EWM30393.1, cds268 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30393.1 vs. NCBI_GenBank
Match: gi|585113053|gb|EWM30393.1| (uncharacterized protein Naga_100026g48 [Nannochloropsis gaditana]) HSP 1 Score: 468.003 bits (1203), Expect = 8.917e-167 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 Query: 1 MERCSESNSYLPSLLMPIASRQSARVIMNQPSWSQACEAQFSGMTLSNLLQSDIRKLDGERVLLSKMEDVAGKVAGAFILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLLLEPSTVLGVDGEVKILANNFQSSRLLERQYKLGKDMQAKPRNGANQGPPAFDAFKPRTSGSRPDSEDRAPGARVSLVTGI 231 MERCSESNSYLPSLLMPIASRQSARVIMNQPSWSQACEAQFSGMTLSNLLQSDIRKLDGERVLLSKMEDVAGKVAGAFILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLLLEPSTVLGVDGEVKILANNFQSSRLLERQYKLGKDMQAKPRNGANQGPPAFDAFKPRTSGSRPDSEDRAPGARVSLVTGI Sbjct: 1 MERCSESNSYLPSLLMPIASRQSARVIMNQPSWSQACEAQFSGMTLSNLLQSDIRKLDGERVLLSKMEDVAGKVAGAFILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLLLEPSTVLGVDGEVKILANNFQSSRLLERQYKLGKDMQAKPRNGANQGPPAFDAFKPRTSGSRPDSEDRAPGARVSLVTGI 231
BLAST of EWM30393.1 vs. NCBI_GenBank
Match: gi|1004137379|gb|KXZ45405.1| (hypothetical protein GPECTOR_55g311 [Gonium pectorale]) HSP 1 Score: 83.5741 bits (205), Expect = 6.556e-15 Identity = 60/185 (32.43%), Postives = 93/185 (50.27%), Query Frame = 0 Query: 46 LSNLLQSDIRKLDGERVLLSKMEDVAGKVAGAFILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLLLEPSTVLGVDGEVKILANNFQSSRLLERQYKLGKDMQAKPRNGANQG-----PPAFDAFKP-----------RTSGSRP 214 + +++ D++KL G+ L + + V G +LQV+ V DV++PS ++ +G GG R+L LR+TDG A+E R+ +LS + PGTK+LL N +LL P + + G V+ LA +++ +R+Y +PR GA G P F F P RTS S P Sbjct: 25 VKDIVNQDLKKL-GKGALPENVSRTSTAVKGPVVLQVLQVFDVSRPSLRESAGGGGSDRLLCLRLTDGKVTCKAVEYQRVEQLSEELAPGTKVLLSNANVKDGVILLNPKCIKVLGGRVEALAAAWET----QRRYG----GVERPRAGAAAGEDGETAPPFRHFIPGRDDKAAKLSGRTSASAP 200
BLAST of EWM30393.1 vs. NCBI_GenBank
Match: gi|1072991270|ref|XP_018446372.1| (PREDICTED: tudor domain-containing protein 3 [Raphanus sativus]) HSP 1 Score: 83.1889 bits (204), Expect = 6.783e-15 Identity = 68/221 (30.77%), Postives = 110/221 (49.77%), Query Frame = 0 Query: 4 CSESNSYLPSLLMPIAS-----RQSARVIMNQPSWSQACEAQFSGMTLSNLLQSDIRKLDGERVLLSKMEDVAGKVAGAFILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLL-LEPSTVLGVDGEVKILANNFQSSRLLERQY-KLGKDMQAKPRNG-ANQGPPAFDAFKPRTSGSRPDS 216 C + + YL +L++ I+S Q+ ++ + EA+ LL DIR + G+ + + + G +LQ+ SV DVTK S+++ G RVL L +TDG + SA+E + IP L+ D PGTK+ L+N V+ L+ L P V + G V+ L + +Q ++R+Y L + + + G A GPP F+ + RT DS Sbjct: 21 CFKDSDYLKTLVIQISSSIGGSNQTGAIV-------DSVEAE--------LLNMDIRLIGGKSLPDATELRRCSHLQGPKVLQISSVRDVTKSSAEEFLGSSTGKRVLKLVLTDGKTEISALEFSHIPSLNNDVTPGTKVRLENKAVVRDGLVCLTPKEVTVLGGHVQSLFDEWQ----MKRKYASLSRSSGRQSQEGKAGDGPPPFEELQIRTGSHHRDS 222
BLAST of EWM30393.1 vs. NCBI_GenBank
