EWM28005.1, cds2648 (CDS) Nannochloropsis gaditana

Overview
NameEWM28005.1
Unique Namecds2648
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:897474..897577 -
Alignment locationCM002459.1:897241..897346 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28005.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100008g21.7897.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:897474..897577 -
CM002459.1supercontigCM002459.1:897241..897346 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28005.1 vs. NCBI_GenBank
Match: gi|585110346|gb|EWM28005.1| (hypothetical protein Naga_100008g21 [Nannochloropsis gaditana])

HSP 1 Score: 142.895 bits (359), Expect = 2.350e-43
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 
Query:    1 MKRHNAQLCLVPVEGADAAVHNLVDAVREGDHSCGDRDWRDSTSVGVGLRTCDGTRLIPTLTSPQLTFV 69
            MKRHNAQLCLVPVEGADAAVHNLVDAVREGDHSCGDRDWRDSTSVGVGLRTCDGTRLIPTLTSPQLTFV
Sbjct:    1 MKRHNAQLCLVPVEGADAAVHNLVDAVREGDHSCGDRDWRDSTSVGVGLRTCDGTRLIPTLTSPQLTFV 69
The following BLAST results are available for this feature:
BLAST of EWM28005.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110346|gb|EWM28005.1|2.350e-43100.00hypothetical protein Naga_100008g21 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2656rna2656Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications