rna2638, rna2638 (mRNA) Nannochloropsis gaditana

Overview
Namerna2638
Unique Namerna2638
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1245
Alignment locationCM002459.1:860295..861376 -

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Properties
Property NameValue
Productrna-binding protein 26
Orig transcript idgnl|cribi|Naga_100008g1.7906.mrna
Orig protein idgnl|cribi|Naga_100008g1.7906
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:860295..861376 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100008g1gene2522Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2638rna2638-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28014.1cds2630Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2638 ID=rna2638|Name=rna2638|organism=Nannochloropsis gaditana|type=mRNA|length=1245bp
GGCGGGCCCCAGGCCAAGCGCTCTCGGGAAGAGCCGGTTGCTTCGCCGCA
CCAGCACCAACAGCCGCGTCCTGCGTCCCGCCCGGCCCCTCACCCTGGCC
CGACTCCGCCCCTGTCACGGCCTCCGCCCCTGCCCCCTCCCCCCGCGCAC
GCGGGACAAGGGGCCCCTGCGGCCCGACTTGCCCCGCCCTCGGCCGCCTC
CCCGCCCGCGACGGGCCCTGCCCACGTGGCAGCCCTGACCCGCCAACGGC
TGGCGCTGGCCAAGAAGAAGGAAAGCTTGTACGCGACGCAGAAACAATTG
CGCGAACAGATGCTGGCGGCGAGTCTGGGCACGGGAAAAGGGAGGAAGGG
AGAGGGCCTGGAGCAGGCAAGGAGGGAGGTGGCGGCGGCGGAGGAGCGGC
TGAAAGGGGCGCAGAGGGAGGTGCAGGGCTTGCTGGAGGCGGTGGCGCGA
CTACCCGCGGTGGAAAGCTCAAGGGCAGAGCGGGGAAGTGGACTGGCAAG
GGCGATGGCTCCCTCGGCCGCGGGGGGGCGAGGAGGGGGAGGGGGAGGAA
GGGGAGGAAGGGTCGGGGAAGGCGGGGGAGGGCGGGACAGTGGAGGTCGC
CTCGTGTCCCGGAATCGCGTTCCCATGCGGATCGACCACCGGACCACGCA
TTTGAAGCTGTGCACGAGGCCACCGGGGCTGGCGGCGGCCTCGCTGCGTC
GCTTCTTCAGCAATTTCGGGACCGTGGAGGCGGTGGAAATGGCAGGGGGC
CAGGAGGAAAGCGGCCCGGCGGTGGTCAAATTTGCCACGCGCTGGGCTGC
CGAGAATGCGAAGGCGAAGGCCAAGTATGTGGGGAAGCATCCCTTGGTGC
TGGAGTGGCATGACCCTCGGACGGCCGGGAACGGGAAGGGGGAATTCAAT
GAGGTGAAGGCGGGCGGAGAGGAGGCGGGCGGAGAGGAGGCGGGGGGGGG
GAGGAGGAGTTCAGTGAGATGGAGCAGCAGGAGATGGCTTTGGACGCGCT
CTTTGCCTAGCTTTTGGCGTGGAGGGTGGGGCGTATGCATGGCGTAGGAA
GGGTCGAAGGCGGGCGGGCCCGTGTAACGAGGGAGGGAGAACTGTGGTCT
ATAGCTATGGGTGATATCATGTGCAGATGTATTTCCTTTAAATCACTTTA
AATAAAGCCACATCTCCACGGTTTTCCACGCGTTGCATTCGGCATAAGCA
ATTAGTGCCTGCATGAGCTGCCCCAAATTGTCTACTTGTCCCACC
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protein sequence of rna2638