Match: gi|302834830|ref|XP_002948977.1| (hypothetical protein VOLCADRAFT_89400 [Volvox carteri f. nagariensis] >gi|300265722|gb|EFJ49912.1| hypothetical protein VOLCADRAFT_89400 [Volvox carteri f. nagariensis]) HSP 1 Score: 81.6481 bits (200), Expect = 3.851e-14 Identity = 49/164 (29.88%), Postives = 86/164 (52.44%), Query Frame = 0 Query: 44 MTLSNLLQSDIRKLDGERVLLSKMEDVAGKVAGAFILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLLLEPSTVLGVDGEVKILANNFQSSRLLERQYKLGKDMQAKPRNGANQGPPAFDAFKP 207 L +++ D++K+ G+ L + + + G +LQ+ SV DV++P+S++ + G R+L +R+TDG A+E R+ +LS + PPGTK+LL N +LL P ++ + G V LA +++ R R + + + P + PP F F P Sbjct: 1090 FVLQDVINQDLKKI-GKAALPDDVNRTSTTLKGPLVLQISSVTDVSRPASRECAAGSGADRLLCVRLTDGKLSCKALEYQRVDQLSENLPPGTKVLLSNATVKNGVVLLNPKSIKVLGGRVDHLAEAWETQR---RYGGVERPKASGPGDDGEMAPP-FRHFVP 1248
BLAST of EWM30393.1 vs. NCBI_GenBank
Match: gi|635366635|emb|CCI45108.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 79.337 bits (194), Expect = 3.920e-14 Identity = 56/134 (41.79%), Postives = 76/134 (56.72%), Query Frame = 0 Query: 79 ILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLLL--EPSTVLGVDGEVKILANNFQSSRLLERQYKLGKDMQAKPRNGA---NQGPPAFDAFKP 207 + QV+SVL++ +PS+KQ+ G + +L L++TDG KY AI L IPKLS+ T PGTK+LLK K K LL E + VLG G+V R L Q+K KD++ + R A PP F F+P Sbjct: 47 LFQVISVLNIAQPSAKQMVP-GLRPALLQLKLTDGQNKYVAIALEDIPKLSVSTAPGTKLLLKCCIIRKGKFLLSKENAQVLG--GQV----------RELMEQWKTQKDLRERKRACAADQEDPPPVFTDFEP 167
BLAST of EWM30393.1 vs. NCBI_GenBank
Match: gi|635366636|emb|CCI45109.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 79.7221 bits (195), Expect = 4.786e-14 Identity = 56/134 (41.79%), Postives = 76/134 (56.72%), Query Frame = 0 Query: 79 ILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLLL--EPSTVLGVDGEVKILANNFQSSRLLERQYKLGKDMQAKPRNGA---NQGPPAFDAFKP 207 + QV+SVL++ +PS+KQ+ G + +L L++TDG KY AI L IPKLS+ T PGTK+LLK K K LL E + VLG G+V R L Q+K KD++ + R A PP F F+P Sbjct: 70 LFQVISVLNIAQPSAKQMVP-GLRPALLQLKLTDGQNKYVAIALEDIPKLSVSTAPGTKLLLKCCIIRKGKFLLSKENAQVLG--GQV----------RELMEQWKTQKDLRERKRACAADQEDPPPVFTDFEP 190
BLAST of EWM30393.1 vs. NCBI_GenBank
Match: gi|641861726|gb|KDO80414.1| (hypothetical protein CISIN_1g014129mg [Citrus sinensis]) HSP 1 Score: 77.0258 bits (188), Expect = 8.258e-13 Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 0 Query: 45 TLSNLLQSDIRKLDGERVLLSKMEDVAGKVAGAFILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLL-LEPSTVLGVDGEVKILANNFQSSRLLERQYKLGKDMQAKP-RNGANQGPPAFDAFK 206 T S LL +D++ + G+ L + G +LQV SV D+++ S ++ SG+ G R+L L +TDG + +AIE + IP + D PGTK+ L+N V ++ L P+ V + G V L +Q + R+Y + +P + GPP F+ F+ Sbjct: 51 TESELLNTDLKSIGGKS--LPDPTRKFSHIQGPIVLQVASVRDISRSSIEEFSGNPGSNRLLKLVLTDGHIEITAIEYSHIPSIPYDVVPGTKVRLENKVPVHSGIVCLNPNVVTVLGGVVASLHEEWQ----MNRKYSVFSRSSLRPSQESGGGGPPPFEKFQ 208
