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Properties
| Property Name | Value |
|---|
| Product | tbc1 domain member 20 |
| Orig transcript id | gnl|cribi|Naga_100026g52.10621.mrna |
| Orig protein id | gnl|cribi|Naga_100026g52.10621 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:665119..667705 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna264 ID=rna264|Name=rna264|organism=Nannochloropsis gaditana|type=mRNA|length=1131bp
GTCCACGACTGGGCCCAGAACTTAACCCATTAGCCATTATGACATTTTAC
CTTTTTGTCCATAAATCGCGTGCGCTTGTCGTAGCTTCACTAATTGAGCT
CGGGCTACTGCAACACACAGAGAGCGACACGCCTGGATGACACTTCTCGT
AATGTGAGAGAGCGAGTGGATGATTATGCAAACACCAAATGCGTTTGATA
CTCCAGCGGCATTACGCCAGAAAATTCGGGGGGGGCGCCACACAGGCACC
ACGGCAGGTTGCTGCCCTGGATTCGTGCAAGCCAACCTCGTCATCCTCCC
GATAGAACACGCTCTTGAATTCATGACCTTCTGCATCCGCAATCCGAAGC
CTTGCCCGCTGCTGGATATTACAGATCCTGGCAGTCCCCATCCACCCACG
TGGTTGGCGAATGACGGAGCCGACGTGCGAACAGATCTCCCAATGTACCG
AGTGTGGCAAAACGGGAAACTGCTCAAAGAAGCCGATGACGTCACTGACT
ACTGGCGAGATGACTTCGTGGTCTTCTTTTTGGGATGTTCCTTCTCCTTC
GAAGAAGCTTTGGTGAAAGCCAATCTCTCTGTGCGTCACCTTGAAGAAGG
CAAGAATGTACCAATGTACAAGACGAACATTCCATGCCGTCCTGCTGGCC
CGTTTCAAGGAAATATGGTTGTGTCCATGCGCCCCTATCGCCCAGAGCAA
TTAGGCAGGGTTTCAGAGGTCACATCACGCATGAAGGCTGTACATGGAGG
ACCCATTCATACAGGTGATCCTGCAGCGATAGGCATTATCGATCTAGGCC
AGCCAGACTACGGTGATGCTGTGTCGATCGCATCAGACGAAGTGCCTGTC
TTTTTTGCTTGTGGTGTCACCCCCCAGAATGTGATTCTGGATTGTAGATT
ACCAGGAATCGCCATCACTCATGCTCCAGGCGCCATGTTTGTTACTGATG
TCTTGAATGACTTCCTGACACAGAACTAGGATTCCTCCGGGCTTCCGTTT
TGAAGGACCCGCACTCGAGCATTTCATCTTAACCATTAACGCTTCACTTT
CCATGGGGCTCCATTTGCCATAAGTAATCACGCTTCCGAAAAGAAAATGC
TGTGATGTGCACCTGCGCCGATGACATACGA back to topprotein sequence of rna264 >rna264-protein ID=rna264-protein|Name=rna264|organism=Nannochloropsis gaditana|type=polypeptide|length=428bp
MSENGAGAKSSKCDIAQKIKVIQALIVQNPVPLDELRSLALSSDGGFISN
DLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLPQ
AKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDL
CFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRAC
GLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILE
GKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKL
VQSQGSPFLRELARSREVHGLNFPPPWYQREALPDWILLENRRRRDKRVV
RSKHTRERRRQAHLAGVSMPAPPAKSPPEGPRAFGDRFWTYVSPSASFAS
TLVACAALVGCMAVILKLSERKPTGSTS back to topmRNA from alignment at CM002455.1:665119..667705- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna264 ID=rna264|Name=rna264|organism=Nannochloropsis gaditana|type=mRNA|length=2587bp|location=Sequence derived from alignment at CM002455.1:665119..667705- (Nannochloropsis gaditana)
GGAGAGGTTGAGGCGTCGCGTCGGAAGGGAAGAAGGAGACGACAGGCCTG
TCCGCCAGCCATATCATCGAAATCACCGCTTATTGCGTGCATTTCTCATT
TCGATCCACCATAGAAGCTGCCGAGGGAACGTCACGTGCTAGACCGCTCT
ATGTCTGAGAATGGCGCGGGGGCAAAATCAAGCAAGTGTGACATCGCACA
AAAGATAAAAGTGATCCAAGCCCTGATTGTACAGAATCCCGTACCACTCG
ATGAGTTGCGAAGTTTGGTGAGAACTTACAAGGCTACGGCATCATGCGCT
AACCTACCCTGTCCCCTCTGTCCTGAACTTATCAAACAGTGTTCTTTGCC
ACATTTGACCCTTACTTCTTTACCATACTCAAACAACACCAGGCTCTGTC
CTCTGATGGGGGTTTCATCTCCAACGATCTCCGACAGGTGATTTGGCCAA
AGCTTTTAGGGTTTAACCGCTTCGAGCTGCGACCTCCTTTTCAAAATTAT
GTGGCTCGTAATCAGTGGAGTGACCAGATCAGCCGTGATGTGGCTCGTTC
TCTATGGCATTACCGTCTGCCTCAGGCGAAAAAACGAAAGCGCGGAGGCA
GGAGGCGTCTTTTGGCTGACGTAAGAGAAAAACAAATAAACGTAGTGGGG
AGACGGTTAGATCAGACCTGATTGCTCAATATTGAGGTTGGATAGTGAAA
CGAAAGTCTTGTTGACTGAACAAGCCTTTGTAATGTCCTCGACCCTCTCA
CAGATGGTGAACGCGCTGATGGCCAAGGACTCTACTCTGCATTACTACCA
AGGCCTCCACGATGTCTTCTCCGTCTTCGTCCTGGTGCTGACCGAGGACC
CCGACCTCTGCTTTGCCGTCGCAGAGCGAGTGGCCCTCTTCTTCATGGGC
GACTTTACTCGACGGTCAGATTTTTCCGTCCTGATCCCGCTGCTCGATCT
CTTGATTCCCCTGATCGAGGCCTTCGACGCCGACGTCGGGAGCTGCCTGC
GTGCCTGTGGCCTCCACGCCTACGTGTGCCTGCCCTGGGTCATCGCCTGG
TGGGCCCATGACTGCCACGATCTAGCCATGATCGCCCGGCTTTTCGACGC
TTTTTTGTCAGCCCCTCCTCTATTCCCGATCTACGTGGCCGCAGCTCTCA
TCTTGGAGGGTAAGTCCGATCTTTTTGCCCTGGAGAGCCGAGACTTCTCC
