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Properties
| Property Name | Value |
|---|
| Product | 50s ribosomal protein l27 |
| Orig transcript id | gnl|cribi|Naga_100008g34.7895.mrna |
| Orig protein id | gnl|cribi|Naga_100008g34.7895 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:915872..916536 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2667 ID=rna2667|Name=rna2667|organism=Nannochloropsis gaditana|type=mRNA|length=990bp
ATGGTCATATTACCCCACCATGCGCCACATTCAAGCTCCCTGACAATCTT
ACTTCTCATTACGATCAGCCATTCGCGGGCATTTTATATTTTGGCGCCTC
TCGTTGAGAGATCACGCACAGTTTTATCGGCCGTCTCCTCCGACGCGCCT
CCTGCTCCGTCTTCCAATAGACCAGTCGTGATTTACGAAGGCTTTTGGCA
TGAAGCCAAGGCCATGATGGACGCTCGTCAAAGCTCTTTGCCTTGGAAAT
CACAAACAATTCCTTTTGACTTACAGCGCAAGGTATGTACAACACCAGCC
AAGGGCAAGCGTCTCGAAACAGTCACAGTTGCTGAGGTGTTTGCCTACAC
TGTCCCCGGCCGCATTCGCCAAGCTCGGGCAGCCGTCCTGTCAACCATTC
CTGAGGAAGCCCCTCCTAAAGTTCTGAATTTTGTCGTCTTCCCAGATTCT
TCGTACGATTTGCCGATATTCGGCGCAGATTTCGTTTCCTTGCCTGGCGG
ACATTTGGTAGTGTTGGACTTTCAGCCGGTATCAAGCACATCCTTGTCGG
TGGCGGAAAAAGCTCTACGCGACATACATGCTCATTACACCGCATTGCTG
CCAAGCCATGGGGAGATTCCAGACGCAGCTCGGTCATTTTTTTCGCCTTA
CTACATGTTTATCAGGGTGGAAGGGGACGCGCTGGTGGAGACGACCGTGC
TTGCGGCTTTTAAAGCGTACTTTTCGGCATATCTTGACCTGGTCGAGCAT
GCCTCTCCCATACCCGTCGAAGAAACATCTAGATTATTGGAGGTCCAAGA
GGGACACCGCAATTATGCGACTTATCGGGCAGTGAATGACCCGGCGCGAG
GGATGCTTACCCGGATGTATGGGCGTTCGTGGACAGAGCGGCTGATCTAC
GAGGTGCTGTTTGAGCAAGCAGATAGGGAGTTGGAGGATGATGGAGGAAT
AACGGTGGAAGCTGTGAGGTCTGGGGGTACGGGGGGCTGA back to topprotein sequence of rna2667 >rna2667-protein ID=rna2667-protein|Name=rna2667|organism=Nannochloropsis gaditana|type=polypeptide|length=183bp
MSISSLPHGNDIYHLYLPVLTDVLSLWPSSGSMLSRIWSPSTWSSTRHLV
HSGTPASNAAITSALRRSEMVWGGMSCRTATKKAGGSSKNGRDSPGQRLG
VKKFGGQEVIAGNILVRQRGLTFKAGDGVGVGRDYTLFALRPGWVKFTYD
VHSKKKYVRIAACSPHPHDQKAVSEVDEEEAVA back to topmRNA from alignment at CM002459.1:915872..916536+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2667 ID=rna2667|Name=rna2667|organism=Nannochloropsis gaditana|type=mRNA|length=665bp|location=Sequence derived from alignment at CM002459.1:915872..916536+ (Nannochloropsis gaditana)
AAAGGCTGCTAGGTTGACTTCCTAATCGGACGTTGCACGTGAGTTTTCGA
CCGTCGCTTGTATGtccatctcttctcttccgcATGGTAATGACATATAC
CACCTGTACCTCCCCGTGTTAACTGATGTACTTTCCCTTTGGCCCTCCTC
AGGGAGCATGCTCTCCAGGATTTGGAGCCCGAGTACTTGGAGTTCGACCA
GACACTTGGTGCATTCGGGCACTCCCGCATCCAATGCCGCAATCACGTCT
GCCCTCAGACGCAGCGAGATGGTTTGGGGAGGCATGAGCTGCCGCACAGC
GAccaagaaggcggggggctcGTCGAAAAACGGACGTGACTCACCAGGCC
AGCGTCTGGGTGTCAAGAAATTTGGGGGGCAAGAAGTGATAGCAGGCAAT
ATTTTGGTGCGGCAACGAGGGTTGACATTCAAGGCGGGTGATGGTGTAGG
CGTTGGGAGGGACTATACGCTTTTCGCCTTAAGACCAGGCTGGGTAAAGT
TTACGTACGACGTACATAGCAAGAAAAAATATGTCCGAATTGCTGCTTGT
AGCCCACATCCTCACGACCAAAAGGCAGTGTCGGAggtggatgaagagga
agcggtggcGTGAAATGTGAGGGTGGTCCCAAAAAATAATGTCGCGTCTC
TAAAAAACGGTTTCC back to topCoding sequence (CDS) from alignment at CM002459.1:915872..916536+ >rna2667 ID=rna2667|Name=rna2667|organism=Nannochloropsis gaditana|type=CDS|length=552bp|location=Sequence derived from alignment at CM002459.1:915872..916536+ (Nannochloropsis gaditana)
ATGtccatctcttctcttccgcATGGTAATGACATATACCACCTGTACCT
CCCCGTGTTAACTGATGTACTTTCCCTTTGGCCCTCCTCAGGGAGCATGC
TCTCCAGGATTTGGAGCCCGAGTACTTGGAGTTCGACCAGACACTTGGTG
CATTCGGGCACTCCCGCATCCAATGCCGCAATCACGTCTGCCCTCAGACG
CAGCGAGATGGTTTGGGGAGGCATGAGCTGCCGCACAGCGAccaagaagg
cggggggctcGTCGAAAAACGGACGTGACTCACCAGGCCAGCGTCTGGGT
GTCAAGAAATTTGGGGGGCAAGAAGTGATAGCAGGCAATATTTTGGTGCG
GCAACGAGGGTTGACATTCAAGGCGGGTGATGGTGTAGGCGTTGGGAGGG
ACTATACGCTTTTCGCCTTAAGACCAGGCTGGGTAAAGTTTACGTACGAC
GTACATAGCAAGAAAAAATATGTCCGAATTGCTGCTTGTAGCCCACATCC
TCACGACCAAAAGGCAGTGTCGGAggtggatgaagaggaagcggtggcGT
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