EWM27987.1, cds2676 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27987.1 vs. NCBI_GenBank
Match: gi|585110328|gb|EWM27987.1| (Protein of unknown function DUF2930 [Nannochloropsis gaditana]) HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0
Query: 1 MCQSRPPLALYGTELRENNLSSTGSNRVQVFSFSGALRQMRIPPLIAVIVLGKLGLNAAFVPSACSNIHKASISSHMTQQLTYRSIAFETILMAEGNSQVGSMESVFKFIRSDALSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALTPRQVTILRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDLARARVIAQKVQTCLAE 330
MCQSRPPLALYGTELRENNLSSTGSNRVQVFSFSGALRQMRIPPLIAVIVLGKLGLNAAFVPSACSNIHKASISSHMTQQLTYRSIAFETILMAEGNSQVGSMESVFKFIRSDALSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALTPRQVTILRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDLARARVIAQKVQTCLAE
Sbjct: 1 MCQSRPPLALYGTELRENNLSSTGSNRVQVFSFSGALRQMRIPPLIAVIVLGKLGLNAAFVPSACSNIHKASISSHMTQQLTYRSIAFETILMAEGNSQVGSMESVFKFIRSDALSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALTPRQVTILRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDLARARVIAQKVQTCLAE 330
BLAST of EWM27987.1 vs. NCBI_GenBank
Match: gi|298707779|emb|CBJ30210.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 138.272 bits (347), Expect = 5.462e-35 Identity = 93/259 (35.91%), Postives = 144/259 (55.60%), Query Frame = 0
Query: 56 LNAAFVPSACSNIHKASISSHMTQQLTYRSIAFETILMAEGNSQVGSMESVFKFIRSDALSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALTPRQVTILRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDL 314
+++A PS+C + A +SH ++ R T+ E + S+ + + +SL VG LLA++ NR+ T L DSQ+RTDILGV ++GGL+ NG+ L D+ V+EA+ V L G V + D L P L+W ++ L P S+L++ G+TL R G+M + A D+R I+++ +S DG Q Y+ LQ LPGK+EF +YLP CQAV++ P ++++G N+ R TPKD+
Sbjct: 28 VSSALRPSSCRAM--ADRTSHNNKRSVSRRPRAVTMASDEVEQRSPVAGSLIRALTGPYVSLGVGVGILLAVLANRIATPELVDSQARTDILGVIASGGLVTNGVYLLDLKVKEAEEVTLVGTFVQEYA--DDLAPGARRDLQWLGESLLLVSPA-TSMLVYQDGKTLARVGVMGESA----DIRDAPILRKCISEG--RDGREQ--YLAALQTLPGKVEF-DYLPENCQAVLMLPVLEGSAVVVVGTNRARAFTPKDI 272
BLAST of EWM27987.1 vs. NCBI_GenBank
Match: gi|752598920|ref|WP_041268307.1| (hypothetical protein [Geitlerinema sp. PCC 7407]) HSP 1 Score: 115.546 bits (288), Expect = 3.618e-27 Identity = 86/219 (39.27%), Postives = 116/219 (52.97%), Query Frame = 0
Query: 115 LSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALT--PRQV-TILRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDLARARVIAQKVQTCLAE 330
L L VG+L + L TNRL T L DSQ+R+D LGV + L+L GL Q + R D V L GP +GFD + P V T L WA+ L T S+++W+ GQ LLR GI+ P G +L VQQ +P Y+ DL+V PG+IEF +YLP Q V+ QP ++G++ILG N R T +D IA K+ L++
Sbjct: 13 LPLVVGALGGVLLFTNRLLTPLLTDSQARSDALGVILSALLILTGLLWQRVQPRSPDAVDLVGP-----EGFDLASDLPEPVKTELAWASHILLTNTVT-KSLVVWYDGQVLLRRGILG-PVAGVKPGPILERVQQK----------QRPVYLVDLKVYPGRIEF-DYLPENTQGVICQPL-GDRGVLILGANAPRSYTQQDENWVEAIAAKLDHTLSQ 212
BLAST of EWM27987.1 vs. NCBI_GenBank
Match: gi|427984716|gb|AFY65860.1| (hypothetical protein GEI7407_1366 [Geitlerinema sp. PCC 7407]) HSP 1 Score: 115.546 bits (288), Expect = 1.069e-26 Identity = 86/219 (39.27%), Postives = 116/219 (52.97%), Query Frame = 0
