGCGACGAC
GGGACTGTAGTGGAGATCATGGAGATGCGAATGCCGACGGGCTCCCAGGG
CTCGAGGGGGGGCTCGGGTTTGGGGGGCAGTGGCAGCATTTTGAGTCGAA
TCGTGCCCGACAAGGACGGCGCGGACGAGCGGCTTGTGTAACTCGCCTGG
GGGGACTCCGGAGAAAGGCACGATCACTGCGAGATTGGACTTGTTAGGCT
GTATGAGTAGGATGGGGCTGAGTAGGAAGAGTCTCGCTTCTCGCGGCGTA
AAAGTAAGACTGTATTGTATTCACTGCTCACGGTGTAAGAAACTGCTGGA
TATTCAGTGGGCGTCTATCAGTTAAAATGGCGTAGGGGAATAGAGTAACT
CATGTAGTCGAGAATTGCTTCCAGGCCTGATGTAAAATTGTGCCTTTACT
GCCATGCAAGCCGCGAGAACCCGAAGAAGGGTTGCGGATCAACACATTTA
TTTGACTTGGCCTCAGAACCTTGTGTCTGCTCCCACATTCACCAGTACAC
TTTGACAAGCGATGCGCGCATTCCCACTTTATAGAATGAGAAGCAGCACG
AGTGAGCACTC back to topprotein sequence of rna2691 >rna2691-protein ID=rna2691-protein|Name=rna2691|organism=Nannochloropsis gaditana|type=polypeptide|length=229bp
MLSTRDSIISTGRLLPALSSPRRIHRDTLVKSSSLQHEMETSSPPRLHSA
ACLIQTIYRGHRTRRRIWQDPLASYISLSAHIERECGFWTSSSMSPPPDH
IVSQFRARTVRRAFKSSTSCSKTSTATQEHTKSQEGSENCPSDSRTLLGS
NAASTATPMPPLPCLPPVPSVAAHRSRAAILVELRWVNSSLRQRVLFLRA
QRKLQSLGHHEDDTGRAIHREYLAPAAAN back to topmRNA from alignment at CM002459.1:972676..973977- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2691 ID=rna2691|Name=rna2691|organism=Nannochloropsis gaditana|type=mRNA|length=1302bp|location=Sequence derived from alignment at CM002459.1:972676..973977- (Nannochloropsis gaditana)
CGCTCGGGCTCCACTGCTTGAACGTGGTCACTCAACCTGCAAAAATAACC
TTTGGAATGCTTTCCACACGGGATTCGATAATCTCCACAGGGCGTTTGCT
CCCGGCCTTGTCTTCCCCTCGTCGCATTCACCGGGACACATTGGTCAAGT
CTTCTTCCTTACAACACGAAATGGAGACATCTTCACCGCCCCGTCTCCAT
TCTGCGGCGTGCCTTATTCAAACCATATATCGGGGACATCGCACACGAAG
ACGGATTTGGCAGGATCCTCTCGCGTCCTACATATCTCTTTCAGCACATA
TCGAAAGGGAGTGTGGCTTTTGGACTTCTTCATCGATGTCTCCTCCTCCT
GACCACATCGTAAGCCAATTCCGGGCACGTACCGTGAGGCGCGCCTTCAA
GAGCTCAACATCATGCTCCAAAACCTCGACAGCCACCCAGGAACACACGA
AGTCCCAGGAAGGCTCGGAAAATTGTCCGTCAGATTCCCGTACGTTGCTT
GGAAGCAATGCTGCTTCCACTGCGACTCCGATGCCTCCACTGCCCTGCTT
GCCTCCTGTCCCGTCCGTTGCGGCCCATCGCAGTCGTGCAGCCATCCTGG
TGGAGCTACGATGGGTGAACAGTAGTCTGCGACAACGTGTGCTGGTACGG
AGTCGTTGAGGAATGGCGAGGAAGTTGAAAGTGCAGTATGACTGGTCTTT
TGTATCGTGTTTTTGGCTCATATTGGAATTTACCGTAAACATACAGTTTC
TTCGAGCGCAGAGGAAATTACAATCGTTGGGACATCATGAGGATGATACA
GGACGAGCGATTCACAGGGAGTACTTAGCCCCTGCGGCAGCAAACTAATT
GTCAGGGGGAAGTGAGCAAAAACTGACGGTGGGAGTAGCGCATGACAAGC
