EWM30367.1, cds264 (CDS) Nannochloropsis gaditana

Overview
NameEWM30367.1
Unique Namecds264
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:667439..667555 -
Alignment locationCM002455.1:667086..667313 -
Alignment locationCM002455.1:666011..666952 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30367.1
Producttbc1 domain member 20
Orig transcript idgnl|cribi|Naga_100026g52.10621.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:667439..667555 -
CM002455.1supercontigCM002455.1:667086..667313 -
CM002455.1supercontigCM002455.1:666011..666952 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
Homology
BLAST of EWM30367.1 vs. NCBI_GenBank
Match: gi|585113027|gb|EWM30367.1| (tbc1 domain member 20 [Nannochloropsis gaditana])

HSP 1 Score: 868.611 bits (2243), Expect = 0.000e+0
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0
Query:    1 MSENGAGAKSSKCDIAQKIKVIQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLPQAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQSQGSPFLRELARSREVHGLNFPPPWYQREALPDWILLENRRRRDKRVVRSKHTRERRRQAHLAGVSMPAPPAKSPPEGPRAFGDRFWTYVSPSASFASTLVACAALVGCMAVILKLSERKPTGSTS 428
            MSENGAGAKSSKCDIAQKIKVIQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLPQAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQSQGSPFLRELARSREVHGLNFPPPWYQREALPDWILLENRRRRDKRVVRSKHTRERRRQAHLAGVSMPAPPAKSPPEGPRAFGDRFWTYVSPSASFASTLVACAALVGCMAVILKLSERKPTGSTS
Sbjct:    1 MSENGAGAKSSKCDIAQKIKVIQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLPQAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQSQGSPFLRELARSREVHGLNFPPPWYQREALPDWILLENRRRRDKRVVRSKHTRERRRQAHLAGVSMPAPPAKSPPEGPRAFGDRFWTYVSPSASFASTLVACAALVGCMAVILKLSERKPTGSTS 428          
BLAST of EWM30367.1 vs. NCBI_GenBank
Match: gi|1027015816|ref|XP_016605095.1| (hypothetical protein SPPG_07452 [Spizellomyces punctatus DAOM BR117] >gi|907090741|gb|KNC97055.1| hypothetical protein SPPG_07452 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 173.326 bits (438), Expect = 2.766e-46
Identity = 114/317 (35.96%), Postives = 175/317 (55.21%), Query Frame = 0
Query:   33 LDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLPQAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRAC-GLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQSQGSPFLRELARSR-EVHGLNFPPPWYQREALPDWILLENRRRRDK 347
            L+ LR+LA +S GGF+++ +R+ +WP LL  +  + R  F       + + QI+ DV RSL H   P   + +    R+ L++++  ++++ S LHYYQG HDV SV +LVL   P L  A  E +ALF++ DF   S  S +  +  LL PLI         CL +  G   Y CL WVI W++HD  DL+ IARLFD  +++ PL P+Y+AAA++L     L  LE+ ++S VH FLS+ PS  +L  E ++ +A+ M +  PP  + +S   P  R    +R +V     P      + LP  +L ++ R  +K
Sbjct:   36 LEALRTLA-ASKGGFVNHSIRRKVWPLLL-HSANKQREMFSEGADEQRDASQIALDVNRSLAHLLQPDTGETRLETLRKELSNLLLTVLSRHSYLHYYQGFHDVASVLLLVL--KPTLASACLEPLALFYLRDFMAPSLQSSMNQI-SLLFPLIALVSPATHECLSSIEGFLPYFCLSWVITWYSHDIDDLSRIARLFDFLIASNPLMPVYLAAAVVLSQNEQLVELEA-EYSTVHHFLSKFPSDANL--EMLIKQAYNMYKLHPPEAVQKSAKLPLGRASVVNRFKVDFERLPLTQEYDDQLPQKLLNQHVREVEK 344          
BLAST of EWM30367.1 vs. NCBI_GenBank
Match: gi|1013936490|gb|KYQ90188.1| (RabGAP/TBC domain-containing protein [Dictyostelium lacteum])