BLAST of EWM30393.1 vs. NCBI_GenBank
Match: gi|568843747|ref|XP_006475760.1| (PREDICTED: tudor domain-containing protein 3 [Citrus sinensis]) HSP 1 Score: 77.0258 bits (188), Expect = 1.029e-12 Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 0 Query: 45 TLSNLLQSDIRKLDGERVLLSKMEDVAGKVAGAFILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLL-LEPSTVLGVDGEVKILANNFQSSRLLERQYKLGKDMQAKP-RNGANQGPPAFDAFK 206 T S LL +D++ + G+ L + G +LQV SV D+++ S ++ SG+ G R+L L +TDG + +AIE + IP + D PGTK+ L+N V ++ L P+ V + G V L +Q + R+Y + +P + GPP F+ F+ Sbjct: 51 TESELLNTDLKSIGGKS--LPDPTRKFSHIQGPIVLQVASVRDISRSSIEEFSGNPGSNRLLKLVLTDGHIEITAIEYSHIPSIPYDIVPGTKVRLENKVPVHSGIVCLNPNVVTVLGGVVASLHEEWQ----MNRKYSVFSRSSLRPSQESGGGGPPPFEKFQ 208
BLAST of EWM30393.1 vs. NCBI_GenBank
Match: gi|674233478|gb|KFK26243.1| (hypothetical protein AALP_AA8G221900 [Arabis alpina]) HSP 1 Score: 77.0258 bits (188), Expect = 1.038e-12 Identity = 65/219 (29.68%), Postives = 106/219 (48.40%), Query Frame = 0 Query: 4 CSESNSYLPSLLMPIAS-----RQSARVIMNQPSWSQACEAQFSGMTLSNLLQSDIRKLDGERVLLSKMEDVAGKVAGAFILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLL-LEPSTVLGVDGEVKILANNFQSSRLLERQY-KLGKDMQAKPRNGANQGPPAFDAFKPRTSGSRPD 215 C YL +L+ I+S Q+ V+ ++ EA+ LL DIR + G+ + S + G +LQ+ SV DVT+ S+++ G RVL +TDG + SA+E + IP ++ D PGTK+ L+N ++ L+ L P V + G V+ LA +Q ++++Y L + Q + A GPP F+ + RT + D Sbjct: 27 CFGDVDYLKTLITEISSLIGGGNQTGAVV-------ESVEAE--------LLNMDIRLIGGKSLPDSTELRRCSHLQGPKVLQISSVKDVTRSSAEEFLGSSNGKRVLKFSLTDGKIEISALEYSHIPSINNDVTPGTKVRLENKAVIREGLVCLTPKEVTVMGGYVQSLAEEWQ----MKKKYASLSRKSQ---ESKAGDGPPPFEELQIRTGSNHRD 223
BLAST of EWM30393.1 vs. NCBI_GenBank
Match: gi|922566128|ref|XP_013611340.1| (PREDICTED: tudor domain-containing protein 3 isoform X2 [Brassica oleracea var. oleracea] >gi|923550255|ref|XP_013736380.1| PREDICTED: tudor domain-containing protein 3-like isoform X2 [Brassica napus]) HSP 1 Score: 76.2554 bits (186), Expect = 1.751e-12 Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 0 Query: 47 SNLLQSDIRKLDGERVLLSKMEDVAGKVAGAFILQVVSVLDVTKPSSKQLSGDGGQGRVLMLRVTDGSKKYSAIELARIPKLSLDTPPGTKILLKNVRYVKHKLL-LEPSTVLGVDGEVKILANNFQSSRLLERQY-KLGKDMQAKPRNG-ANQGPPAFDAFKPRTSGSRPDS 216 + LL DIR + G+ + + + G +LQ+ SV DVTK S+++ G RVL L +TDG + SA+E + IP L+ D PGTK+ L+N V+ L+ L P V + G V+ L +Q ++R+Y L + + + G A GPP F+ + R + DS Sbjct: 61 AELLNMDIRLIGGKSLPDATELRRCSHLQGPKVLQISSVRDVTKSSAEEFLGSSTGKRVLKLVLTDGKIEISALEYSHIPSLNNDVTPGTKVRLENKAVVRDGLVCLTPKEVTVLGGHVQSLFEEWQ----MKRKYASLSRSSGRQSQEGKAGDGPPPFEELQIRAGYHQRDS 229 The following BLAST results are available for this feature:
BLAST of EWM30393.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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