rna268, rna268 (mRNA) Nannochloropsis gaditana

Overview
Namerna268
Unique Namerna268
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2018
Alignment locationCM002455.1:686190..687349 -

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Properties
Property NameValue
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100026g48.10647.mrna
Orig protein idgnl|cribi|Naga_100026g48.10647
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:686190..687349 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100026g48gene257Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna268rna268-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30393.1cds268Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna268 ID=rna268|Name=rna268|organism=Nannochloropsis gaditana|type=mRNA|length=2018bp
CCTTACTGCCTCTTACATCCCCAAACGCACAGATTGAACAGTTCTCAAAG
GTCGTCCTCCTTTATTAAGGAAGCTCAAATTTGTGCTACTTACCAAGTGC
CACTGGGCTGGTAAATCACACTGGGAATTCGATAATTTAGCTCCCGTCGC
TCCTTGGTAGAAGTAGCACCTGTGCAGACGAGCCTCTTGGAAATGGTTTT
GGGGACTCGCAAAGGCACCTCGTCTTGCTTTTGCCTGTCCTTGACAAACT
TGATAACAGTAACTATGTTTTCTTGCGCTGCGATAGCCAATTCTCGACAC
CAGGCACAGACGGCCGCTTTCGGCTCGCTTTTGGCCAAGGTGCCGACCAA
ATCCTCGCGGACATCTCCTCGTCGTCTGCTCGCTCCCTGCGCGTTCACGC
AGGCCCCCTCGTGCCGCCCACCACGGTTATTGGTGTCGCCTGTCTCAACC
TCTACGACCCTCTACGTCTCAAGTAGCACTGCTGCACCCAGTACTTCCAC
CGCAACCACCGTGCCAGCCCGTTTGAAAGTCCGGGACATATTGATCAACG
GCGACGACAGTTTGATCGGGCAACGCGTCACGGTCAAGGGATGGACCCGC
ACAATTCGCTCGCAAAAAACCTTCAGTTTCATCGAAATAAATGACGGCTC
CTCCTTGGGGGGGTTGCAAGTGGTGGCGGACGCGGAGAAGGTCTGCGACT
ACGAGGCCGTCCTCTCCAAGATACACACAGGGGCTGCCCTGGGTGTCGTG
GGCGTGATCAAGGCGAGCCCAGGAAAGGGCCAAAAGTATGAAGTCGCAGC
GGAGAGCGTGGAGGTGGTCGGGGGCTGCGATCCGGAGGCCTACCCTCTCC
AGAAGAAGCGCCACACGCTCGAGTTCCTCAGGGGGATCGCCCACCTGCGA
CCACGCACCAACACCCTGGCCGCCGTGGCCCGCGTCCGGTCCGCCCTGGC
TTTTGCCACGCACAATTTTTTCCAGGAGCAGGGATTCTACTACCTGCAGA
GCCCTATCATCACGGCCTCTGACTGCGAGGGCGCCGGCGAGATGTTCCGA
GTCACCACCTTGCCGGACAAGGTTTCGGAGTTGCCGCGGGTGGAAGGGGA
GGAGGATCGCATCGACTACTCCCACGATTTCTTTGGTGCCCCCGCCTACC
TGACCGTGTCGGGGCAGCTCTCGGGGGAGGCCTACGCGTGCGCCATGGGG
GATGTGTACACGTTCGGACCCACCTTCCGGGCCGAGAACAGCCAGACCAC
GCGGCACTTGGCCGAGTTCAACATGATCGAGCCCGAGATGGCGTTCGCAG
ACTTGCAAGACAACATGCGCAACGCCGAAGCCTATGTGAAGGCCATCGTC
AGGCATGTGCTCAAGGAATGCGAGGAGGATCTCGCCTTCTTCGAGAAATT
TTACGACAAGACCCTCATGGCGCGGCTGAACACGCTCGTCTCCGAGTCCT
TCGCGCGCGTCGAATACACGGAAGCCGTACGTCTCCTCCAGGAAGAGATC
GCGAAGGACAGAGGCGCTTGGCAGTTCCCAGACGTCGACTTCGGGACGGA
CCTGCAGACGGAGCACGAGCGTTGGCTGTGTGAGAAAAAATTCCAACGAG