HSP 1 Score: 163.31 bits (412), Expect = 3.397e-42
Identity = 111/411 (27.01%), Postives = 204/411 (49.64%), Query Frame = 0
Query:   16 AQKIKVIQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLPQAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQSQGSPFLRELARSREVHGLNFPPPWYQREALPDWILLENRRRRDKRVVRSKHTRERRRQAHLAGVSMPAPPAKSPPEGPRAFGDRFWTYVSPSASFASTLVACAALVGCMAVILKLSERKPTGS 426
            A+KI++IQ  + Q+P+ +D L+  ++S + GF++  LR+ IWP LL  +   L    Q  +   + +DQ+ +DV RS+W  R  + K + R  ++  L ++VNA+++    LHY+QG H++ SV +LV   D  L FA+ ER++L+   D      F+ ++ +L LL PLI+  +  + + +    +     + WV+ W++H+  +L   +R++D FLS+ PL  +Y +A +I   K  L  LE   +  VH + + LP   +LP++ ++ + + +L   PP KL QS+    L E +         +P  W +                 K+++ SK T  ++ Q+                E  R   D+  +Y + +  +  T       +  ++V + LS R P+ +
Sbjct:   10 AKKIRIIQGYLNQSPIDIDGLKQCSVS-EFGFVNAALRRRIWPLLLNIDTKNLIQHRQKIIDHPE-TDQVLKDVERSMW--RFTKGKSQLRNRKKPELMNIVNAILSIHKELHYFQGYHEIGSVLLLV--TDESLAFAMLERLSLYHFRD-CMYPTFASVLNILHLLFPLIQQINTQLYNFIIQSQVQPLFAISWVLTWFSHNLEELEYASRVYDFFLSSHPLASLYFSAVVIDYLKDGLLDLEC-SYDTVHAYFTHLPE--NLPLDHLIKQTNDLLLKIPPNKL-QSKSKIHLGEESPMNR-----YPYDWMK-----------------KQIINSKLTTSKKYQS----------------EQYRNNADKKRSYSTANQIYKYTFFVVFGSISLLSVFVYLSIRSPSTT 371          
BLAST of EWM30367.1 vs. NCBI_GenBank
Match: gi|919023508|ref|XP_013395669.1| (PREDICTED: TBC1 domain family member 20-like isoform X1 [Lingula anatina])

HSP 1 Score: 162.155 bits (409), Expect = 6.248e-42
Identity = 110/361 (30.47%), Postives = 187/361 (51.80%), Query Frame = 0
Query:   11 SKCDIAQKIKV--IQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLPQAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQSQGSPFLRELARSREVHGLNFPP-PWYQREALPDWILLENRRRRDKRVVRSKHTRERR-----RQAH 363
            SK D+ +K KV  I+  +  +PV +D LR LA+S  GG I+++LR+  WPKLL  N + +    +N      + +Q+  DVARSL  +  P  +  +R   +  L D++  ++ K+  LHYYQG HD+   F+L+++ED  + FA+ ++++   + DF  ++       +L  L P++   + ++   +         CL W+I W+ H   D   + RL+D FL+  P+ PIYVAAA++L  + ++   E  D + +H  LS++P    LP E ++++A  +   +PP KL Q        +L +S+ +   N+       R   PD +L   RR+      + K  +ERR     RQ H
Sbjct:   23 SKDDLTKKQKVAAIKKTLKSDPVDVDRLRQLAISR-GGLINDELRRQCWPKLLNVNIYGISKKPENLKEHRDY-NQVVLDVARSLKRFP-PGMRDEQRLVLQDQLIDVIMRVLVKNPELHYYQGYHDICVTFLLIVSED--IAFALVDQLSTNHLRDFMEKT-MEKTTKILSYLYPILGKANPELREFMELAETGTIFCLSWLITWFGHVLSDFRHVVRLYDFFLACHPMMPIYVAAAIVLYRQEEVLQCEC-DMAMIHSLLSKIPD--GLPYEQLISKAGDLYLQYPPEKLEQEANL----QLKKSQSI--TNYKKLKLSSRSQEPDSVLKARRRQ------KLKEQQERRLVVMNRQEH 362          
BLAST of EWM30367.1 vs. NCBI_GenBank
Match: gi|919023510|ref|XP_013395671.1| (PREDICTED: TBC1 domain family member 20-like isoform X2 [Lingula anatina])

