|
|
Properties
| Property Name | Value |
|---|
| Product | atp synthase gamma |
| Orig transcript id | gnl|cribi|Naga_100008g4.7919.mrna |
| Orig protein id | gnl|cribi|Naga_100008g4.7919 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:865199..866912 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2641 ID=rna2641|Name=rna2641|organism=Nannochloropsis gaditana|type=mRNA|length=1099bp
GGAAGCTTAGAATTGTGTTCCTGATTGCTGATCCTTTTTTTTCGGAACCT
TTTCCCCCTAGACTCGTATACTCCTACCAGGCTCGATTCCACCAAGTCAC
ATGGACTCCAGAGTGAGTCTCTCCGCAGACAACAGCACTGCAACAACAAC
AACTGCCACCACAAGCACTACTCTCTCTACCGTCAGCGGATCGGCCGACA
CTAATGCTGCGCAACGTCGTCGTCCAACATATTTCTTTCGCACTGCAGAC
TCGCTACCGGATGACGGATTTAGTCCCCGTTTAGAGGGTCGCTCGTATTT
AAGTGAGGGGTTCCAAATGCTCCTGTGGTCCGTGGTACTTAACGGCTTGC
TGGCACTAGTGGTACTGTGGCTGGTTGAGGGTTTGCTGCAACCGGTCCTG
ATAGCGATCCTTGAACTAACGCCCTCCCCGCGCACAAGCAAAGTCTTGAC
CGCACTTCTTACTGTCGTCTTACTTCAAGGCGGGGGGCAAGGATCGATAA
TATTACTGATGGCCTTGGGAATCTCAGCAGTGGTGGTGGGCATGTCTCAG
TCCGACGGCGTCTTTGTACCTTGCTTTCTCGTCTTGCTCGTGTGTCTGGG
GGCGGTTTTGCGGGAAGGCGGATGGAATGCGTATAAGAACGGGTCGGTTG
CCTCACGTAACACGTGGGGAGATGCATCTCCACTAAGTGCTGCTTCAGGT
GTTCTTAAGGCTTTCTCGGGAATGGGAGGTGCGCCAGAAGGGGGCCGGAG
GAATTTATGGGGAGCCTAGTGTGGCAGAGGTGCGAAGCAAGAGGAATTCG
AAGTTCGATCTGAGTACCGCAGGGTGTCAACAAACAGACTGAACATATAA
GCACGTAACATGCGAACTCGAGGTGAGACGCGTCGTGGAATTGTGCTGCT
TGTGGGTAGAAACGTGCAAGCTGAAATATTTCCCGCTCTGTGATATGTGC
ATATGACCCACGGCCTCCAGGCGACTGAGAAGGAAGAATCCATTAACTCT
CCCGGAGAGGTAAAGATGAAGAACAAGTTCACAGCACACACCATCCACGT
GAGGCTTCCAGCCAAATCCCAGACGCGTGTTGACAGATCAAGCAAGCCC back to topprotein sequence of rna2641 >rna2641-protein ID=rna2641-protein|Name=rna2641|organism=Nannochloropsis gaditana|type=polypeptide|length=285bp
MVARGMASEKEIAARMKSTAGINKITKTMKMVAASKMRGDEDRLKAGRPF
QKWVDGFTPPPVLLEDFAKSLDKLPQSNLLVIITTDRGLCGGVNSSLARV
MKHMVPALDKEKKDVQLFIVGDKGRATMGRPLGEFITQINSDSGTPYNFS
LAAALAQDVTQIKADAVHVVFNRFRSAIAYEATVKTLYPPAALTGEPYVE
YEFEPDTKTEVLDDMYEMAIATTMFTSMLESAAAEQSSRMNAMENASKNG
EDLIKELSIQYNRARQSRITTELVEIISGASALEG back to topmRNA from alignment at CM002459.1:865199..866912+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2641 ID=rna2641|Name=rna2641|organism=Nannochloropsis gaditana|type=mRNA|length=1714bp|location=Sequence derived from alignment at CM002459.1:865199..866912+ (Nannochloropsis gaditana)
TTCCCGCTTGACGCCCTGGCGTGCGCGGTAGTTGTCGTGTGCATGTCTTG
CAAGTCTGGGGATCAACGGCTTCGGAAATTTTCAGGGGGTACGGTCGCTC
TGGTCAGCACCCTGCCGCCCCCGTCTTGCCCCGTGCTtaatcctccctct
ccacgttCACCATTCCCACCGACGCAACCACACTGATCCCTCAACAACCA
TCACAGGAGACGAAGATGTCTGCTAGTCTGGGCTATCAAGCCGCGCGAAG
GCTCATCCTGGGCGGAGCCACCAGGTACGACTTAACTCGAGCGGATAGGA