CCACCTTTGTGTATAACTACCCGCGCGAGATAAAGGCTTTCTACATGCGC
GACAACGAGGACGGGAAAACGGTGGCGGCGATGGATCTGCTCGTCCCTGG
CGTCGGAGAGTTGATCGGAGGTTCGCAGAGGGAGGAGAGGCTGGGGAGGC
TGGAGGCGAAGCTAGAAGAGTTTGGACTAGACAAGGAGGACTACTGGTGG
TATTTAGATCTCAGGCGCTTCGGGAGTGTGCCACACTCCGGCTACGGACT
GGGCTTCGAGAGGCTCGTGTGCTACGTCACGGGGGTGGAAAACATTCGGG
AAGCGATCGCCTTCCCTCGGACGCCGGGAAGCGCAACGTTTTGAAATGGG
TGGCGGGAATATAGATTGCAAAACCCCGGCGAAGGAGGAGAGAAAGACCA
TTCGCATAGACCAATTGC
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protein sequence of rna268

>rna268-protein ID=rna268-protein|Name=rna268|organism=Nannochloropsis gaditana|type=polypeptide|length=231bp
MERCSESNSYLPSLLMPIASRQSARVIMNQPSWSQACEAQFSGMTLSNLL
QSDIRKLDGERVLLSKMEDVAGKVAGAFILQVVSVLDVTKPSSKQLSGDG
GQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKL
LLEPSTVLGVDGEVKILANNFQSSRLLERQYKLGKDMQAKPRNGANQGPP
AFDAFKPRTSGSRPDSEDRAPGARVSLVTGI
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mRNA from alignment at CM002455.1:686190..687349-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna268 ID=rna268|Name=rna268|organism=Nannochloropsis gaditana|type=mRNA|length=1160bp|location=Sequence derived from alignment at CM002455.1:686190..687349- (Nannochloropsis gaditana)
ATGGAACGTTGCAGTGAAAGCAACTCATATTTGCCTTCTTTATTGATGCC
CATCGCATCCAGACAATCAGCACGCGTCATTATGAATCAGCCGTCCTGGT
CACAAGCATGTGAGGCTCAATTTTCTGGGATGACTTTGTCAAATCTTCTC
CAGGTCGGTTGCTATTTATTTTTAAAACCCATCTGGACTTTACCCGCTTG
GTCGGTTGCTGTAATTATCCATCTTCATATTTTTCCACTCATGAGGCTTG
TTACTGACACATCAATCAGAGCGACATTCGAAAACTAGATGGAGAACGTG
TGCTACTGTCTAAGATGGAGGACGTCGCAGGGAAAGTTGCCGGAGCTTTC
ATTCTCCAGGTTGTGAGCGTGCTTGACGTAACAAAGCCGAGCAGCAAACA
ACTGAGTGGCGACGGTGGGCAGGGACGCGTCTTGATGTTGCGTGTCACAG
ATGGGTCAAAGAAGTATTCTGCCATCGAACTGGCTCGTATACCCAAGCTT
AGCTTGGATACACCGCCGGGGACTAAAATCCTGCTCAAGAACGTTCGATA
CGTAAAGCATAAATTGCTCCTGGAGCCAAGCACTGTATTGGGCGTGGATG
GAGAGGTAAAAATTCTTGCCAACAACTTCCAAAGCAGCCGTCTCCTTGAA
CGGCAATACAAACTGGGCAAAGACATGCAAGCGAAACCGAGGAACGGCGC
GAATCAAGGGCCGCCAGCGTTTGATGCGTTCAAGCCTCGGACCTCGGGGT
CCAGGCCTGACAGCGAGGATCGCGCCCCAGGGGCTCGCGTATCCCTGGTT
GGGAATGGCATCAAAAGCGCTTTTCCTCCTGAAACTGCTTCCACGTCCGC
TGGTGGAAAGGAAGGGGCCTCGCATGCTCCGCGGGGCGCTGACCAGGACC
GTGTGCCTAGCCAGAAGCACGAGAGGGAGAATCTCAGCAAAGGGCGCGGG
CAGTCCCGGGACCTTGGGCGTGGCGGCGGTCGCAAGGGGGGGGGCAGCGA
TAGAGAAGGGCGGCAGGGCGGGGAGCGAGGGAGAAAGGGTGAAAGGGGAG
GAAGGAGAGGTGGTCGAAGTGGGCGGGGGGCCTCTGGAGGCCCGCCGACG
GCTCCCACTGGTCCGAGCATTCACTCCCTTGCGTCCCATTTCCAGGTGAC
TGGGATCTGA
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Coding sequence (CDS) from alignment at CM002455.1:686190..687349-