HSP 1 Score: 160.614 bits (405), Expect = 1.815e-41
Identity = 94/295 (31.86%), Postives = 162/295 (54.92%), Query Frame = 0
Query:   11 SKCDIAQKIKV--IQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLPQAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQS 303
            SK D+ +K KV  I+  +  +PV +D LR LA+S  GG I+++LR+  WPKLL  N + +    +N      + +Q+  DVARSL  +  P  +  +R   +  L D++  ++ K+  LHYYQG HD+   F+L+++ED  + FA+ ++++   + DF  ++       +L  L P++   + ++   +         CL W+I W+ H   D   + RL+D FL+  P+ PIYVAAA++L  + ++   E  D + +H  LS++P    LP E ++++A  +   +PP KL Q 
Sbjct:   23 SKDDLTKKQKVAAIKKTLKSDPVDVDRLRQLAISR-GGLINDELRRQCWPKLLNVNIYGISKKPENLKEHRDY-NQVVLDVARSLKRFP-PGMRDEQRLVLQDQLIDVIMRVLVKNPELHYYQGYHDICVTFLLIVSED--IAFALVDQLSTNHLRDFMEKT-MEKTTKILSYLYPILGKANPELREFMELAETGTIFCLSWLITWFGHVLSDFRHVVRLYDFFLACHPMMPIYVAAAIVLYRQEEVLQCEC-DMAMIHSLLSKIPD--GLPYEQLISKAGDLYLQYPPEKLEQE 308          
BLAST of EWM30367.1 vs. NCBI_GenBank
Match: gi|330795896|ref|XP_003286006.1| (hypothetical protein DICPUDRAFT_149933 [Dictyostelium purpureum] >gi|325084004|gb|EGC37442.1| hypothetical protein DICPUDRAFT_149933 [Dictyostelium purpureum])

HSP 1 Score: 161.384 bits (407), Expect = 2.076e-41
Identity = 105/350 (30.00%), Postives = 185/350 (52.86%), Query Frame = 0
Query:   16 AQKIKVIQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLPQAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFL-SRLPSQPDLPVEAILARAHGMLQAFPPAKLVQSQGSPFLRELARSREVHGLNFPPPWYQREALPDWILLENRRRRD-KRVVRSKHTRERRRQAH 363
            A+KI+VIQ  + +NP+ ++ LR  A++ + GF++N LR+ IWP LL  +   +      ++  ++ +DQ+S+DV RS+W  R  + K + R  ++  L  +VN++++  S L+Y+QG H++ SV  L+L  D  L FA+ ER++L    D     +FS ++ LL+ + PL+   D +V   L   G+     + W++ W++H+  +L + AR++D FLS+ P+  +Y + ++I   +  L  LE   F ++H F  S LP   DL  + I+  A  ++   PP K+      P    L  S   H      PW       DW+ + N +R   K+ +   H   + ++ H
Sbjct:   10 AKKIRVIQDCL-ENPIDIEGLRMCAIT-EFGFVNNVLRKRIWPILLNIDTNNI-INHSEHIIDHKDTDQVSKDVERSMW--RFTRGKTQLRNRKKPELTRIVNSVLSLHSNLYYFQGYHEIASV--LLLITDESLAFAMLERLSLNHFSD-CMLPNFSEILKLLNYIFPLVSMVDQEVYDFLIKSGVQPMFAISWILTWFSHNLEELDLAARVYDYFLSSHPMASVYFSVSVITNLRDQLLKLEC-SFDSIHAFFTSNLPENLDL--DKIIFEADKLIDKIPPNKIQIISKEPL---LPTSPINHY-----PW-------DWMSINNAKRNSYKKTLLKNHKLSKNQKRH 333          
BLAST of EWM30367.1 vs. NCBI_GenBank
Match: gi|260834751|ref|XP_002612373.1| (hypothetical protein BRAFLDRAFT_121942 [Branchiostoma floridae] >gi|229297750|gb|EEN68382.1| hypothetical protein BRAFLDRAFT_121942 [Branchiostoma floridae])