GCCGTCCATCGTTTCCTCTCCCGCCTTCCATCCCAGCCTGATTTACCTGT
GGAAGCAATCCTTGCGCGGGCGCATGGCATGCTGCAGGCTTTCCCTCCCG
CCAAGCTGGTACAATCGCAAGGTAGCCCTTTCTTGCGGGAGCTGGCTCGG
TCCCGAGAAGTGCACGGGCTGAACTTCCCTCCTCCGTGGTACCAGCGGGA
AGCACTTCCGGATTGGATCCTTTTAGAAAACCGGCGGCGGCGAGATAAAA
GGGTGGTACGCAGCAAACACACGCGGGAGCGGCGTCGGCAAGCGCACCTT
GCGGGGGTGTCGATGCCTGCGCCGCCAGCGAAGAGCCCACCAGAGGGGCC
TAGGGCGTTCGGTGATCGATTTTGGACCTATGTCTCCCCGTCAGCGTCCT
TCGCGTCAACATTGGTAGCTTGTGCCGCTTTAGTGGGGTGCATGGCAGTC
ATCCTCAAGCTGAGCGAACGTAAGCCAACGGGAAGTACAAGCTGAGAAAT
TGTATACCGTTCGTCTTTTGAATAAGCAAAGCTCACTTTGAAATGCATCT
CATGAGGTGGAAAGAATAAACATCGTATGTCATCGGCGCAGGTGCACATC
ACAGCATTTTCTTTTCGGAAGCGTGATTACTTATGGCAAATGGAGCCCCA
TGGAAAGTGAAGCGTTAATGGTTAAGATGAAATGCTCGAGTGCGGGTCCT
TCAAAACGGAAGCCCGGAGGAATCCTAGTTCTGTGTCAGGAAGTCATTCA
AGACATCAGTAACAAACATGGCGCCTGGAGCATGAGTGATGGCGATTCCT
GGTAATCTACAATCCAGAATCACATTCTGGGGGGTGACACCACAAGCAAA
AAAGACAGGCACTTCGTCTGATGCGATCGACACAGCATCACCGTAGTCTG
GCTGGCCTAGATCGATAATGCCTATCGCTGCAGGATCACCTGTATGAATG
GGTCCTCCATGTACAGCCTTCATGCGTGATGTGACCTCTGAAACCCTGCC
TAATTGCTCTGGGCGATAGGGGCGCATGGACACAACCATATTTCCTTGAA
ACGGGCCAGCAGGACGGCATGGAATGTTCGTCTTGTACATTGGTACATTC
TTGCCTTCTTCAAGGTGACGCACAGAGAGATTGGCTTTCACCAAAGCTTC
TTCGAAGGAGAAGGAACATCCCAAAAAGAAGACCACGAAGTCATCTCGCC
AGTAGTCAGTGACGTCATCGGCTTCTTTGAGCAGTTTCCCGTTTTGCCAC
ACTGTATAGTTTCGAGGAAGGAAAAACATCAGTTTGATGGCGTTCAGAAA
CTTACTCTTTGGCATTCCTTTTGCTTCACCCATGGTGCCGTAACAAGCCG
AGAGTAAGCGTGTCATGAATCTTAGCATCCTTTACTG back to topCoding sequence (CDS) from alignment at CM002455.1:665119..667705- >rna264 ID=rna264|Name=rna264|organism=Nannochloropsis gaditana|type=CDS|length=3861bp|location=Sequence derived from alignment at CM002455.1:665119..667705- (Nannochloropsis gaditana)
ATGGTGAACGCGCTGATGGCCAAGGACTCTACTCTGCATTACTACCAAGG
CCTCCACGATGTCTTCTCCGTCTTCGTCCTGGTGCTGACCGAGGACCCCG
ACCTCTGCTTTGCCGTCGCAGAGCGAGTGGCCCTCTTCTTCATGGGCGAC
TTTACTCGACGGTCAGATTTTTCCGTCCTGATCCCGCTGCTCGATCTCTT
GATTCCCCTGATCGAGGCCTTCGACGCCGACGTCGGGAGCTGCCTGCGTG