Query: 115 LSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALT--PRQV-TILRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDLARARVIAQKVQTCLAE 330
L L VG+L + L TNRL T L DSQ+R+D LGV + L+L GL Q + R D V L GP +GFD + P V T L WA+ L T S+++W+ GQ LLR GI+ P G +L VQQ +P Y+ DL+V PG+IEF +YLP Q V+ QP ++G++ILG N R T +D IA K+ L++
Sbjct: 48 LPLVVGALGGVLLFTNRLLTPLLTDSQARSDALGVILSALLILTGLLWQRVQPRSPDAVDLVGP-----EGFDLASDLPEPVKTELAWASHILLTNTVT-KSLVVWYDGQVLLRRGILG-PVAGVKPGPILERVQQK----------QRPVYLVDLKVYPGRIEF-DYLPENTQGVICQPL-GDRGVLILGANAPRSYTQQDENWVEAIAAKLDHTLSQ 247
BLAST of EWM27987.1 vs. NCBI_GenBank
Match: gi|873233034|emb|CEM04109.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 109.768 bits (273), Expect = 1.187e-24 Identity = 72/217 (33.18%), Postives = 116/217 (53.46%), Query Frame = 0
Query: 109 FIRSDALSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALTPRQVTILRWAAQTYLKAFPTLPSVLIW-------HKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPF---DSNQGLIILGGNKRRDLTPKDLA 315
F +S+ +GS CLLA++ NRL + SQ R D+L ++ GL+L G+ L+DIT +EAD V+L + A +Q +LRWA+++ L+ P SV+++ + +LR+G M D+ I++ A SS G+ + DL+ LPG++E + YLPS +VV+QPF D G+++ G N+ R +T + LA
Sbjct: 17 FFVQPKVSIAIGSFCLLAILINRLIDITAYASQGRADLLATLASAGLVLIGVALEDITAKEADRVELDAANLIRQAEATAADEQQEGLLRWASESLLRGTP-YRSVVVFIADDSDLSRASIVLRHGYMGQDLSSV-DLTSSPILRSAFSSAKA--GISDAVCLQDLKFLPGRVE-LTYLPSNVPSVVMQPFTTSDGRPGVVVCGTNRPRSVTARHLA 228
BLAST of EWM27987.1 vs. NCBI_GenBank
Match: gi|499929997|ref|WP_011610731.1| (cofactor assembly of complex C subunit B [Trichodesmium erythraeum] >gi|110165803|gb|ABG50343.1| conserved hypothetical protein [Trichodesmium erythraeum IMS101]) HSP 1 Score: 108.227 bits (269), Expect = 2.045e-24 Identity = 77/216 (35.65%), Postives = 114/216 (52.78%), Query Frame = 0
Query: 115 LSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALTPRQVTILRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDLARARVIAQKVQTCLAE 330
L + G L L+TNR +T L SQ+R+D++GV + L+L GL Q I R D V+L G + + + L+ T L WA+ L T +V+IWH+ + LLR GI+ + ++ I++Q L G +P Y+ DL+V PG+IEF NYLP Q V+ QP +N G++ILG N R T +D IA K+ L++
Sbjct: 13 LPIIAGGLGATLLMTNRFFTPNLLASQTRSDVVGVILSAFLILTGLLWQQIQPRSPDTVKLIGKS--EFELLPELSEIVKTELAWASSLLLTNTVT-KTVIIWHQEKVLLRRGILPSESY----IKPGTILKQVL-------GKQKPIYLVDLKVYPGRIEF-NYLPENTQGVICQPLGNN-GVMILGANAPRSYTKQDENWISGIADKLTDTLSK 212
BLAST of EWM27987.1 vs. NCBI_GenBank
Match: gi|504977206|ref|WP_015164308.1| (cofactor assembly of complex C subunit B [Pseudanabaena sp. PCC 7367] >gi|427989080|gb|AFY69335.1| hypothetical protein Pse7367_1037 [Pseudanabaena sp. PCC 7367]) HSP 1 Score: 107.842 bits (268), Expect = 4.704e-24 Identity = 78/220 (35.45%), Postives = 118/220 (53.64%), Query Frame = 0
Query: 115 LSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALTPRQVTILRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMA--DPARGTGDVRVL--AIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDLARARVIAQKVQTCLAE 330
L L VG + AL NRL T L +SQSR+D +G+ + L+L L Q + + + VQL G V ++ +LTP Q L WA+ T L T S++IW+ + LLR GIM D ++ + ++ AI+ ++L + +PTY+ L + PG++EF +YLP Q V++QP D +G IILG N R T +D IA K+ L++