HSP 1 Score: 159.844 bits (403), Expect = 5.508e-41
Identity = 101/297 (34.01%), Postives = 157/297 (52.86%), Query Frame = 0
Query:   14 DIAQKIKVIQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLP-QAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQSQGSPFL 309
            D   K K IQ  +  +P  +  LR LA+S DGG + +DLR+  WPKL+  N FE+ P   N  A   +  Q+  DV RS+   R P   K+ +R   +  L D++  ++ +   LHYYQG HD+   F+LV+ ED  L FA+ ++++ + + DF   S       +L  L+P++     ++   L    +     L W+I W+ H   D+  I RL+D FL+  PL PIY+AA ++L    D+  +E  + + VH  LSRLP   DLP E +++RA  +   +PP+ L +     FL
Sbjct:   40 DKKHKAKAIQEAMRSDPPDIANLRRLAIS-DGGLLRDDLRRKAWPKLMNVNVFEIPPKPANIRAHRDYR-QVVLDVERSM--RRFPANMKEEQRSRLQDQLVDIILRVLVRHPELHYYQGYHDICVTFLLVVGED--LAFAIMDKLSEYHLRDFMDES-MDRTRHILGYLMPIVGKAHPELRDFLERSDVGTIFALSWLITWYGHVLTDIRHIVRLYDFFLACHPLMPIYLAAQIVLYRSEDILRVEC-EMTMVHHTLSRLPE--DLPFEHLVSRAGDLFIQYPPSMLAKEAELEFL 326          
BLAST of EWM30367.1 vs. NCBI_GenBank
Match: gi|1143406643|ref|XP_019957589.1| (PREDICTED: TBC1 domain family member 20-like [Paralichthys olivaceus])

HSP 1 Score: 159.844 bits (403), Expect = 7.343e-41
Identity = 93/304 (30.59%), Postives = 168/304 (55.26%), Query Frame = 0
Query:    1 MSENGAGAKSSKCDIAQKIKVIQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFEL-RPPFQNYVARNQWSDQISRDVARSLWHYRLPQAK-KRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQ 302
            ++ENG+ ++   C   QK+  I   ++ +PV ++ LR+ A  S GG ++++LR+ +WPKLL  N ++L   P ++    ++  +Q+  DV RS+   R P+     +R   +  L D++  ++ ++  LHYYQG HDV    +LV+ E   +  A+ + ++ + + DF   +  S    +L+ L+P++E  DA++   +    +     L W+I W+ H   +     RL+D FL++ PL PIY+AA ++L  + ++   E  D + VH  LSR+P   DLP E ++ARA  +   +PP+ L +
Sbjct:   15 VNENGSSSRELDCGRKQKLAEIHRALISDPVDIETLRTTA-GSKGGLLTDELRRKVWPKLLNINVYDLPHKPGRDVRENHKDYNQVLLDVRRSM--KRFPKGMPSSERAVLQEQLMDIILKVLKRNPQLHYYQGYHDVAVTLLLVVGER--MAIAMLDTLSNYHLRDFMDPTMDST-KHILNYLMPILEQVDAELHDFMIRAEVGTIFALSWLITWYGHVLSEFKHTLRLYDFFLASHPLMPIYLAATIVLHREKEVKQTEC-DMAMVHHLLSRIPQ--DLPYELLIARAQELFSQYPPSLLAK 309          
BLAST of EWM30367.1 vs. NCBI_GenBank
Match: gi|1126192477|ref|XP_019629239.1| (PREDICTED: TBC1 domain family member 20-like isoform X2 [Branchiostoma belcheri])

HSP 1 Score: 159.073 bits (401), Expect = 7.810e-41
Identity = 101/298 (33.89%), Postives = 157/298 (52.68%), Query Frame = 0
Query:   13 CDIAQKIKVIQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLP-QAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQSQGSPFL 309
             D   K K IQ  I  +P  +  LR LA+S DGG + +DLR+  WPKL+  N FE+ P   N  A   +  Q+  DV RS+   R P   K+ +R   +  L D++  ++ +   LHYYQG HD+   F+LV+ ED  L FA+ ++++ + + DF   S       +L  L+P++     ++   L    +     L W+I W+ H   D+  I RL+D FL+  PL PIY+AA ++L    D+  ++  + + VH  LSRLP   DLP E +++RA  +   +PP+ L +     FL
Sbjct:   29 TDKKHKAKAIQEAIRSDPPDIANLRRLAIS-DGGLLRDDLRRKAWPKLMNVNVFEIPPKPANIKAHRDYR-QVVLDVERSM--RRFPTNMKEEQRLRLQDQLVDIILRVLVRHPELHYYQGYHDICVTFLLVVGED--LAFAIMDKLSEYHLRDFMDES-MDRTRHILGYLMPIVGKAHPELREFLERSDVGTIFALSWLITWYGHVLTDIRHIVRLYDFFLACHPLMPIYLAAQIVLYRSEDILRVDC-EMTMVHHTLSRLPE--DLPFEHLVSRAGDLFIQYPPSMLAKEAELEFL 316          
BLAST of EWM30367.1 vs. NCBI_GenBank
Match: gi|1126192479|ref|XP_019629240.1| (PREDICTED: TBC1 domain family member 20-like [Branchiostoma belcheri])

