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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF2930 |
| Orig transcript id | gnl|cribi|Naga_100008g54.7879.mrna |
| Orig protein id | gnl|cribi|Naga_100008g54.7879 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:959872..961282 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2684 ID=rna2684|Name=rna2684|organism=Nannochloropsis gaditana|type=mRNA|length=477bp
ATGGCTCCTTGGGGCAGGCAGAGATCCCTTGGCAAACCTCTTGCATCAGC
GGAAAGTGGATTACTGGGTTCCTCTTGCGTCATCAAGTGGAAGGGGTGGA
GCAGGGGAAGTGCGCTTGGTATTACAGTACAAATTCAATCGTGCCGGCGA
GGTTTTCTCCAGATTCTGGCCCGAGCCTCCGTGCGTGAAGGAGCTGCCTG
CATTTCCCTCCCTCACACATACAAGCACATGACCGATTTGGTGGAGGATA
GCAAACCGCTCACGGAACTCCTGCACTGGGCCAGAAGGGTCCTGGATTGG
GGACACCCGGCAGAAACCCTGTTCGTGTACGGCGTGGTGGTGGCTTTGAC
GCTTTCCCTCGGTACGTATTCTCCTTCCTACACCTTGTCCTCCCTCGTTA
CGTGCTCCTCGCCTGGGTGGCTCGGCAGGGTGGGCAGCACGAGCGAGACG
TGGCGGAGACGGCGGAGAAATGCATGA back to topprotein sequence of rna2684 >rna2684-protein ID=rna2684-protein|Name=rna2684|organism=Nannochloropsis gaditana|type=polypeptide|length=330bp
MCQSRPPLALYGTELRENNLSSTGSNRVQVFSFSGALRQMRIPPLIAVIV
LGKLGLNAAFVPSACSNIHKASISSHMTQQLTYRSIAFETILMAEGNSQV
GSMESVFKFIRSDALSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVF
SAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALTPRQVTILRWA
AQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALS
SNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLII
LGGNKRRDLTPKDLARARVIAQKVQTCLAE back to topmRNA from alignment at CM002459.1:959872..961282- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2684 ID=rna2684|Name=rna2684|organism=Nannochloropsis gaditana|type=mRNA|length=1411bp|location=Sequence derived from alignment at CM002459.1:959872..961282- (Nannochloropsis gaditana)
CGTCTTCCTTTTTGGCGTGGTTTTCGGGGAATTGATGTGTCAATCACGTC
CACCTCTAGCTTTATATGGTACTGAATTAAGGGAAAATAATCTTTCATCT
ACAGGCAGCAATAGAGTGCAGGTATTCAGTTTTTCCGGAGCATTGAGACA
GATGAGGATACCTCCGCTAATAGCTGTCATCGTGTTGGGCAAGTTGGGTT
TGAATGCTGCATTCGTTCCTTCTGCATGCTCGAACATCCACAAAGCTTCA
ATTAGTTCTCACATGACCCAGCAATTGACTTACCGCTCTATTGCATTTGA
AACGATATTGATGGCTGAGGGTAACAGCCAAGTGGGTTCCATGGAGAGCG
TCTTCAAATTCATTCGAAGCGATGCGCTCTCTCTGACTGTTGGCTCCCTT
TGTCTCCTCGCTCTTGTCACAAATCGCTTGTACACTGATCCTTTATTTGA
TTCGCAAAGCCGTACCGACATTTTGGGCGTCTTCTCGGCCGGTGGCCTCC
TCCTAAATGGCTTGACATTACAGGTAAGATGAAGGAAAAAATCACCTGTT
CTTTCTCCTTCAAGATCAACTGCCTCCTGTACTCATAAGAAAAATTCTGA
TTTGAGAAAATTTATTTCACACGTAGGATATCACAGTACGCGAGGCTGAT
GTTGTGCAGTTACAAGGACCGGCGGTGGACGATGTGAAGGGTTTCGATGC
TCTCACCCCTCGTCAGGTCACAATCCTCCGCTGGGCAGCCCAAACTTATC
TGAAGGCCTTTCCCACGTTGCCATCTGTTCTCATCTGGCATAAAGGCCAA
ACTTTGCTTCGAAATGGCATCATGGCAGATCCTGCGAGAGGGACGGGTGA
CGTGAGGGTGCTTGCCATAGTACAGCAAGCTTTGAGCTCCAATCCCGAGG
CGGACGGCTTGTGTCAGCCGACGTACATTCCCGATTTACAGGTCTTGCCC
GGTAAAATTGAATTCATGAACTACCTACCATCCATGTGCCAGGCTGTGGT