CCTGTGGCCTCCACGCCTACGTGTGCCTGCCCTGGGTCATCGCCTGGTGG
GCCCATGACTGCCACGATCTAGCCATGATCGCCCGGCTTTTCGACGCTTT
TTTGTCAGCCCCTCCTCTATTCCCGATCTACGTGGCCGCAGCTCTCATCT
TGGAGGGTAAGTCCGATCTTTTTGCCCTGGAGAGCCGAGACTTCTCCGCC
GTCCATCGTTTCCTCTCCCGCCTTCCATCCCAGCCTGATTTACCTGTGGA
AGCAATCCTTGCGCGGGCGCATGGCATGCTGCAGGCTTTCCCTCCCGCCA
AGCTGGTACAATCGCAAGGTAGCCCTTTCTTGCGGGAGCTGGCTCGGTCC
CGAGAAGTGCACGGGCTGAACTTCCCTCCTCCGTGGTACCAGCGGGAAGC
ACTTCCGGATTGGATCCTTTTAGAAAACCGGCGGCGGCGAGATAAAAGGG
TGGTACGCAGCAAACACACGCGGGAGCGGCGTCGGCAAGCGCACCTTGCG
GGGGTGTCGATGCCTGCGCCGCCAGCGAAGAGCCCACCAGAGGGGCCTAG
GGCGTTCGGTGATCGATTTTGGACCTATGTCTCCCCGTCAGCGTCCTTCG
CGTCAACATTGGTAGCTTGTGCCGCTTTAGTGGGGTGCATGGCAGTCATC
CTCAAGCTGAGCGAACGTAAGCCAACGGGAAGTACAAGCTGAGCTCTGTC
CTCTGATGGGGGTTTCATCTCCAACGATCTCCGACAGGTGATTTGGCCAA
AGCTTTTAGGGTTTAACCGCTTCGAGCTGCGACCTCCTTTTCAAAATTAT
GTGGCTCGTAATCAGTGGAGTGACCAGATCAGCCGTGATGTGGCTCGTTC
TCTATGGCATTACCGTCTGCCTCAGGCGAAAAAACGAAAGCGCGGAGGCA
GGAGGCGTCTTTTGGCTGACATGTCTGAGAATGGCGCGGGGGCAAAATCA
AGCAAGTGTGACATCGCACAAAAGATAAAAGTGATCCAAGCCCTGATTGT
ACAGAATCCCGTACCACTCGATGAGTTGCGAAGTTTGATGGTGAACGCGC
TGATGGCCAAGGACTCTACTCTGCATTACTACCAAGGCCTCCACGATGTC
TTCTCCGTCTTCGTCCTGGTGCTGACCGAGGACCCCGACCTCTGCTTTGC
CGTCGCAGAGCGAGTGGCCCTCTTCTTCATGGGCGACTTTACTCGACGGT
CAGATTTTTCCGTCCTGATCCCGCTGCTCGATCTCTTGATTCCCCTGATC
GAGGCCTTCGACGCCGACGTCGGGAGCTGCCTGCGTGCCTGTGGCCTCCA
CGCCTACGTGTGCCTGCCCTGGGTCATCGCCTGGTGGGCCCATGACTGCC
ACGATCTAGCCATGATCGCCCGGCTTTTCGACGCTTTTTTGTCAGCCCCT
CCTCTATTCCCGATCTACGTGGCCGCAGCTCTCATCTTGGAGGGTAAGTC
CGATCTTTTTGCCCTGGAGAGCCGAGACTTCTCCGCCGTCCATCGTTTCC
TCTCCCGCCTTCCATCCCAGCCTGATTTACCTGTGGAAGCAATCCTTGCG
CGGGCGCATGGCATGCTGCAGGCTTTCCCTCCCGCCAAGCTGGTACAATC
GCAAGGTAGCCCTTTCTTGCGGGAGCTGGCTCGGTCCCGAGAAGTGCACG
GGCTGAACTTCCCTCCTCCGTGGTACCAGCGGGAAGCACTTCCGGATTGG
ATCCTTTTAGAAAACCGGCGGCGGCGAGATAAAAGGGTGGTACGCAGCAA
ACACACGCGGGAGCGGCGTCGGCAAGCGCACCTTGCGGGGGTGTCGATGC
CTGCGCCGCCAGCGAAGAGCCCACCAGAGGGGCCTAGGGCGTTCGGTGAT