Sbjct: 5 LPLIVGIIGGTALFINRLLTPMLTESQSRSDAMGILESAILILIALLWQQVQPKPPESVQLVGAEVFEIDP--SLTPNQQAELAWASHTLLTNTIT-KSIVIWYDDRILLRRGIMPKQDQSKSKNESKIEPGAILARSLKTQ-------KPTYLVKLALYPGRLEF-DYLPENTQGVIVQPID-ERGAIILGANAPRSYTKQDENWIAAIAAKLAYSLSD 212
BLAST of EWM27987.1 vs. NCBI_GenBank
Match: gi|1057518378|ref|WP_068815809.1| (cofactor assembly of complex C subunit B [Phormidesmis priestleyi]) HSP 1 Score: 106.686 bits (265), Expect = 7.382e-24 Identity = 77/219 (35.16%), Postives = 115/219 (52.51%), Query Frame = 0
Query: 115 LSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALT--PRQV-TILRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDLARARVIAQKVQTCLAE 330
L + VGS+ + L TNR T L DSQ+R+D LGV + L+L GL Q + R + V+L G +GF+ P V T L W + L T S+++WH+G+ LLR GI++ +V+ AI+Q+ L + QP Y+ L + PG+ EF +YLP Q V+ QP + +G +ILG N R T +D IA+K+ L++
Sbjct: 13 LPIVVGSIAGILLFTNRFLTSSLTDSQARSDALGVILSALLILTGLLWQRVQSRTPESVELVGE-----QGFELAPDLPDAVKTELAWMSHLLLTNTVT-KSIVVWHRGKVLLRRGILSP----NTEVKPGAILQRVLDKH-------QPIYLVALAIYPGRFEF-DYLPENTQGVICQPIGA-EGALILGANAPRSYTKQDENWVAAIAEKLDNTLSQ 212
BLAST of EWM27987.1 vs. NCBI_GenBank
Match: gi|1130430777|ref|WP_075599524.1| (cofactor assembly of complex C subunit B [Oscillatoriales cyanobacterium 'hensonii'] >gi|1129071292|gb|OLP17321.1| hypothetical protein BST81_16070 [Oscillatoriales cyanobacterium 'hensonii']) HSP 1 Score: 106.301 bits (264), Expect = 1.077e-23 Identity = 76/204 (37.25%), Postives = 110/204 (53.92%), Query Frame = 0
Query: 130 NRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALT--PRQVTI-LRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDLARARVIAQKVQTCLAE 330
NRL+T L DSQ+R+D LGV + L+L GL + + R DVV L G +GF+ + P V I L WA++ L T S+++W+ GQ LLR GI+ +V+ I+Q+ L+ +P Y+ DL+V PG+IEF NYLP Q V+ QP +G++ILG N R T +D IA+K+ L +
Sbjct: 28 NRLWTAELTDSQARSDALGVILSALLILTGLLWERVQPRSPDVVLLTGE-----EGFELASDLPEVVKIELAWASRILLTNTATR-SLVVWYGGQVLLRRGILGP----VPEVQPGPILQRVLTQQ-------KPVYLVDLKVYPGRIEF-NYLPENTQGVICQPI-GGEGVLILGANAPRSYTQQDENWVEAIAEKLANSLGQ 212
BLAST of EWM27987.1 vs. NCBI_GenBank
Match: gi|515373154|ref|WP_016872552.1| (hypothetical protein [Chlorogloeopsis fritschii]) HSP 1 Score: 105.531 bits (262), Expect = 2.209e-23 Identity = 81/220 (36.82%), Postives = 116/220 (52.73%), Query Frame = 0
Query: 115 LSLTVGSLCLLALVTNRLYTDPLFDSQSRTDILGVFSAGGLLLNGLTLQDITVREADVVQLQGPAVDDVKGFDALTP----RQVTILRWAAQTYLKAFPTLPSVLIWHKGQTLLRNGIMADPARGTGDVRVLAIVQQALSSNPEADGLCQPTYIPDLQVLPGKIEFMNYLPSMCQAVVLQPFDSNQGLIILGGNKRRDLTPKDLARARVIAQKVQTCLAE 330
L + VG L + L+ NRL T + DSQ+R D+LGV + L+L GL Q + R D V+L G +GF L P R T L WA+ L T S++++++G+ LLR GI++ + +V+ I+++ L QP Y+ DL+V PG+IEF +YLP Q V+ QP NQG +ILG N R T +D IA K+ L E
Sbjct: 13 LPIFVGGLGAVLLLVNRLLTPQITDSQARADVLGVILSAVLILIGLIWQQVQPRSPDAVELVGE-----EGF-VLAPDLPDRVKTELAWASHLLLTNTVTR-SLVVFYQGKVLLRRGILSTKS----EVKPGVILKRVLEKQ-------QPVYLVDLKVYPGRIEF-DYLPENTQGVICQPI-GNQGALILGANAPRSYTKQDENWIAGIADKLAVTLNE 212 The following BLAST results are available for this feature:
BLAST of EWM27987.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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