TTTACAGCCATTTGATAGCAATCAAGGGCTAATTATTTTGGGGGGCAACA
AACGACGAGACCTTACCCCCAAGGACTTGGCCAGAGCACGGGTCATCGCG
CAAAAGGTGCAGACTTGTTTAGCGGAGTAAAAAAATCCAGATCAGCGTAT
ACTAGTGCATTCAGGGTTGTCACATGGCAGTTTGCGGGGCAGCACATAGT
ATATACTATTGGCAACCTCACAAAACACCGCTGACAATGATTTGCGTCCA
CCACCGTACTCTTTTACTGTCACTCTTCACGCAGTGTACAAACCGCGTTG
GACAATGGAAACACCCGCTTAAACAGCGTTGGACAATGGAAACACCCGCT
TTCTATACAAAAAAGTGAAGGGTGAACTCTGTGAAAGTAAACAAGTAAAC
ATGAAAGCAGC back to topCoding sequence (CDS) from alignment at CM002459.1:959872..961282- >rna2684 ID=rna2684|Name=rna2684|organism=Nannochloropsis gaditana|type=CDS|length=1986bp|location=Sequence derived from alignment at CM002459.1:959872..961282- (Nannochloropsis gaditana)
GATATCACAGTACGCGAGGCTGATGTTGTGCAGTTACAAGGACCGGCGGT
GGACGATGTGAAGGGTTTCGATGCTCTCACCCCTCGTCAGGTCACAATCC
TCCGCTGGGCAGCCCAAACTTATCTGAAGGCCTTTCCCACGTTGCCATCT
GTTCTCATCTGGCATAAAGGCCAAACTTTGCTTCGAAATGGCATCATGGC
AGATCCTGCGAGAGGGACGGGTGACGTGAGGGTGCTTGCCATAGTACAGC
AAGCTTTGAGCTCCAATCCCGAGGCGGACGGCTTGTGTCAGCCGACGTAC
ATTCCCGATTTACAGGTCTTGCCCGGTAAAATTGAATTCATGAACTACCT
ACCATCCATGTGCCAGGCTGTGGTTTTACAGCCATTTGATAGCAATCAAG
GGCTAATTATTTTGGGGGGCAACAAACGACGAGACCTTACCCCCAAGGAC
TTGGCCAGAGCACGGGTCATCGCGCAAAAGGTGCAGACTTGTTTAGCGGA
GTAAATGTGTCAATCACGTCCACCTCTAGCTTTATATGGTACTGAATTAA
GGGAAAATAATCTTTCATCTACAGGCAGCAATAGAGTGCAGGTATTCAGT
TTTTCCGGAGCATTGAGACAGATGAGGATACCTCCGCTAATAGCTGTCAT
CGTGTTGGGCAAGTTGGGTTTGAATGCTGCATTCGTTCCTTCTGCATGCT
CGAACATCCACAAAGCTTCAATTAGTTCTCACATGACCCAGCAATTGACT
TACCGCTCTATTGCATTTGAAACGATATTGATGGCTGAGGGTAACAGCCA
AGTGGGTTCCATGGAGAGCGTCTTCAAATTCATTCGAAGCGATGCGCTCT
CTCTGACTGTTGGCTCCCTTTGTCTCCTCGCTCTTGTCACAAATCGCTTG
TACACTGATCCTTTATTTGATTCGCAAAGCCGTACCGACATTTTGGGCGT
CTTCTCGGCCGGTGGCCTCCTCCTAAATGGCTTGACATTACAGGATATCA
CAGTACGCGAGGCTGATGTTGTGCAGTTACAAGGACCGGCGGTGGACGAT
GTGAAGGGTTTCGATGCTCTCACCCCTCGTCAGGTCACAATCCTCCGCTG
GGCAGCCCAAACTTATCTGAAGGCCTTTCCCACGTTGCCATCTGTTCTCA
TCTGGCATAAAGGCCAAACTTTGCTTCGAAATGGCATCATGGCAGATCCT
GCGAGAGGGACGGGTGACGTGAGGGTGCTTGCCATAGTACAGCAAGCTTT
GAGCTCCAATCCCGAGGCGGACGGCTTGTGTCAGCCGACGTACATTCCCG
ATTTACAGGTCTTGCCCGGTAAAATTGAATTCATGAACTACCTACCATCC
ATGTGCCAGGCTGTGGTTTTACAGCCATTTGATAGCAATCAAGGGCTAAT
TATTTTGGGGGGCAACAAACGACGAGACCTTACCCCCAAGGACTTGGCCA
GAGCACGGGTCATCGCGCAAAAGGTGCAGACTTGTTTAGCGGAGTAAATG
TGTCAATCACGTCCACCTCTAGCTTTATATGGTACTGAATTAAGGGAAAA
TAATCTTTCATCTACAGGCAGCAATAGAGTGCAGGTATTCAGTTTTTCCG
GAGCATTGAGACAGATGAGGATACCTCCGCTAATAGCTGTCATCGTGTTG
GGCAAGTTGGGTTTGAATGCTGCATTCGTTCCTTCTGCATGCTCGAACAT
CCACAAAGCTTCAATTAGTTCTCACATGACCCAGCAATTGACTTACCGCT
CTATTGCATTTGAAACGATATTGATGGCTGAGGGTAACAGCCAAGTGGGT
TCCATGGAGAGCGTCTTCAAATTCATTCGAAGCGATGCGCTCTCTCTGAC
TGTTGGCTCCCTTTGTCTCCTCGCTCTTGTCACAAATCGCTTGTACACTG
ATCCTTTATTTGATTCGCAAAGCCGTACCGACATTTTGGGCGTCTTCTCG
GCCGGTGGCCTCCTCCTAAATGGCTTGACATTACAG back to top
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