>rna268 ID=rna268|Name=rna268|organism=Nannochloropsis gaditana|type=CDS|length=2088bp|location=Sequence derived from alignment at CM002455.1:686190..687349- (Nannochloropsis gaditana)
GTGACTGGGATCTGAAGCGACATTCGAAAACTAGATGGAGAACGTGTGCT
ACTGTCTAAGATGGAGGACGTCGCAGGGAAAGTTGCCGGAGCTTTCATTC
TCCAGGTTGTGAGCGTGCTTGACGTAACAAAGCCGAGCAGCAAACAACTG
AGTGGCGACGGTGGGCAGGGACGCGTCTTGATGTTGCGTGTCACAGATGG
GTCAAAGAAGTATTCTGCCATCGAACTGGCTCGTATACCCAAGCTTAGCT
TGGATACACCGCCGGGGACTAAAATCCTGCTCAAGAACGTTCGATACGTA
AAGCATAAATTGCTCCTGGAGCCAAGCACTGTATTGGGCGTGGATGGAGA
GGTAAAAATTCTTGCCAACAACTTCCAAAGCAGCCGTCTCCTTGAACGGC
AATACAAACTGGGCAAAGACATGCAAGCGAAACCGAGGAACGGCGCGAAT
CAAGGGCCGCCAGCGTTTGATGCGTTCAAGCCTCGGACCTCGGGGTCCAG
GCCTGACAGCGAGGATCGCGCCCCAGGGGCTCGCGTATCCCTGATGGAAC
GTTGCAGTGAAAGCAACTCATATTTGCCTTCTTTATTGATGCCCATCGCA
TCCAGACAATCAGCACGCGTCATTATGAATCAGCCGTCCTGGTCACAAGC
ATGTGAGGCTCAATTTTCTGGGATGACTTTGTCAAATCTTCTCCAGGTGA
CTGGGATCTGAAGCGACATTCGAAAACTAGATGGAGAACGTGTGCTACTG
TCTAAGATGGAGGACGTCGCAGGGAAAGTTGCCGGAGCTTTCATTCTCCA
GGTTGTGAGCGTGCTTGACGTAACAAAGCCGAGCAGCAAACAACTGAGTG
GCGACGGTGGGCAGGGACGCGTCTTGATGTTGCGTGTCACAGATGGGTCA
AAGAAGTATTCTGCCATCGAACTGGCTCGTATACCCAAGCTTAGCTTGGA
TACACCGCCGGGGACTAAAATCCTGCTCAAGAACGTTCGATACGTAAAGC
ATAAATTGCTCCTGGAGCCAAGCACTGTATTGGGCGTGGATGGAGAGGTA
AAAATTCTTGCCAACAACTTCCAAAGCAGCCGTCTCCTTGAACGGCAATA
CAAACTGGGCAAAGACATGCAAGCGAAACCGAGGAACGGCGCGAATCAAG
GGCCGCCAGCGTTTGATGCGTTCAAGCCTCGGACCTCGGGGTCCAGGCCT
GACAGCGAGGATCGCGCCCCAGGGGCTCGCGTATCCCTGATGGAACGTTG
CAGTGAAAGCAACTCATATTTGCCTTCTTTATTGATGCCCATCGCATCCA
GACAATCAGCACGCGTCATTATGAATCAGCCGTCCTGGTCACAAGCATGT
GAGGCTCAATTTTCTGGGATGACTTTGTCAAATCTTCTCCAGGTGACTGG
GATCTGAAGCGACATTCGAAAACTAGATGGAGAACGTGTGCTACTGTCTA
AGATGGAGGACGTCGCAGGGAAAGTTGCCGGAGCTTTCATTCTCCAGGTT
GTGAGCGTGCTTGACGTAACAAAGCCGAGCAGCAAACAACTGAGTGGCGA
CGGTGGGCAGGGACGCGTCTTGATGTTGCGTGTCACAGATGGGTCAAAGA
AGTATTCTGCCATCGAACTGGCTCGTATACCCAAGCTTAGCTTGGATACA
CCGCCGGGGACTAAAATCCTGCTCAAGAACGTTCGATACGTAAAGCATAA
ATTGCTCCTGGAGCCAAGCACTGTATTGGGCGTGGATGGAGAGGTAAAAA
TTCTTGCCAACAACTTCCAAAGCAGCCGTCTCCTTGAACGGCAATACAAA
CTGGGCAAAGACATGCAAGCGAAACCGAGGAACGGCGCGAATCAAGGGCC
GCCAGCGTTTGATGCGTTCAAGCCTCGGACCTCGGGGTCCAGGCCTGACA
GCGAGGATCGCGCCCCAGGGGCTCGCGTATCCCTGATGGAACGTTGCAGT
GAAAGCAACTCATATTTGCCTTCTTTATTGATGCCCATCGCATCCAGACA
ATCAGCACGCGTCATTATGAATCAGCCGTCCTGGTCACAAGCATGTGAGG
CTCAATTTTCTGGGATGACTTTGTCAAATCTTCTCCAG
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Synonyms
Publications