rna2656, rna2656 (mRNA) Nannochloropsis gaditana

Overview
Namerna2656
Unique Namerna2656
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1626
Alignment locationCM002459.1:897241..897577 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100008g21.7897.mrna
Orig protein idgnl|cribi|Naga_100008g21.7897
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:897241..897577 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100008g21gene2540Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2656rna2656-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28005.1cds2648Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2656 ID=rna2656|Name=rna2656|organism=Nannochloropsis gaditana|type=mRNA|length=1626bp
ATGTCATCGTCAAGTGAAGTGCCCTCAGTACTTTTGCCGGTCCAAGACGT
GGATGTCCTCCTACGCAGACTCCTGGCACCGGAGAAGGAACACGAAAGCG
AACGGATGGATTGTGGATATGGTAGAGAACACATATATGATTCTGATGAG
CTTCTCTTGTCCAATGTGGCGTCGTTGCTGGCTTTCCCCCTTGGTGGGAT
CTGCTCGATCTTTCTGTTGCTCTTGGGAACGTACACACATTTTTGCACAG
CTTGCAGGCGGTTTATCGTGGCTTGGGCCGATCAGATCGAGGCGACGTGG
CAATCTTTGAGACTATCCCGTTTTCACCTGCAGGATCATAGGAATATCAA
TATCAAACGACCAAAGCTCATGCCACGCATGATATCACACGGAACAAATA
GTAAGACAGGACTGTATTGGTGTGGTTTGGGAGATGTCTGCGAACGCGAC
GATCTCATTTTCACACCGTATTTCGACCCCAAAAAGCCTTCTGTCGTATA
TGTGCATGGTTATCAGCCGCGAACCATCATTCGATGTTTTCGTGAGAGCC
TGAATTGGGGGGACAATGACAACGAGTTTGGGCTGGATATGAACGCGGCG
GATCATTGGCTGAAAGCTGGTTGGAACGTAGGTGTTTTTTACTGGTCTTC
ATACGCGGATGAAGACTACATACACGATGCCGAGGCCAAGATTTGGTCGA
ATCAGACGTCAGTGGGCATGCGCTATCGGAGTTTAACAAAATGCGGGACC
AGAGTAAAGTGGCGATACGTCTCCTCAGACGTGCCTTGTGTCGCGCATCA
ACTCGCAAGCGTACTTCGTCAGCGCTTTACTTCCGATACGGCAGGGTATC
GGCTTGTGGGGCATAGTTTGGGCGCACAGGTCGTCATTCATGCTGCCACG
TTGCTTGCGCGGGCGAAACGCCGGCAGGCAAACGCCGTCTGCTTGCAAGA
TGGGATTGTCAATTGCGACGTGACCCTAGACGAGAAAACAAGGGGAAAAG
TGCAGGGAGTTCCGAATGTTGCGCCCGGAATGGAATACTTAGGACCAGGA
GGCACGTCTGATGCCGATTATATTCCCTACACGGTCGGCTCCTCGCGCAC
TAGGGAGGCTTCTTTCCTCTTACCCACTCGGATTGCGTTGTTGGACGCCT
TCTTCACGTTGGAGCCCAAGAGATACGTCGGGTGGCGCTCGCTAGCTAGT
GTTTTGAAAGAAGAATTGGCGAACCTGGTCCAAGAGGAGGATGTTGTGTT
TGAGCAATACCGGACTTCTCTCCTGTCCTTTGCGGCCAATTTTCACCTGA
AACCCTTCACAGCCTTTTTTGACTTGAACCCCAAGCATATCCCGTGGTGG
AAGCTCCGGGCCCGCCATGTTTGTGCACCGTACCTGTATTTTCATTCAAT
GGCTTCCCTAGAGGTGGGAAGAAGGGTGATGAAGGATGTGGGCGGGGCTT
GGACGGCTTTCTGGGGCCAAATCTACCATCAAGACATGCTCGAGGATGAA
GACTCTTTTCGCGGCATAGCCACAACACCCGACGCGCATTTGCGCTTGCT
CATGCAGAGATATGCAATGGAGGGAATATGGGAACTTTTCACTCATATTT
CATGCTACCCTCTCTCTCGGCATTAG
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protein sequence of rna2656

>rna2656-protein ID=rna2656-protein|Name=rna2656|organism=Nannochloropsis gaditana|type=polypeptide|length=69bp
MKRHNAQLCLVPVEGADAAVHNLVDAVREGDHSCGDRDWRDSTSVGVGLR
TCDGTRLIPTLTSPQLTFV
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mRNA from alignment at CM002459.1:897241..897577-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2656 ID=rna2656|Name=rna2656|organism=Nannochloropsis gaditana|type=mRNA|length=337bp|location=Sequence derived from alignment at CM002459.1:897241..897577- (Nannochloropsis gaditana)
ATGAAAAGACACAATGCACAGCTCTGTCTCGTACCCGTCGAGGGAGCAGA
TGCAGCAGTCCACAATCTTGTAGACGCCGTCAGGGAGGGAGACCACTCCT
GTGGGTGGTTGGGCGTGTAGACGCCGTCAGGGAGGGAGACCACTCCTGTG
GGTGGTTGGGCGTGCATGGGATAATGCGTCATGATGTGTTGGCATCGTCA
ACATCCCCCATTCGCCCCTCGATAACCCCAGTGATAGAGATTGGAGAGAC
TCTACCAGCGTTGGCGTCGGGCTCAGGACTTGTGATGGAACTCGGTTGAT
ACCAACGCTGACTTCACCACAGCTAACCTTCGTGTGA
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Coding sequence (CDS) from alignment at CM002459.1:897241..897577-

>rna2656 ID=rna2656|Name=rna2656|organism=Nannochloropsis gaditana|type=CDS|length=420bp|location=Sequence derived from alignment at CM002459.1:897241..897577- (Nannochloropsis gaditana)
TGATAGAGATTGGAGAGACTCTACCAGCGTTGGCGTCGGGCTCAGGACTT
GTGATGGAACTCGGTTGATACCAACGCTGACTTCACCACAGCTAACCTTC
GTGTGAATGAAAAGACACAATGCACAGCTCTGTCTCGTACCCGTCGAGGG
AGCAGATGCAGCAGTCCACAATCTTGTAGACGCCGTCAGGGAGGGAGACC
ACTCCTGTGGTGATAGAGATTGGAGAGACTCTACCAGCGTTGGCGTCGGG
CTCAGGACTTGTGATGGAACTCGGTTGATACCAACGCTGACTTCACCACA
GCTAACCTTCGTGTGAATGAAAAGACACAATGCACAGCTCTGTCTCGTAC
CCGTCGAGGGAGCAGATGCAGCAGTCCACAATCTTGTAGACGCCGTCAGG
GAGGGAGACCACTCCTGTGG
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Synonyms
Publications