ACGAGGCGCTGGCCGACAAATTTTGAGAGAGCATGGGGGGACATTCTGTG
GGGGAAAAGTAACGTGTAGATACTGTCCGGAGAAGAGTGCTCACTCGTGC
TGCTTCTCATTCTATAAAGTGGGAATGCGCGCATCGCTTGTCAAAGTGTA
CTGGTGAATGTGGGAGCAGACACAAGGTTCTGAGGCCAAGTCAAATAAAT
GTGTTGATCCGCAACCCTTCTTCGGGTTCTCGCGGCTTGCATGGCAGTAA
AGGCACAATTTTACATCAGGCCTGGAAGCAATTCTCGACTACATGAGTTA
CTCTATTCCCCTACGCCATTTTAACTGATAGACGCCCACTGAATATCCAG
CAGTTTCTTACACCGTGAGCAGTGAATACAATACAGTCTTACTTTTACGC
CG back to topCoding sequence (CDS) from alignment at CM002459.1:972676..973977- >rna2691 ID=rna2691|Name=rna2691|organism=Nannochloropsis gaditana|type=CDS|length=1380bp|location=Sequence derived from alignment at CM002459.1:972676..973977- (Nannochloropsis gaditana)
TTTCTTCGAGCGCAGAGGAAATTACAATCGTTGGGACATCATGAGGATGA
TACAGGACGAGCGATTCACAGGGAGTACTTAGCCCCTGCGGCAGCAAACT
AAATGCTTTCCACACGGGATTCGATAATCTCCACAGGGCGTTTGCTCCCG
GCCTTGTCTTCCCCTCGTCGCATTCACCGGGACACATTGGTCAAGTCTTC
TTCCTTACAACACGAAATGGAGACATCTTCACCGCCCCGTCTCCATTCTG
CGGCGTGCCTTATTCAAACCATATATCGGGGACATCGCACACGAAGACGG
ATTTGGCAGGATCCTCTCGCGTCCTACATATCTCTTTCAGCACATATCGA
AAGGGAGTGTGGCTTTTGGACTTCTTCATCGATGTCTCCTCCTCCTGACC
ACATCGTAAGCCAATTCCGGGCACGTACCGTGAGGCGCGCCTTCAAGAGC
TCAACATCATGCTCCAAAACCTCGACAGCCACCCAGGAACACACGAAGTC
CCAGGAAGGCTCGGAAAATTGTCCGTCAGATTCCCGTACGTTGCTTGGAA
GCAATGCTGCTTCCACTGCGACTCCGATGCCTCCACTGCCCTGCTTGCCT
CCTGTCCCGTCCGTTGCGGCCCATCGCAGTCGTGCAGCCATCCTGGTGGA
GCTACGATGGGTGAACAGTAGTCTGCGACAACGTGTGCTGTTTCTTCGAG
CGCAGAGGAAATTACAATCGTTGGGACATCATGAGGATGATACAGGACGA
GCGATTCACAGGGAGTACTTAGCCCCTGCGGCAGCAAACTAAATGCTTTC
CACACGGGATTCGATAATCTCCACAGGGCGTTTGCTCCCGGCCTTGTCTT
CCCCTCGTCGCATTCACCGGGACACATTGGTCAAGTCTTCTTCCTTACAA
CACGAAATGGAGACATCTTCACCGCCCCGTCTCCATTCTGCGGCGTGCCT
TATTCAAACCATATATCGGGGACATCGCACACGAAGACGGATTTGGCAGG
ATCCTCTCGCGTCCTACATATCTCTTTCAGCACATATCGAAAGGGAGTGT
GGCTTTTGGACTTCTTCATCGATGTCTCCTCCTCCTGACCACATCGTAAG
CCAATTCCGGGCACGTACCGTGAGGCGCGCCTTCAAGAGCTCAACATCAT
GCTCCAAAACCTCGACAGCCACCCAGGAACACACGAAGTCCCAGGAAGGC
TCGGAAAATTGTCCGTCAGATTCCCGTACGTTGCTTGGAAGCAATGCTGC
TTCCACTGCGACTCCGATGCCTCCACTGCCCTGCTTGCCTCCTGTCCCGT
CCGTTGCGGCCCATCGCAGTCGTGCAGCCATCCTGGTGGAGCTACGATGG
GTGAACAGTAGTCTGCGACAACGTGTGCTG back to top
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