CGATTTTGGACCTATGTCTCCCCGTCAGCGTCCTTCGCGTCAACATTGGT
AGCTTGTGCCGCTTTAGTGGGGTGCATGGCAGTCATCCTCAAGCTGAGCG
AACGTAAGCCAACGGGAAGTACAAGCTGAGCTCTGTCCTCTGATGGGGGT
TTCATCTCCAACGATCTCCGACAGGTGATTTGGCCAAAGCTTTTAGGGTT
TAACCGCTTCGAGCTGCGACCTCCTTTTCAAAATTATGTGGCTCGTAATC
AGTGGAGTGACCAGATCAGCCGTGATGTGGCTCGTTCTCTATGGCATTAC
CGTCTGCCTCAGGCGAAAAAACGAAAGCGCGGAGGCAGGAGGCGTCTTTT
GGCTGACATGTCTGAGAATGGCGCGGGGGCAAAATCAAGCAAGTGTGACA
TCGCACAAAAGATAAAAGTGATCCAAGCCCTGATTGTACAGAATCCCGTA
CCACTCGATGAGTTGCGAAGTTTGATGGTGAACGCGCTGATGGCCAAGGA
CTCTACTCTGCATTACTACCAAGGCCTCCACGATGTCTTCTCCGTCTTCG
TCCTGGTGCTGACCGAGGACCCCGACCTCTGCTTTGCCGTCGCAGAGCGA
GTGGCCCTCTTCTTCATGGGCGACTTTACTCGACGGTCAGATTTTTCCGT
CCTGATCCCGCTGCTCGATCTCTTGATTCCCCTGATCGAGGCCTTCGACG
CCGACGTCGGGAGCTGCCTGCGTGCCTGTGGCCTCCACGCCTACGTGTGC
CTGCCCTGGGTCATCGCCTGGTGGGCCCATGACTGCCACGATCTAGCCAT
GATCGCCCGGCTTTTCGACGCTTTTTTGTCAGCCCCTCCTCTATTCCCGA
TCTACGTGGCCGCAGCTCTCATCTTGGAGGGTAAGTCCGATCTTTTTGCC
CTGGAGAGCCGAGACTTCTCCGCCGTCCATCGTTTCCTCTCCCGCCTTCC
ATCCCAGCCTGATTTACCTGTGGAAGCAATCCTTGCGCGGGCGCATGGCA
TGCTGCAGGCTTTCCCTCCCGCCAAGCTGGTACAATCGCAAGGTAGCCCT
TTCTTGCGGGAGCTGGCTCGGTCCCGAGAAGTGCACGGGCTGAACTTCCC
TCCTCCGTGGTACCAGCGGGAAGCACTTCCGGATTGGATCCTTTTAGAAA
ACCGGCGGCGGCGAGATAAAAGGGTGGTACGCAGCAAACACACGCGGGAG
CGGCGTCGGCAAGCGCACCTTGCGGGGGTGTCGATGCCTGCGCCGCCAGC
GAAGAGCCCACCAGAGGGGCCTAGGGCGTTCGGTGATCGATTTTGGACCT
ATGTCTCCCCGTCAGCGTCCTTCGCGTCAACATTGGTAGCTTGTGCCGCT
TTAGTGGGGTGCATGGCAGTCATCCTCAAGCTGAGCGAACGTAAGCCAAC
GGGAAGTACAAGCTGAGCTCTGTCCTCTGATGGGGGTTTCATCTCCAACG
ATCTCCGACAGGTGATTTGGCCAAAGCTTTTAGGGTTTAACCGCTTCGAG
CTGCGACCTCCTTTTCAAAATTATGTGGCTCGTAATCAGTGGAGTGACCA
GATCAGCCGTGATGTGGCTCGTTCTCTATGGCATTACCGTCTGCCTCAGG
CGAAAAAACGAAAGCGCGGAGGCAGGAGGCGTCTTTTGGCTGACATGTCT
GAGAATGGCGCGGGGGCAAAATCAAGCAAGTGTGACATCGCACAAAAGAT
AAAAGTGATCCAAGCCCTGATTGTACAGAATCCCGTACCACTCGATGAGT
TGCGAAGTTTG back to top
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