AAGTCCCCTCATTGAGAGATGCGGGGCTGCGCATGTGCGCTTGCGGGGTC
ACTTCTTGAACTATCCATTCCTTATTCTTCCTGCCATTTAAATGTCGTCT
GACTCATCGTCGCCCTCTCTGGCCGGTGGCTTTTCCCAACTCCAGGATGG
TCGCACGCGGGATGGCGTCAGAGAAGGAAATTGCGGCACGCATGAAGTCG
ACTGCAGGCATCAACAAGATCACCAAGACAATGAAGATGGTGGCAGCTTC
CAAGATGCGCGGCGATGAGGACCGTCTCAAGGCAGGGCGCCCATTCCAGA
AATGGGTGGATGGCTTCACCCCACCCCCGGTCTTGCTGGAGGACTTTGCC
AAAAGCCTGGACAAGCTCCCGCAGAGCAACCTCCTCGTGATCATCACCAC
GGACCGAGGCCTCTGCGGCGGCGTCAACTCGTCCCTGGCCCGTGTCATGA
AGCATATGGTTCCGGCcttggacaaggagaagaaggacgtgCAGCTTTTC
ATCGTGGGGGACAAAGGACGCGCCACCATGGGGCGTCCGCTGGGTGAATT
TATCACACAAATCAATTCCGACTCCGGGACCCCGTACAATTTCTCCTTGG
CCGCAGCCCTTGCGCAAGACGTGACGCAGATCAAGGCGGACGCGGTTCAC
GTGGTTTTCAACCGGTTCCGCTCGGCCATCGCCTACGAAGCCACGGTGAA
GACGCTCTACCCCCCTGCGGCCTTGACTGGCGAGCCCTACGTGGAGTACG
AATTCGAGCCCGACACCAAGAcggaggtgctggacgaTATGTACGAGATG
GCGATTGCCACTACCATGTTCACCTCCATGCTGGAAAGTGCGGCGGCCGA
GCAGTCTTCCCGAATGAATGCGATGGAGAACGCGTCGAAGAACGGAGAGG
ACTTGATCAAGGAGCTTTCCATCCAATACAATCGAGCCCGGCAGTCTCGG
ATCACTACCGAGCTTGTGGAGATCATCTCGGGGGCTTCGGCTTTGGAGGG
CTAGGGAGAAGATtggcggagaggagaggtTTGAAACTGTCTagtcaaga
gggaggaggaaggagggaggccttggaagacTTGTCCCGGCCTTGGTTCG
ATTAAAGGGAGGAGTTAGTAGCTGCAGTATCTTAGGGACCGTCTCTTGCA
TACAGGATAGGTGGCACAAAGAGGATAGAGGTGCCTTGTGGGGTAGCCAA
GGGCGGGTGGGGCGTTTGTCGGGGGAAAAATGACCGTCCACGTGGTTGGC
ACCGGCGAAGCGCAAAGCTATCTTGCGAAAACGAAAAAAGAAACAACGGA
CAACCAATCCACTCAGCGCGAGAGATCCAGGCGTATGTATGGGGTCGAAT
GAGGCGGTTATTGTTTCGGAGCCCCTGTGCTGTTCAGTCTCCTGACCGAC
ACTATTGACTACCG back to topCoding sequence (CDS) from alignment at CM002459.1:865199..866912+ >rna2641 ID=rna2641|Name=rna2641|organism=Nannochloropsis gaditana|type=CDS|length=858bp|location=Sequence derived from alignment at CM002459.1:865199..866912+ (Nannochloropsis gaditana)
ATGGTCGCACGCGGGATGGCGTCAGAGAAGGAAATTGCGGCACGCATGAA
GTCGACTGCAGGCATCAACAAGATCACCAAGACAATGAAGATGGTGGCAG
CTTCCAAGATGCGCGGCGATGAGGACCGTCTCAAGGCAGGGCGCCCATTC
CAGAAATGGGTGGATGGCTTCACCCCACCCCCGGTCTTGCTGGAGGACTT
TGCCAAAAGCCTGGACAAGCTCCCGCAGAGCAACCTCCTCGTGATCATCA
CCACGGACCGAGGCCTCTGCGGCGGCGTCAACTCGTCCCTGGCCCGTGTC
ATGAAGCATATGGTTCCGGCcttggacaaggagaagaaggacgtgCAGCT
TTTCATCGTGGGGGACAAAGGACGCGCCACCATGGGGCGTCCGCTGGGTG
AATTTATCACACAAATCAATTCCGACTCCGGGACCCCGTACAATTTCTCC
TTGGCCGCAGCCCTTGCGCAAGACGTGACGCAGATCAAGGCGGACGCGGT
TCACGTGGTTTTCAACCGGTTCCGCTCGGCCATCGCCTACGAAGCCACGG
TGAAGACGCTCTACCCCCCTGCGGCCTTGACTGGCGAGCCCTACGTGGAG
TACGAATTCGAGCCCGACACCAAGAcggaggtgctggacgaTATGTACGA
GATGGCGATTGCCACTACCATGTTCACCTCCATGCTGGAAAGTGCGGCGG
CCGAGCAGTCTTCCCGAATGAATGCGATGGAGAACGCGTCGAAGAACGGA
GAGGACTTGATCAAGGAGCTTTCCATCCAATACAATCGAGCCCGGCAGTC
TCGGATCACTACCGAGCTTGTGGAGATCATCTCGGGGGCTTCGGCTTTGG
AGGGCTAG back to top
|