>rna2638-protein ID=rna2638-protein|Name=rna2638|organism=Nannochloropsis gaditana|type=polypeptide|length=181bp
MIVPLGEERKKLHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVR
AECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPEQQNAQGIYEKG
GNWDRGSDGEGERSDEYEEAGGGDTDEGVDRGGHRGSHESQEWDILYEEG
TDAVGHGYSTGDGMEQDLKASSEPPTRPPGR
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mRNA from alignment at CM002459.1:860295..861376-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2638 ID=rna2638|Name=rna2638|organism=Nannochloropsis gaditana|type=mRNA|length=1082bp|location=Sequence derived from alignment at CM002459.1:860295..861376- (Nannochloropsis gaditana)
ATGATCGTGCCGCTAGGGGAGGAGAGGAAGAAGTTGCACGCATGGTTGCA
GCAACAACTTCGGCCCTTGAGCGAAACGAGTCCCGCTATTCTCAGTAAAT
TCGTCTTGCAGCTTCTGGATGCGGCAGACAAGGAGGAAGCGGAGGTGCGG
GCAGAATGCCTGCGGGAATTGGGTTTATATTTAGGTCAGTCCACAGTCCC
CTTCGTCGATCATCTCTTTCAAGCCTTGCGGACCGGGAGCTATCGTGAGC
TCTCGTCCGAGCCGGAGCAACAGAATGCGCAAGGGATATATGAAAAGGGC
GGTAATTGGGATCGAGGCAGTGATGGCGAGGGAGAACGGAGTGATGAATA
CGAGGAAGCCGGTGGAGGGGATACCGACGAGGGGGTAGACCGGGGTGGGC
ACCGCGGTTCGCACGAAAGCCAGGAGTGGGACATTTTGTACGAAGAGGGC
ACCGATGCCGTCGGGCATGGGTACAGCACGGGAGATGGCATGGAGCAAGA
CCTGAAGGCGTCGTCTGAGGTACAGGAGGAGGAGGATCCCTTTGCCCGGT
ACGACCGGGAGGACGCGGAGGAGGGCGCGGCCGAGGGCGGGCACCGGAGG
CGGGCCAGCAGCGATGCGACCGCGTCGTCGGACGAGGAAGACGAGCGGCA
AGGGGCGCGTCGCGGGACTCGGAGCTGGAAGAGGCGCGGGGTCCGGAGTC
GGAGCGCGAGTCCTGATCGCCGAGTGCCCCCCCCCCGGCCTCGGCAAAGC
CACCGGCCCGCGCCAGCACCAGCACAGCCGCCGTCGGGCTCTGCGCATCA
AGGACAGCCGCAGCGCCCGGCGTTCGAGAGGGGCCGGCCATCGTGGCGCG
ACGGCCGCTTCCCCCCGGGGCCAGCCGGACCTCTTCCACGGGGCTCCGCG
CCTTTCCCGCCACCGCACCCGCCAGGCGCACGCATGGACGAAGCGAGTGG
TCGTCTCGGACGGGAGGGGCGAGGTGGGGGAAGGGGGGGATGGGCGGGTG
TTGGAGGCCGGAGGGCCCCCTTTTCTCCTCACGGCCCCCCCTCGGGCGCC
TACAGCCACCCACCCGTCCCCCTGGACGGTGA
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Coding sequence (CDS) from alignment at CM002459.1:860295..861376-

>rna2638 ID=rna2638|Name=rna2638|organism=Nannochloropsis gaditana|type=CDS|length=1092bp|location=Sequence derived from alignment at CM002459.1:860295..861376- (Nannochloropsis gaditana)
CCACCCACCCGTCCCCCTGGACGGTGAATGATCGTGCCGCTAGGGGAGGA
GAGGAAGAAGTTGCACGCATGGTTGCAGCAACAACTTCGGCCCTTGAGCG
AAACGAGTCCCGCTATTCTCAGTAAATTCGTCTTGCAGCTTCTGGATGCG
GCAGACAAGGAGGAAGCGGAGGTGCGGGCAGAATGCCTGCGGGAATTGGG
TTTATATTTAGGTCAGTCCACAGTCCCCTTCGTCGATCATCTCTTTCAAG
CCTTGCGGACCGGGAGCTATCGTGAGCTCTCGTCCGAGCCGGAGCAACAG
AATGCGCAAGGGATATATGAAAAGGGCGGTAATTGGGATCGAGGCAGTGA
TGGCGAGGGAGAACGGAGTGATGAATACGAGGAAGCCGGTGGAGGGGATA
CCGACGAGGGGGTAGACCGGGGTGGGCACCGCGGTTCGCACGAAAGCCAG
GAGTGGGACATTTTGTACGAAGAGGGCACCGATGCCGTCGGGCATGGGTA
CAGCACGGGAGATGGCATGGAGCAAGACCTGAAGGCGTCGTCTGAGCCAC
CCACCCGTCCCCCTGGACGGTGAATGATCGTGCCGCTAGGGGAGGAGAGG
AAGAAGTTGCACGCATGGTTGCAGCAACAACTTCGGCCCTTGAGCGAAAC
GAGTCCCGCTATTCTCAGTAAATTCGTCTTGCAGCTTCTGGATGCGGCAG
ACAAGGAGGAAGCGGAGGTGCGGGCAGAATGCCTGCGGGAATTGGGTTTA
TATTTAGGTCAGTCCACAGTCCCCTTCGTCGATCATCTCTTTCAAGCCTT
GCGGACCGGGAGCTATCGTGAGCTCTCGTCCGAGCCGGAGCAACAGAATG
CGCAAGGGATATATGAAAAGGGCGGTAATTGGGATCGAGGCAGTGATGGC
GAGGGAGAACGGAGTGATGAATACGAGGAAGCCGGTGGAGGGGATACCGA
CGAGGGGGTAGACCGGGGTGGGCACCGCGGTTCGCACGAAAGCCAGGAGT
GGGACATTTTGTACGAAGAGGGCACCGATGCCGTCGGGCATGGGTACAGC
ACGGGAGATGGCATGGAGCAAGACCTGAAGGCGTCGTCTGAG
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Synonyms
Publications