HSP 1 Score: 159.073 bits (401), Expect = 1.101e-40
Identity = 101/298 (33.89%), Postives = 157/298 (52.68%), Query Frame = 0
Query:   13 CDIAQKIKVIQALIVQNPVPLDELRSLALSSDGGFISNDLRQVIWPKLLGFNRFELRPPFQNYVARNQWSDQISRDVARSLWHYRLP-QAKKRKRGGRRRLLADMVNALMAKDSTLHYYQGLHDVFSVFVLVLTEDPDLCFAVAERVALFFMGDFTRRSDFSVLIPLLDLLIPLIEAFDADVGSCLRACGLHAYVCLPWVIAWWAHDCHDLAMIARLFDAFLSAPPLFPIYVAAALILEGKSDLFALESRDFSAVHRFLSRLPSQPDLPVEAILARAHGMLQAFPPAKLVQSQGSPFL 309
             D   K K IQ  I  +P  +  LR LA+S DGG + +DLR+  WPKL+  N FE+ P   N  A   +  Q+  DV RS+   R P   K+ +R   +  L D++  ++ +   LHYYQG HD+   F+LV+ ED  L FA+ ++++ + + DF   S       +L  L+P++     ++   L    +     L W+I W+ H   D+  I RL+D FL+  PL PIY+AA ++L    D+  ++  + + VH  LSRLP   DLP E +++RA  +   +PP+ L +     FL
Sbjct:   39 TDKKHKAKAIQEAIRSDPPDIANLRRLAIS-DGGLLRDDLRRKAWPKLMNVNVFEIPPKPANIKAHRDYR-QVVLDVERSM--RRFPTNMKEEQRLRLQDQLVDIILRVLVRHPELHYYQGYHDICVTFLLVVGED--LAFAIMDKLSEYHLRDFMDES-MDRTRHILGYLMPIVGKAHPELREFLERSDVGTIFALSWLITWYGHVLTDIRHIVRLYDFFLACHPLMPIYLAAQIVLYRSEDILRVDC-EMTMVHHTLSRLPE--DLPFEHLVSRAGDLFIQYPPSMLAKEAELEFL 326          
The following BLAST results are available for this feature:
BLAST of EWM30367.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113027|gb|EWM30367.1|0.000e+0100.00tbc1 domain member 20 [Nannochloropsis gaditana][more]
gi|1027015816|ref|XP_016605095.1|2.766e-4635.96hypothetical protein SPPG_07452 [Spizellomyces pun... [more]
gi|1013936490|gb|KYQ90188.1|3.397e-4227.01RabGAP/TBC domain-containing protein [Dictyosteliu... [more]
gi|919023508|ref|XP_013395669.1|6.248e-4230.47PREDICTED: TBC1 domain family member 20-like isofo... [more]
gi|919023510|ref|XP_013395671.1|1.815e-4131.86PREDICTED: TBC1 domain family member 20-like isofo... [more]
gi|330795896|ref|XP_003286006.1|2.076e-4130.00hypothetical protein DICPUDRAFT_149933 [Dictyostel... [more]
gi|260834751|ref|XP_002612373.1|5.508e-4134.01hypothetical protein BRAFLDRAFT_121942 [Branchiost... [more]
gi|1143406643|ref|XP_019957589.1|7.343e-4130.59PREDICTED: TBC1 domain family member 20-like [Para... [more]
gi|1126192477|ref|XP_019629239.1|7.810e-4133.89PREDICTED: TBC1 domain family member 20-like isofo... [more]
gi|1126192479|ref|XP_019629240.1|1.101e-4033.89PREDICTED: TBC1 domain family member 20-like [Bran... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna264rna264Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications